data_DDZ # _chem_comp.id DDZ _chem_comp.name "3,3-DIHYDROXY L-ALANINE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C3 H7 N O4" _chem_comp.mon_nstd_parent_comp_id ALA _chem_comp.pdbx_synonyms 3-HYDROXY-L-SERINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-06-06 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 121.092 _chem_comp.one_letter_code A _chem_comp.three_letter_code DDZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1E33 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DDZ N N N 0 1 N N N Y Y N 20.097 36.998 -18.653 -0.146 1.897 0.349 N DDZ 1 DDZ CA CA C 0 1 N N S Y N N 20.841 37.893 -19.550 -0.047 0.437 0.485 CA DDZ 2 DDZ C C C 0 1 N N N Y N Y 20.136 39.077 -20.226 1.315 -0.019 0.031 C DDZ 3 DDZ O O O 0 1 N N N Y N Y 20.555 40.225 -20.014 1.982 0.689 -0.685 O DDZ 4 DDZ OG1 OG1 O 0 1 N N N N N N 22.354 36.038 -20.169 -1.102 -1.640 -0.156 OG1 DDZ 5 DDZ OG2 OG2 O 0 1 N N N N N N 22.064 38.048 -21.490 -2.405 0.291 -0.025 OG2 DDZ 6 DDZ CB CB C 0 1 N N N N N N 21.496 36.989 -20.688 -1.122 -0.229 -0.377 CB DDZ 7 DDZ OXT OXT O 0 1 N Y N Y N Y 19.066 38.853 -21.003 1.788 -1.212 0.423 OXT DDZ 8 DDZ H HN1 H 0 1 N N N Y Y N 19.928 36.127 -19.115 -0.012 2.180 -0.611 HN1 DDZ 9 DDZ H2 HN2 H 0 1 N Y N Y Y N 20.632 36.837 -17.824 -1.026 2.235 0.706 HN2 DDZ 10 DDZ HA HA H 0 1 N N N Y N N 21.538 38.401 -18.867 -0.195 0.159 1.528 HA DDZ 11 DDZ HB HB H 0 1 N N N N N N 20.840 36.324 -21.269 -0.922 -0.023 -1.429 HB DDZ 12 DDZ HXT HXT H 0 1 N Y N Y N Y 18.729 39.681 -21.326 2.668 -1.462 0.107 HXT DDZ 13 DDZ HG1 HG1 H 0 1 N N N N N N 22.551 35.391 -20.836 -1.273 -1.897 0.761 HG1 DDZ 14 DDZ HG2 HG2 H 0 1 N N N N N N 22.189 38.821 -20.952 -3.136 -0.087 -0.534 HG2 DDZ 15 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DDZ N CA SING N N 1 DDZ CA C SING N N 2 DDZ CA CB SING N N 3 DDZ C O DOUB N N 4 DDZ C OXT SING N N 5 DDZ OG1 CB SING N N 6 DDZ OG2 CB SING N N 7 DDZ N H SING N N 8 DDZ N H2 SING N N 9 DDZ CA HA SING N N 10 DDZ CB HB SING N N 11 DDZ OXT HXT SING N N 12 DDZ OG1 HG1 SING N N 13 DDZ OG2 HG2 SING N N 14 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DDZ SMILES ACDLabs 10.04 "O=C(O)C(N)C(O)O" DDZ SMILES_CANONICAL CACTVS 3.352 "N[C@@H](C(O)O)C(O)=O" DDZ SMILES CACTVS 3.352 "N[CH](C(O)O)C(O)=O" DDZ SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "[C@H](C(O)O)(C(=O)O)N" DDZ SMILES "OpenEye OEToolkits" 1.6.1 "C(C(O)O)(C(=O)O)N" DDZ InChI InChI 1.03 "InChI=1S/C3H7NO4/c4-1(2(5)6)3(7)8/h1-2,5-6H,4H2,(H,7,8)/t1-/m0/s1" DDZ InChIKey InChI 1.03 WBZJYDPZNNYSJU-SFOWXEAESA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DDZ "SYSTEMATIC NAME" ACDLabs 10.04 3-hydroxy-L-serine DDZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S)-2-amino-3,3-dihydroxy-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DDZ "Create component" 2000-06-06 EBI DDZ "Modify descriptor" 2011-06-04 RCSB DDZ "Other modification" 2019-04-16 PDBE DDZ "Modify synonyms" 2020-06-05 PDBE DDZ "Modify backbone" 2023-11-03 PDBE DDZ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DDZ _pdbx_chem_comp_synonyms.name 3-HYDROXY-L-SERINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id DDZ _pdbx_chem_comp_pcm.modified_residue_id ALA _pdbx_chem_comp_pcm.type Hydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #