data_DGB
#
_chem_comp.id DGB
_chem_comp.name "(2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H29 N3 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms FK-866
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-03-09
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 391.506
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code DGB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2G97
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DGB OAA OAA O 0 1 N N N 2.503 97.671 17.164 -4.329 -0.900 1.651 OAA DGB 1
DGB OAB OAB O 0 1 N N N -5.957 103.053 13.135 7.398 1.584 -0.626 OAB DGB 2
DGB CAC CAC C 0 1 N N N 4.310 98.154 15.916 -5.818 -0.057 0.076 CAC DGB 3
DGB CAD CAD C 0 1 N N N 4.912 97.568 14.815 -6.867 -0.713 0.612 CAD DGB 4
DGB CAE CAE C 0 1 Y N N -4.377 104.269 8.461 7.644 -3.374 -0.422 CAE DGB 5
DGB CAF CAF C 0 1 Y N N -3.485 103.421 9.110 7.209 -2.833 0.775 CAF DGB 6
DGB CAG CAG C 0 1 Y N N -5.460 104.804 9.156 7.748 -2.580 -1.550 CAG DGB 7
DGB CAH CAH C 0 1 Y N N 8.217 96.581 13.501 -10.540 -1.087 -0.042 CAH DGB 8
DGB CAI CAI C 0 1 Y N N 9.044 97.157 14.460 -10.650 -0.271 -1.153 CAI DGB 9
DGB CAJ CAJ C 0 1 Y N N 6.841 96.772 13.591 -9.305 -1.251 0.560 CAJ DGB 10
DGB CAK CAK C 0 1 Y N N -3.674 103.115 10.456 6.877 -1.496 0.850 CAK DGB 11
DGB CAL CAL C 0 1 Y N N -5.653 104.497 10.498 7.419 -1.241 -1.488 CAL DGB 12
DGB CAM CAM C 0 1 Y N N 7.200 98.040 15.564 -8.401 0.232 -1.112 CAM DGB 13
DGB CAN CAN C 0 1 N N N 1.884 101.221 14.514 -1.105 1.164 -0.061 CAN DGB 14
DGB CAO CAO C 0 1 N N N 0.366 101.273 14.731 0.286 1.020 0.561 CAO DGB 15
DGB CAP CAP C 0 1 N N N 2.440 99.816 14.267 -2.108 0.324 0.732 CAP DGB 16
DGB CAQ CAQ C 0 1 N N N -0.032 102.624 15.334 1.289 1.860 -0.232 CAQ DGB 17
DGB CAR CAR C 0 1 N N N -2.606 102.552 15.310 3.657 2.652 -0.325 CAR DGB 18
DGB CAS CAS C 0 1 N N N -1.360 103.428 13.314 3.156 0.270 0.246 CAS DGB 19
DGB CAT CAT C 0 1 N N N -3.858 103.336 14.896 5.039 2.532 0.324 CAT DGB 20
DGB CAU CAU C 0 1 N N N -2.592 104.232 12.891 4.533 0.123 0.901 CAU DGB 21
DGB NAV NAV N 0 1 Y N N 8.511 97.867 15.441 -9.598 0.354 -1.647 NAV DGB 22
DGB NAW NAW N 0 1 N N N 2.099 98.968 15.426 -3.439 0.461 0.136 NAW DGB 23
DGB CAX CAX C 0 1 N N N 2.928 98.247 16.159 -4.488 -0.194 0.672 CAX DGB 24
DGB CAY CAY C 0 1 N N N -4.880 103.403 12.654 6.624 0.744 -0.210 CAY DGB 25
DGB CAZ CAZ C 0 1 Y N N 6.305 97.507 14.648 -8.205 -0.575 0.013 CAZ DGB 26
DGB CBA CBA C 0 1 Y N N -4.752 103.654 11.149 6.979 -0.689 -0.284 CBA DGB 27
DGB CBB CBB C 0 1 N N N -1.334 103.264 14.836 2.679 1.717 0.391 CBB DGB 28
DGB NBC NBC N 0 1 N N N -3.820 103.610 13.439 5.443 1.119 0.319 NBC DGB 29
DGB HAC HAC H 0 1 N N N 4.966 98.581 16.660 -5.958 0.565 -0.795 HAC DGB 30
DGB HAD HAD H 0 1 N N N 4.282 97.139 14.050 -6.727 -1.339 1.480 HAD DGB 31
DGB HAE HAE H 0 1 N N N -4.230 104.512 7.419 7.907 -4.420 -0.475 HAE DGB 32
DGB HAF HAF H 0 1 N N N -2.648 103.001 8.572 7.129 -3.458 1.651 HAF DGB 33
DGB HAG HAG H 0 1 N N N -6.153 105.460 8.650 8.089 -3.008 -2.481 HAG DGB 34
DGB HAH HAH H 0 1 N N N 8.637 95.994 12.698 -11.410 -1.589 0.355 HAH DGB 35
DGB HAI HAI H 0 1 N N N 10.114 97.025 14.404 -11.613 -0.142 -1.624 HAI DGB 36
DGB HAJ HAJ H 0 1 N N N 6.188 96.350 12.841 -9.191 -1.882 1.429 HAJ DGB 37
DGB HAK HAK H 0 1 N N N -2.982 102.458 10.962 6.537 -1.075 1.785 HAK DGB 38
DGB HAL HAL H 0 1 N N N -6.496 104.909 11.034 7.501 -0.622 -2.369 HAL DGB 39
DGB HAM HAM H 0 1 N N N 6.821 98.611 16.399 -7.564 0.759 -1.546 HAM DGB 40
DGB HAN HAN H 0 1 N N N 2.129 101.846 13.642 -1.408 2.210 -0.037 HAN DGB 41
DGB HANA HANA H 0 0 N N N 2.374 101.632 15.409 -1.077 0.817 -1.094 HANA DGB 42
DGB HAO HAO H 0 1 N N N -0.145 101.141 13.766 0.259 1.367 1.594 HAO DGB 43
DGB HAOA HAOA H 0 0 N N N 0.068 100.466 15.417 0.589 -0.026 0.537 HAOA DGB 44
DGB HAP HAP H 0 1 N N N 1.993 99.395 13.355 -1.805 -0.723 0.708 HAP DGB 45
DGB HAPA HAPA H 0 0 N N N 3.533 99.864 14.151 -2.135 0.670 1.765 HAPA DGB 46
DGB HAQ HAQ H 0 1 N N N -0.128 102.485 16.421 1.316 1.514 -1.265 HAQ DGB 47
DGB HAQA HAQA H 0 0 N N N 0.784 103.331 15.125 0.986 2.907 -0.208 HAQA DGB 48
DGB HAR HAR H 0 1 N N N -2.582 102.464 16.406 3.304 3.680 -0.241 HAR DGB 49
DGB HARA HARA H 0 0 N N N -2.645 101.548 14.862 3.723 2.374 -1.377 HARA DGB 50
DGB HAS HAS H 0 1 N N N -1.394 102.435 12.842 3.227 0.014 -0.812 HAS DGB 51
DGB HASA HASA H 0 0 N N N -0.452 103.957 12.990 2.447 -0.397 0.735 HASA DGB 52
DGB HAT HAT H 0 1 N N N -4.754 102.744 15.133 5.761 3.120 -0.243 HAT DGB 53
DGB HATA HATA H 0 0 N N N -3.891 104.288 15.446 4.995 2.895 1.350 HATA DGB 54
DGB HAU HAU H 0 1 N N N -2.504 105.260 13.272 4.447 0.290 1.974 HAU DGB 55
DGB HAUA HAUA H 0 0 N N N -2.654 104.252 11.793 4.921 -0.879 0.715 HAUA DGB 56
DGB HNAW HNAW H 0 0 N N N 1.134 98.936 15.685 -3.565 1.023 -0.644 HNAW DGB 57
DGB HBB HBB H 0 1 N N N -1.366 104.278 15.261 2.632 1.980 1.447 HBB DGB 58
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DGB OAA CAX DOUB N N 1
DGB OAB CAY DOUB N N 2
DGB CAC CAD DOUB N E 3
DGB CAC CAX SING N N 4
DGB CAD CAZ SING N N 5
DGB CAE CAF DOUB Y N 6
DGB CAE CAG SING Y N 7
DGB CAF CAK SING Y N 8
DGB CAG CAL DOUB Y N 9
DGB CAH CAI DOUB Y N 10
DGB CAH CAJ SING Y N 11
DGB CAI NAV SING Y N 12
DGB CAJ CAZ DOUB Y N 13
DGB CAK CBA DOUB Y N 14
DGB CAL CBA SING Y N 15
DGB CAM NAV DOUB Y N 16
DGB CAM CAZ SING Y N 17
DGB CAN CAO SING N N 18
DGB CAN CAP SING N N 19
DGB CAO CAQ SING N N 20
DGB CAP NAW SING N N 21
DGB CAQ CBB SING N N 22
DGB CAR CAT SING N N 23
DGB CAR CBB SING N N 24
DGB CAS CAU SING N N 25
DGB CAS CBB SING N N 26
DGB CAT NBC SING N N 27
DGB CAU NBC SING N N 28
DGB NAW CAX SING N N 29
DGB CAY CBA SING N N 30
DGB CAY NBC SING N N 31
DGB CAC HAC SING N N 32
DGB CAD HAD SING N N 33
DGB CAE HAE SING N N 34
DGB CAF HAF SING N N 35
DGB CAG HAG SING N N 36
DGB CAH HAH SING N N 37
DGB CAI HAI SING N N 38
DGB CAJ HAJ SING N N 39
DGB CAK HAK SING N N 40
DGB CAL HAL SING N N 41
DGB CAM HAM SING N N 42
DGB CAN HAN SING N N 43
DGB CAN HANA SING N N 44
DGB CAO HAO SING N N 45
DGB CAO HAOA SING N N 46
DGB CAP HAP SING N N 47
DGB CAP HAPA SING N N 48
DGB CAQ HAQ SING N N 49
DGB CAQ HAQA SING N N 50
DGB CAR HAR SING N N 51
DGB CAR HARA SING N N 52
DGB CAS HAS SING N N 53
DGB CAS HASA SING N N 54
DGB CAT HAT SING N N 55
DGB CAT HATA SING N N 56
DGB CAU HAU SING N N 57
DGB CAU HAUA SING N N 58
DGB NAW HNAW SING N N 59
DGB CBB HBB SING N N 60
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DGB SMILES ACDLabs 12.01 "O=C(/C=C/c1cccnc1)NCCCCC2CCN(CC2)C(=O)c3ccccc3"
DGB InChI InChI 1.03 "InChI=1S/C24H29N3O2/c28-23(12-11-21-8-6-15-25-19-21)26-16-5-4-7-20-13-17-27(18-14-20)24(29)22-9-2-1-3-10-22/h1-3,6,8-12,15,19-20H,4-5,7,13-14,16-18H2,(H,26,28)/b12-11+"
DGB InChIKey InChI 1.03 KPBNHDGDUADAGP-VAWYXSNFSA-N
DGB SMILES_CANONICAL CACTVS 3.385 "O=C(NCCCCC1CCN(CC1)C(=O)c2ccccc2)\C=C\c3cccnc3"
DGB SMILES CACTVS 3.385 "O=C(NCCCCC1CCN(CC1)C(=O)c2ccccc2)C=Cc3cccnc3"
DGB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C(=O)N2CCC(CC2)CCCCNC(=O)/C=C/c3cccnc3"
DGB SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C(=O)N2CCC(CC2)CCCCNC(=O)C=Cc3cccnc3"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DGB "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide"
DGB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(E)-N-[4-[1-(phenylcarbonyl)piperidin-4-yl]butyl]-3-pyridin-3-yl-prop-2-enamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DGB "Create component" 2006-03-09 RCSB
DGB "Modify descriptor" 2011-06-04 RCSB
DGB "Modify name" 2016-10-31 PDBJ
DGB "Modify value order" 2016-10-31 PDBJ
DGB "Other modification" 2016-10-31 PDBJ
DGB "Modify synonyms" 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id DGB
_pdbx_chem_comp_synonyms.name FK-866
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##