data_DIX # _chem_comp.id DIX _chem_comp.name "METHYL(CYCLOPENTYL-PROPYL)AMINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H19 N" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 141.254 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DIX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1A1C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DIX N N N 0 1 N N N Y Y N 41.779 -9.616 44.813 0.516 -0.228 3.501 N DIX 1 DIX CM CM C 0 1 N N N N N N 43.050 -10.198 45.210 -0.024 0.377 4.725 CM DIX 2 DIX C3 C3 C 0 1 N N N N N N 40.666 -9.981 45.690 -0.368 0.180 2.402 C3 DIX 3 DIX C2 C2 C 0 1 N N N N N N 40.743 -9.177 47.016 0.139 -0.418 1.089 C2 DIX 4 DIX C1 C1 C 0 1 N N N N N N 40.445 -7.697 46.996 -0.781 0.007 -0.055 C1 DIX 5 DIX "C1'" "C1'" C 0 1 N N N N N N 40.652 -7.101 48.347 -0.273 -0.591 -1.368 "C1'" DIX 6 DIX "C2'" "C2'" C 0 1 N N N N N N 40.480 -5.646 48.467 -1.190 -0.171 -2.530 "C2'" DIX 7 DIX "C5'" "C5'" C 0 1 N N N N N N 41.970 -7.431 48.971 1.130 -0.039 -1.693 "C5'" DIX 8 DIX "C4'" "C4'" C 0 1 N N N N N N 42.181 -6.270 49.925 1.126 0.125 -3.233 "C4'" DIX 9 DIX "C3'" "C3'" C 0 1 N N N N N N 40.944 -5.467 49.872 -0.312 0.621 -3.520 "C3'" DIX 10 DIX HN HN H 0 1 N Y N Y Y N 41.564 -9.847 43.843 1.410 0.208 3.332 HN DIX 11 DIX HM1 1HM H 0 1 N N N N N N 43.898 -9.919 44.541 0.600 0.101 5.574 HM1 DIX 12 DIX HM2 2HM H 0 1 N N N N N N 43.284 -9.944 46.270 -0.035 1.462 4.620 HM2 DIX 13 DIX HM3 3HM H 0 1 N N N N N N 42.965 -11.306 45.297 -1.040 0.017 4.890 HM3 DIX 14 DIX H31 1H3 H 0 1 N N N N N N 39.679 -9.857 45.184 -1.379 -0.176 2.597 H31 DIX 15 DIX H32 2H3 H 0 1 N N N N N N 40.621 -11.080 45.871 -0.374 1.268 2.326 H32 DIX 16 DIX H21 1H2 H 0 1 N N N N N N 40.082 -9.665 47.770 1.151 -0.061 0.894 H21 DIX 17 DIX H22 2H2 H 0 1 N N N N N N 41.748 -9.334 47.472 0.146 -1.506 1.164 H22 DIX 18 DIX H11 1H1 H 0 1 N N N N N N 41.037 -7.166 46.214 -1.792 -0.349 0.139 H11 DIX 19 DIX H12 2H1 H 0 1 N N N N N N 39.423 -7.486 46.603 -0.787 1.094 -0.131 H12 DIX 20 DIX "H1'" "H1'" H 0 1 N N N N N N 39.814 -7.595 48.892 -0.239 -1.678 -1.294 "H1'" DIX 21 DIX "H2'1" "1H2'" H 0 0 N N N N N N 40.993 -5.024 47.696 -1.601 -1.053 -3.019 "H2'1" DIX 22 DIX "H2'2" "2H2'" H 0 0 N N N N N N 39.465 -5.249 48.229 -1.997 0.460 -2.158 "H2'2" DIX 23 DIX "H5'1" "1H5'" H 0 0 N N N N N N 42.026 -8.440 49.441 1.283 0.923 -1.206 "H5'1" DIX 24 DIX "H5'2" "2H5'" H 0 0 N N N N N N 42.801 -7.601 48.248 1.899 -0.749 -1.388 "H5'2" DIX 25 DIX "H4'1" "1H4'" H 0 0 N N N N N N 42.460 -6.587 50.956 1.310 -0.829 -3.725 "H4'1" DIX 26 DIX "H4'2" "2H4'" H 0 0 N N N N N N 43.102 -5.680 49.710 1.860 0.869 -3.544 "H4'2" DIX 27 DIX "H3'1" "1H3'" H 0 0 N N N N N N 41.067 -4.404 50.187 -0.596 0.395 -4.547 "H3'1" DIX 28 DIX "H3'2" "2H3'" H 0 0 N N N N N N 40.187 -5.730 50.647 -0.392 1.691 -3.328 "H3'2" DIX 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DIX N CM SING N N 1 DIX N C3 SING N N 2 DIX N HN SING N N 3 DIX CM HM1 SING N N 4 DIX CM HM2 SING N N 5 DIX CM HM3 SING N N 6 DIX C3 C2 SING N N 7 DIX C3 H31 SING N N 8 DIX C3 H32 SING N N 9 DIX C2 C1 SING N N 10 DIX C2 H21 SING N N 11 DIX C2 H22 SING N N 12 DIX C1 "C1'" SING N N 13 DIX C1 H11 SING N N 14 DIX C1 H12 SING N N 15 DIX "C1'" "C2'" SING N N 16 DIX "C1'" "C5'" SING N N 17 DIX "C1'" "H1'" SING N N 18 DIX "C2'" "C3'" SING N N 19 DIX "C2'" "H2'1" SING N N 20 DIX "C2'" "H2'2" SING N N 21 DIX "C5'" "C4'" SING N N 22 DIX "C5'" "H5'1" SING N N 23 DIX "C5'" "H5'2" SING N N 24 DIX "C4'" "C3'" SING N N 25 DIX "C4'" "H4'1" SING N N 26 DIX "C4'" "H4'2" SING N N 27 DIX "C3'" "H3'1" SING N N 28 DIX "C3'" "H3'2" SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DIX SMILES ACDLabs 10.04 "N(CCCC1CCCC1)C" DIX SMILES_CANONICAL CACTVS 3.341 CNCCCC1CCCC1 DIX SMILES CACTVS 3.341 CNCCCC1CCCC1 DIX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CNCCCC1CCCC1 DIX SMILES "OpenEye OEToolkits" 1.5.0 CNCCCC1CCCC1 DIX InChI InChI 1.03 InChI=1S/C9H19N/c1-10-8-4-7-9-5-2-3-6-9/h9-10H,2-8H2,1H3 DIX InChIKey InChI 1.03 XQXPWKNEZKBRNQ-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DIX "SYSTEMATIC NAME" ACDLabs 10.04 3-cyclopentyl-N-methylpropan-1-amine DIX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 3-cyclopentyl-N-methyl-propan-1-amine # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DIX "Create component" 1999-07-08 EBI DIX "Modify descriptor" 2011-06-04 RCSB DIX "Modify backbone" 2023-11-03 PDBE DIX "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id DIX _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position C-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #