data_DGL # _chem_comp.id DGL _chem_comp.name "D-GLUTAMIC ACID" _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H9 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-07 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 147.129 _chem_comp.one_letter_code E _chem_comp.three_letter_code DGL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CZQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DGL N N N 0 1 N N N Y Y N 15.813 -4.736 28.474 -1.198 1.861 -0.122 N DGL 1 DGL CA CA C 0 1 N N R Y N N 14.782 -5.702 28.834 -1.130 0.510 0.451 CA DGL 2 DGL C C C 0 1 N N N Y N Y 14.875 -6.180 30.276 -2.352 -0.272 0.040 C DGL 3 DGL O O O 0 1 N N N Y N Y 14.832 -7.381 30.553 -2.999 0.079 -0.918 O DGL 4 DGL CB CB C 0 1 N N N N N N 13.397 -5.090 28.574 0.125 -0.199 -0.062 CB DGL 5 DGL CG CG C 0 1 N N N N N N 13.060 -4.844 27.093 1.368 0.525 0.460 CG DGL 6 DGL CD CD C 0 1 N N N N N N 13.663 -3.568 26.500 2.605 -0.173 -0.045 CD DGL 7 DGL OE1 OE1 O 0 1 N N N N N N 14.422 -2.859 27.182 2.502 -1.149 -0.750 OE1 DGL 8 DGL OE2 OE2 O 0 1 N N N N N N 13.367 -3.264 25.323 3.820 0.290 0.289 OE2 DGL 9 DGL OXT OXT O 0 1 N Y N Y N Y 15.022 -5.237 31.196 -2.720 -1.357 0.738 OXT DGL 10 DGL H H H 0 1 N N N Y Y N 15.696 -4.464 27.519 -1.236 1.826 -1.129 H DGL 11 DGL H2 HN2 H 0 1 N Y N Y Y N 15.735 -3.931 29.062 -1.984 2.373 0.252 H2 DGL 12 DGL HA HA H 0 1 N N N Y N N 14.940 -6.589 28.203 -1.091 0.577 1.538 HA DGL 13 DGL HB2 HB1 H 0 1 N N N N N N 12.645 -5.785 28.976 0.130 -1.230 0.291 HB2 DGL 14 DGL HB3 HB2 H 0 1 N N N N N N 13.359 -4.119 29.090 0.129 -0.188 -1.152 HB3 DGL 15 DGL HG2 HG1 H 0 1 N N N N N N 13.446 -5.697 26.516 1.363 1.556 0.107 HG2 DGL 16 DGL HG3 HG2 H 0 1 N N N N N N 11.966 -4.769 27.006 1.364 0.514 1.550 HG3 DGL 17 DGL HE2 HE2 H 0 1 N N N N N N 13.804 -2.455 25.085 4.583 -0.191 -0.059 HE2 DGL 18 DGL HXT HXT H 0 1 N Y N Y N Y 15.084 -5.639 32.055 -3.510 -1.826 0.436 HXT DGL 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DGL N CA SING N N 1 DGL N H SING N N 2 DGL N H2 SING N N 3 DGL CA C SING N N 4 DGL CA CB SING N N 5 DGL CA HA SING N N 6 DGL C O DOUB N N 7 DGL C OXT SING N N 8 DGL CB CG SING N N 9 DGL CB HB2 SING N N 10 DGL CB HB3 SING N N 11 DGL CG CD SING N N 12 DGL CG HG2 SING N N 13 DGL CG HG3 SING N N 14 DGL CD OE1 DOUB N N 15 DGL CD OE2 SING N N 16 DGL OE2 HE2 SING N N 17 DGL OXT HXT SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DGL SMILES ACDLabs 12.01 "O=C(O)C(N)CCC(=O)O" DGL SMILES_CANONICAL CACTVS 3.370 "N[C@H](CCC(O)=O)C(O)=O" DGL SMILES CACTVS 3.370 "N[CH](CCC(O)=O)C(O)=O" DGL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C(CC(=O)O)[C@H](C(=O)O)N" DGL SMILES "OpenEye OEToolkits" 1.7.0 "C(CC(=O)O)C(C(=O)O)N" DGL InChI InChI 1.03 "InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m1/s1" DGL InChIKey InChI 1.03 WHUUTDBJXJRKMK-GSVOUGTGSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DGL "SYSTEMATIC NAME" ACDLabs 12.01 "D-glutamic acid" DGL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-azanylpentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DGL "Create component" 1999-07-07 RCSB DGL "Modify leaving atom flag" 2011-01-28 RCSB DGL "Modify descriptor" 2011-06-04 RCSB DGL "Modify backbone" 2023-11-03 PDBE #