2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
ATOMN
C10 H14 N5 O7 P
0
2001-06-01
2011-06-04
N
REL
347.221
G
DG
N
N
EBI
O3P
O
0
1
N
Y
N
1.807
-6.720
-10.410
-1.603
-1.547
5.624
OP3
DG
1
P
P
0
1
N
N
N
0.961
-7.850
-11.142
-0.818
-0.321
4.935
P
DG
2
O1P
O
0
1
N
N
N
0.170
-8.600
-10.123
-1.774
0.766
4.630
OP1
DG
3
O2P
O
0
1
N
N
N
1.852
-8.616
-12.064
0.312
0.224
5.941
OP2
DG
4
O5*
O
0
1
N
N
N
0.048
-6.954
-12.084
-0.126
-0.826
3.572
O5'
DG
5
C5*
C
0
1
N
N
N
-1.051
-6.223
-11.511
0.550
0.300
3.011
C5'
DG
6
C4*
C
0
1
N
N
R
-1.328
-5.001
-12.351
1.233
-0.113
1.706
C4'
DG
7
O4*
O
0
1
N
N
N
-0.272
-4.023
-12.145
0.253
-0.471
0.705
O4'
DG
8
C3*
C
0
1
N
N
S
-1.390
-5.229
-13.845
1.976
1.091
1.073
C3'
DG
9
O3*
O
0
1
N
N
N
-2.368
-4.320
-14.370
3.294
1.218
1.612
O3'
DG
10
C2*
C
0
1
N
N
N
0.027
-4.903
-14.329
2.026
0.692
-0.421
C2'
DG
11
C1*
C
0
1
N
N
R
0.517
-3.869
-13.327
0.897
-0.345
-0.573
C1'
DG
12
N9
N
0
1
Y
N
N
1.928
-3.987
-12.970
-0.068
0.111
-1.575
N9
DG
13
C8
C
0
1
Y
N
N
2.740
-5.108
-12.939
-1.172
0.877
-1.341
C8
DG
14
N7
N
0
1
Y
N
N
3.900
-4.878
-12.390
-1.804
1.094
-2.458
N7
DG
15
C5
C
0
1
Y
N
N
3.852
-3.557
-12.017
-1.145
0.482
-3.472
C5
DG
16
C6
C
0
1
N
N
N
4.809
-2.738
-11.336
-1.361
0.377
-4.866
C6
DG
17
O6
O
0
1
N
N
N
5.900
-3.103
-10.856
-2.321
0.914
-5.391
O6
DG
18
N1
N
0
1
N
N
N
4.384
-1.424
-11.224
-0.473
-0.327
-5.601
N1
DG
19
C2
C
0
1
N
N
N
3.153
-0.949
-11.650
0.593
-0.928
-5.003
C2
DG
20
N2
N
0
1
N
N
N
2.928
0.356
-11.439
1.474
-1.643
-5.774
N2
DG
21
N3
N
0
1
N
N
N
2.236
-1.721
-12.198
0.804
-0.839
-3.709
N3
DG
22
C4
C
0
1
Y
N
N
2.641
-2.992
-12.372
-0.027
-0.152
-2.917
C4
DG
23
3HOP
H
0
0
N
N
N
2.310
-6.242
-11.058
-2.002
-1.203
6.435
HOP3
DG
24
2HOP
H
0
0
N
N
N
2.355
-8.138
-12.712
0.913
-0.513
6.114
HOP2
DG
25
1H5*
H
0
1
N
N
N
-1.957
-6.858
-11.377
1.299
0.661
3.715
H5'
DG
26
2H5*
H
0
0
N
N
N
-0.876
-5.968
-10.439
-0.170
1.093
2.808
H5''
DG
27
H4*
H
0
1
N
N
N
-2.337
-4.666
-12.015
1.921
-0.940
1.879
H4'
DG
28
H3*
H
0
1
N
N
N
-1.682
-6.257
-14.160
1.411
2.013
1.211
H3'
DG
29
H3T
H
0
0
N
Y
N
-2.406
-4.463
-15.308
3.732
1.921
1.114
HO3'
DG
30
1H2*
H
0
1
N
N
N
0.692
-5.790
-14.439
2.990
0.246
-0.665
H2'
DG
31
2H2*
H
0
0
N
N
N
0.087
-4.578
-15.394
1.834
1.559
-1.053
H2''
DG
32
H1*
H
0
1
N
N
N
0.410
-2.866
-13.803
1.316
-1.306
-0.873
H1'
DG
33
H8
H
0
1
N
N
N
2.482
-6.109
-13.322
-1.477
1.248
-0.373
H8
DG
34
H1
H
0
1
N
N
N
5.025
-0.756
-10.795
-0.601
-0.413
-6.559
H1
DG
35
1H2
H
0
1
N
N
N
2.022
0.705
-11.752
2.240
-2.073
-5.363
H21
DG
36
2H2
H
0
1
N
N
N
3.677
0.909
-11.854
1.329
-1.722
-6.730
H22
DG
37
sing
N
N
1
sing
N
N
2
doub
N
N
3
sing
N
N
4
sing
N
N
5
sing
N
N
6
sing
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
Y
N
24
sing
Y
N
25
doub
Y
N
26
sing
N
N
27
sing
Y
N
28
sing
N
N
29
doub
Y
N
30
doub
N
N
31
sing
N
N
32
sing
N
N
33
sing
N
N
34
sing
N
N
35
doub
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3)COP(=O)(O)O
NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N=C(NC2=O)N
c1nc2c(n1C3CC(C(O3)COP(=O)(O)O)O)N=C(NC2=O)N
InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
LTFMZDNNPPEQNG-KVQBGUIXSA-N
2'-deoxy-5'-guanylic acid
[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate
EBI
RCSB