data_DHV # _chem_comp.id DHV _chem_comp.name 3-hydroxy-D-valine _chem_comp.type "D-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H11 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms D-beta-hydroxyvaline _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-06-03 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 133.146 _chem_comp.one_letter_code V _chem_comp.three_letter_code DHV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2RPL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DHV N N N 0 1 N N N Y Y N 2.054 -2.803 -3.074 0.070 1.892 0.525 N DHV 1 DHV CA CA C 0 1 N N R Y N N 2.333 -4.173 -2.683 -0.077 0.438 0.681 CA DHV 2 DHV CB CB C 0 1 N N N N N N 2.265 -5.103 -3.917 1.060 -0.271 -0.057 CB DHV 3 DHV CG1 CG1 C 0 1 N N N N N N 3.384 -4.766 -4.918 2.403 0.172 0.528 CG1 DHV 4 DHV CG2 CG2 C 0 1 N N N N N N 2.441 -6.570 -3.517 0.907 -1.785 0.106 CG2 DHV 5 DHV OG3 OG3 O 0 1 N N N N N N 1.029 -4.953 -4.590 1.010 0.066 -1.445 OG3 DHV 6 DHV C C C 0 1 N N N Y N Y 1.390 -4.528 -1.539 -1.399 0.002 0.105 C DHV 7 DHV O O O 0 1 N N N Y N Y 0.189 -4.680 -1.782 -1.975 0.709 -0.688 O DHV 8 DHV OXT OXT O 0 1 N Y N Y N Y 1.905 -4.584 -0.309 -1.937 -1.171 0.474 OXT DHV 9 DHV H H H 0 1 N N N Y Y N 1.990 -2.229 -2.257 0.920 2.218 0.961 H DHV 10 DHV H2 H2 H 0 1 N Y N Y Y N 2.791 -2.467 -3.660 0.038 2.156 -0.448 H2 DHV 11 DHV HA HA H 0 1 N N N Y N N 3.357 -4.304 -2.304 -0.039 0.181 1.740 HA DHV 12 DHV HG11 HG11 H 0 0 N N N N N N 2.960 -4.686 -5.930 2.441 -0.086 1.586 HG11 DHV 13 DHV HG12 HG12 H 0 0 N N N N N N 3.850 -3.809 -4.639 3.213 -0.334 0.002 HG12 DHV 14 DHV HG13 HG13 H 0 0 N N N N N N 4.143 -5.562 -4.901 2.512 1.250 0.412 HG13 DHV 15 DHV HG21 HG21 H 0 0 N N N N N N 2.483 -7.195 -4.421 -0.049 -2.100 -0.311 HG21 DHV 16 DHV HG22 HG22 H 0 0 N N N N N N 3.375 -6.685 -2.948 1.717 -2.290 -0.420 HG22 DHV 17 DHV HG23 HG23 H 0 0 N N N N N N 1.591 -6.884 -2.894 0.945 -2.042 1.164 HG23 DHV 18 DHV HOG3 HOG3 H 0 0 N N N N N N 0.324 -4.919 -3.954 1.704 -0.350 -1.976 HOG3 DHV 19 DHV HXT HXT H 0 1 N Y N Y N Y 1.212 -4.754 0.318 -2.787 -1.408 0.078 HXT DHV 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DHV N CA SING N N 1 DHV CA CB SING N N 2 DHV CA C SING N N 3 DHV CB CG1 SING N N 4 DHV CB CG2 SING N N 5 DHV CB OG3 SING N N 6 DHV C O DOUB N N 7 DHV C OXT SING N N 8 DHV N H SING N N 9 DHV N H2 SING N N 10 DHV CA HA SING N N 11 DHV CG1 HG11 SING N N 12 DHV CG1 HG12 SING N N 13 DHV CG1 HG13 SING N N 14 DHV CG2 HG21 SING N N 15 DHV CG2 HG22 SING N N 16 DHV CG2 HG23 SING N N 17 DHV OG3 HOG3 SING N N 18 DHV OXT HXT SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DHV SMILES ACDLabs 10.04 "O=C(O)C(N)C(O)(C)C" DHV SMILES_CANONICAL CACTVS 3.341 "CC(C)(O)[C@@H](N)C(O)=O" DHV SMILES CACTVS 3.341 "CC(C)(O)[CH](N)C(O)=O" DHV SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)([C@H](C(=O)O)N)O" DHV SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(C(C(=O)O)N)O" DHV InChI InChI 1.03 "InChI=1S/C5H11NO3/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m0/s1" DHV InChIKey InChI 1.03 LDRFQSZFVGJGGP-VKHMYHEASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DHV "SYSTEMATIC NAME" ACDLabs 10.04 3-hydroxy-D-valine DHV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R)-2-amino-3-hydroxy-3-methyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DHV "Create component" 2008-06-03 PDBJ DHV "Modify descriptor" 2011-06-04 RCSB DHV "Modify synonyms" 2021-03-01 PDBE DHV "Modify backbone" 2023-11-03 PDBE DHV "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DHV _pdbx_chem_comp_synonyms.name D-beta-hydroxyvaline _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id DHV _pdbx_chem_comp_pcm.modified_residue_id DVA _pdbx_chem_comp_pcm.type Hydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession PTM-0694 _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #