data_DH1 # _chem_comp.id DH1 _chem_comp.name "2,4-DIAMINO-5-[2-METHOXY-5-(4-CARBOXYBUTYLOXY)BENZYL]PYRIMIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H22 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-02-15 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 346.381 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DH1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2FZH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DH1 C16 C16 C 0 1 N N N 34.314 8.899 14.289 2.106 3.836 0.924 C16 DH1 1 DH1 O1 O1 O 0 1 N N N 33.420 8.299 13.331 2.592 2.800 0.068 O1 DH1 2 DH1 "C2'" "C2'" C 0 1 Y N N 33.169 9.069 12.183 1.537 1.986 -0.202 "C2'" DH1 3 DH1 "C3'" "C3'" C 0 1 Y N N 34.223 9.363 11.270 0.290 2.264 0.339 "C3'" DH1 4 DH1 "C4'" "C4'" C 0 1 Y N N 34.010 10.138 10.093 -0.782 1.437 0.064 "C4'" DH1 5 DH1 "C5'" "C5'" C 0 1 Y N N 32.723 10.613 9.843 -0.611 0.329 -0.753 "C5'" DH1 6 DH1 "O5'" "O5'" O 0 1 N N N 32.519 11.373 8.679 -1.667 -0.485 -1.023 "O5'" DH1 7 DH1 C52 C52 C 0 1 N N N 31.836 12.642 8.865 -2.794 0.057 -0.332 C52 DH1 8 DH1 C1 C1 C 0 1 N N N 32.061 13.530 7.603 -4.022 -0.817 -0.595 C1 DH1 9 DH1 C3 C3 C 0 1 N N N 32.020 12.769 6.231 -5.229 -0.236 0.145 C3 DH1 10 DH1 C7 C7 C 0 1 N N N 30.675 12.124 5.880 -6.457 -1.110 -0.119 C7 DH1 11 DH1 C8 C8 C 0 1 N N N 29.505 13.072 6.027 -7.646 -0.539 0.610 C8 DH1 12 DH1 O9 O9 O 0 1 N N N 29.441 14.082 5.338 -8.841 -1.144 0.523 O9 DH1 13 DH1 O10 O10 O 0 1 N N N 28.616 12.827 6.833 -7.523 0.465 1.272 O10 DH1 14 DH1 "C6'" "C6'" C 0 1 Y N N 31.625 10.328 10.747 0.635 0.051 -1.294 "C6'" DH1 15 DH1 "C1'" "C1'" C 0 1 Y N N 31.848 9.551 11.920 1.706 0.881 -1.024 "C1'" DH1 16 DH1 C51 C51 C 0 1 N N N 30.712 9.213 12.917 3.060 0.580 -1.612 C51 DH1 17 DH1 C5 C5 C 0 1 Y N N 29.951 7.883 12.648 3.877 -0.203 -0.617 C5 DH1 18 DH1 C6 C6 C 0 1 Y N N 30.220 6.996 11.562 4.759 0.438 0.232 C6 DH1 19 DH1 N1 N1 N 0 1 Y N N 29.500 5.830 11.395 5.463 -0.279 1.096 N1 DH1 20 DH1 C2 C2 C 0 1 Y N N 28.513 5.476 12.248 5.331 -1.596 1.156 C2 DH1 21 DH1 N2 N2 N 0 1 N N N 27.790 4.272 12.057 6.084 -2.308 2.072 N2 DH1 22 DH1 N3 N3 N 0 1 Y N N 28.203 6.269 13.300 4.497 -2.247 0.360 N3 DH1 23 DH1 C4 C4 C 0 1 Y N N 28.902 7.488 13.532 3.756 -1.591 -0.527 C4 DH1 24 DH1 N4 N4 N 0 1 N N N 28.573 8.228 14.561 2.884 -2.275 -1.358 N4 DH1 25 DH1 H161 1H16 H 0 0 N N N 34.417 8.235 15.160 2.921 4.517 1.169 H161 DH1 26 DH1 H162 2H16 H 0 0 N N N 33.907 9.868 14.613 1.314 4.385 0.415 H162 DH1 27 DH1 H163 3H16 H 0 0 N N N 35.300 9.052 13.826 1.712 3.396 1.840 H163 DH1 28 DH1 "H3'" "H3'" H 0 1 N N N 35.214 8.987 11.476 0.158 3.126 0.975 "H3'" DH1 29 DH1 "H4'" "H4'" H 0 1 N N N 34.822 10.351 9.414 -1.752 1.653 0.486 "H4'" DH1 30 DH1 H521 1H52 H 0 0 N N N 32.236 13.152 9.754 -2.587 0.080 0.738 H521 DH1 31 DH1 H522 2H52 H 0 0 N N N 30.759 12.465 9.005 -2.985 1.070 -0.687 H522 DH1 32 DH1 H11 1H1 H 0 1 N N N 33.076 13.943 7.695 -4.229 -0.840 -1.665 H11 DH1 33 DH1 H12 2H1 H 0 1 N N N 31.265 14.290 7.585 -3.831 -1.829 -0.241 H12 DH1 34 DH1 H31 1H3 H 0 1 N N N 32.744 11.945 6.315 -5.022 -0.213 1.215 H31 DH1 35 DH1 H32 2H3 H 0 1 N N N 32.256 13.497 5.440 -5.420 0.776 -0.210 H32 DH1 36 DH1 H71 1H7 H 0 1 N N N 30.515 11.292 6.582 -6.664 -1.133 -1.189 H71 DH1 37 DH1 H72 2H7 H 0 1 N N N 30.717 11.787 4.834 -6.266 -2.123 0.236 H72 DH1 38 DH1 HO9 HO9 H 0 1 N N N 28.648 14.561 5.550 -9.603 -0.777 0.991 HO9 DH1 39 DH1 "H6'" "H6'" H 0 1 N N N 30.637 10.706 10.530 0.767 -0.811 -1.930 "H6'" DH1 40 DH1 H511 1H51 H 0 0 N N N 29.967 10.015 12.811 2.938 -0.006 -2.523 H511 DH1 41 DH1 H512 2H51 H 0 0 N N N 31.163 9.138 13.918 3.570 1.514 -1.847 H512 DH1 42 DH1 H6 H6 H 0 1 N N N 31.001 7.242 10.858 4.874 1.511 0.191 H6 DH1 43 DH1 HN21 1HN2 H 0 0 N N N 27.941 3.618 11.316 6.699 -1.843 2.661 HN21 DH1 44 DH1 HN22 2HN2 H 0 0 N N N 27.106 4.179 12.780 5.997 -3.273 2.126 HN22 DH1 45 DH1 HN41 1HN4 H 0 0 N N N 27.855 8.023 15.226 2.810 -3.240 -1.295 HN41 DH1 46 DH1 HN42 2HN4 H 0 0 N N N 29.165 9.034 14.566 2.347 -1.789 -2.003 HN42 DH1 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DH1 C16 O1 SING N N 1 DH1 C16 H161 SING N N 2 DH1 C16 H162 SING N N 3 DH1 C16 H163 SING N N 4 DH1 O1 "C2'" SING N N 5 DH1 "C2'" "C3'" DOUB Y N 6 DH1 "C2'" "C1'" SING Y N 7 DH1 "C3'" "C4'" SING Y N 8 DH1 "C3'" "H3'" SING N N 9 DH1 "C4'" "C5'" DOUB Y N 10 DH1 "C4'" "H4'" SING N N 11 DH1 "C5'" "O5'" SING N N 12 DH1 "C5'" "C6'" SING Y N 13 DH1 "O5'" C52 SING N N 14 DH1 C52 C1 SING N N 15 DH1 C52 H521 SING N N 16 DH1 C52 H522 SING N N 17 DH1 C1 C3 SING N N 18 DH1 C1 H11 SING N N 19 DH1 C1 H12 SING N N 20 DH1 C3 C7 SING N N 21 DH1 C3 H31 SING N N 22 DH1 C3 H32 SING N N 23 DH1 C7 C8 SING N N 24 DH1 C7 H71 SING N N 25 DH1 C7 H72 SING N N 26 DH1 C8 O9 SING N N 27 DH1 C8 O10 DOUB N N 28 DH1 O9 HO9 SING N N 29 DH1 "C6'" "C1'" DOUB Y N 30 DH1 "C6'" "H6'" SING N N 31 DH1 "C1'" C51 SING N N 32 DH1 C51 C5 SING N N 33 DH1 C51 H511 SING N N 34 DH1 C51 H512 SING N N 35 DH1 C5 C6 DOUB Y N 36 DH1 C5 C4 SING Y N 37 DH1 C6 N1 SING Y N 38 DH1 C6 H6 SING N N 39 DH1 N1 C2 DOUB Y N 40 DH1 C2 N2 SING N N 41 DH1 C2 N3 SING Y N 42 DH1 N2 HN21 SING N N 43 DH1 N2 HN22 SING N N 44 DH1 N3 C4 DOUB Y N 45 DH1 C4 N4 SING N N 46 DH1 N4 HN41 SING N N 47 DH1 N4 HN42 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DH1 SMILES ACDLabs 10.04 "O=C(O)CCCCOc1cc(c(OC)cc1)Cc2cnc(nc2N)N" DH1 SMILES_CANONICAL CACTVS 3.341 "COc1ccc(OCCCCC(O)=O)cc1Cc2cnc(N)nc2N" DH1 SMILES CACTVS 3.341 "COc1ccc(OCCCCC(O)=O)cc1Cc2cnc(N)nc2N" DH1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COc1ccc(cc1Cc2cnc(nc2N)N)OCCCCC(=O)O" DH1 SMILES "OpenEye OEToolkits" 1.5.0 "COc1ccc(cc1Cc2cnc(nc2N)N)OCCCCC(=O)O" DH1 InChI InChI 1.03 "InChI=1S/C17H22N4O4/c1-24-14-6-5-13(25-7-3-2-4-15(22)23)9-11(14)8-12-10-20-17(19)21-16(12)18/h5-6,9-10H,2-4,7-8H2,1H3,(H,22,23)(H4,18,19,20,21)" DH1 InChIKey InChI 1.03 ALDCXILJAYAUTH-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DH1 "SYSTEMATIC NAME" ACDLabs 10.04 "5-{3-[(2,4-diaminopyrimidin-5-yl)methyl]-4-methoxyphenoxy}pentanoic acid" DH1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "5-[3-[(2,4-diaminopyrimidin-5-yl)methyl]-4-methoxy-phenoxy]pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DH1 "Create component" 2006-02-15 RCSB DH1 "Modify descriptor" 2011-06-04 RCSB #