data_DJ3 # _chem_comp.id DJ3 _chem_comp.name "5S-5,6-oxido-7,9-trans-11,14-cis-eicosatetraenoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H30 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-03-23 _chem_comp.pdbx_modified_date 2019-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.450 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DJ3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5NI2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DJ3 OAB O1 O 0 1 N N N 17.297 69.591 19.460 -7.901 1.704 -1.495 OAB DJ3 1 DJ3 CAU C1 C 0 1 N N N 17.831 69.227 20.464 -7.638 2.355 -0.512 CAU DJ3 2 DJ3 OAC O2 O 0 1 N N N 19.028 69.151 20.530 -8.305 3.492 -0.262 OAC DJ3 3 DJ3 CAR C2 C 0 1 N N N 17.007 68.695 21.740 -6.566 1.885 0.438 CAR DJ3 4 DJ3 CAQ C3 C 0 1 N N N 17.045 67.111 21.886 -5.973 0.570 -0.072 CAQ DJ3 5 DJ3 CAS C4 C 0 1 N N N 17.380 66.590 23.357 -4.885 0.094 0.891 CAS DJ3 6 DJ3 CAW C5 C 0 1 N N S 16.062 66.241 24.154 -4.292 -1.221 0.382 CAW DJ3 7 DJ3 OAT O3 O 0 1 N N N 15.995 65.777 25.581 -4.412 -2.374 1.217 OAT DJ3 8 DJ3 CAV C6 C 0 1 N N S 15.602 64.854 24.522 -3.102 -1.809 1.143 CAV DJ3 9 DJ3 CAK C7 C 0 1 N N N 14.154 64.774 23.932 -2.060 -2.555 0.349 CAK DJ3 10 DJ3 CAG C8 C 0 1 N N N 13.105 65.742 24.463 -0.795 -2.133 0.348 CAG DJ3 11 DJ3 CAE C9 C 0 1 N N N 11.715 65.824 23.851 0.217 -2.858 -0.423 CAE DJ3 12 DJ3 CAD C10 C 0 1 N N N 10.687 66.790 24.443 1.497 -2.432 -0.424 CAD DJ3 13 DJ3 CAF C11 C 0 1 N N N 9.325 66.850 23.801 2.510 -3.156 -1.195 CAF DJ3 14 DJ3 CAH C12 C 0 1 N N N 8.221 67.783 24.239 3.755 -2.685 -1.268 CAH DJ3 15 DJ3 CAM C13 C 0 1 N N N 8.308 68.689 25.439 4.160 -1.494 -0.439 CAM DJ3 16 DJ3 CAI C14 C 0 1 N N N 8.456 67.825 26.699 5.371 -1.845 0.387 CAI DJ3 17 DJ3 CAJ C15 C 0 1 N N N 8.146 68.525 27.976 6.433 -1.079 0.350 CAJ DJ3 18 DJ3 CAN C16 C 0 1 N N N 7.672 69.926 27.809 6.392 0.231 -0.392 CAN DJ3 19 DJ3 CAP C17 C 0 1 N N N 7.646 70.654 29.084 6.844 1.359 0.539 CAP DJ3 20 DJ3 CAO C18 C 0 1 N N N 7.370 72.077 28.714 6.801 2.690 -0.215 CAO DJ3 21 DJ3 CAL C19 C 0 1 N N N 8.352 73.031 29.397 7.253 3.817 0.716 CAL DJ3 22 DJ3 CAA C20 C 0 1 N N N 8.274 72.866 30.902 7.211 5.148 -0.037 CAA DJ3 23 DJ3 H1 H1 H 0 1 N N N 19.409 69.415 19.701 -8.987 3.750 -0.897 H1 DJ3 24 DJ3 HAY H2 H 0 1 N N N 17.439 69.141 22.648 -5.781 2.638 0.499 HAY DJ3 25 DJ3 HAX H3 H 0 1 N N N 15.959 69.013 21.638 -6.999 1.730 1.426 HAX DJ3 26 DJ3 HAV H4 H 0 1 N N N 16.060 66.716 21.597 -6.759 -0.183 -0.134 HAV DJ3 27 DJ3 HAW H5 H 0 1 N N N 17.812 66.721 21.200 -5.541 0.726 -1.061 HAW DJ3 28 DJ3 HAZ H6 H 0 1 N N N 18.005 65.688 23.284 -4.099 0.847 0.953 HAZ DJ3 29 DJ3 HA0 H7 H 0 1 N N N 17.930 67.374 23.899 -5.317 -0.062 1.880 HA0 DJ3 30 DJ3 HA2 H8 H 0 1 N N N 15.231 66.908 23.881 -4.328 -1.369 -0.698 HA2 DJ3 31 DJ3 HA1 H9 H 0 1 N N N 16.274 64.017 24.281 -2.734 -1.263 2.011 HA1 DJ3 32 DJ3 HAK H10 H 0 1 N N N 13.906 64.051 23.169 -2.338 -3.430 -0.219 HAK DJ3 33 DJ3 HAG H11 H 0 1 N N N 13.354 66.385 25.294 -0.517 -1.258 0.916 HAG DJ3 34 DJ3 HAE H12 H 0 1 N N N 11.456 65.205 23.005 -0.060 -3.733 -0.991 HAE DJ3 35 DJ3 HAD H13 H 0 1 N N N 10.930 67.409 25.294 1.775 -1.556 0.144 HAD DJ3 36 DJ3 HAF H14 H 0 1 N N N 9.126 66.183 22.975 2.248 -4.072 -1.705 HAF DJ3 37 DJ3 HAH H15 H 0 1 N N N 7.313 67.802 23.655 4.473 -3.158 -1.922 HAH DJ3 38 DJ3 HAN H16 H 0 1 N N N 9.181 69.351 25.340 4.398 -0.658 -1.096 HAN DJ3 39 DJ3 HAO H17 H 0 1 N N N 7.393 69.296 25.512 3.339 -1.215 0.221 HAO DJ3 40 DJ3 HAI H18 H 0 1 N N N 8.761 66.790 26.662 5.363 -2.728 1.009 HAI DJ3 41 DJ3 HAJ H19 H 0 1 N N N 8.256 68.056 28.942 7.339 -1.388 0.852 HAJ DJ3 42 DJ3 HAP H20 H 0 1 N N N 8.347 70.449 27.115 7.058 0.183 -1.253 HAP DJ3 43 DJ3 HAQ H21 H 0 1 N N N 6.656 69.909 27.389 5.374 0.426 -0.730 HAQ DJ3 44 DJ3 HAT H22 H 0 1 N N N 6.851 70.263 29.736 6.178 1.408 1.400 HAT DJ3 45 DJ3 HAU H23 H 0 1 N N N 8.615 70.569 29.597 7.861 1.165 0.877 HAU DJ3 46 DJ3 HAS H24 H 0 1 N N N 7.463 72.188 27.624 7.468 2.641 -1.076 HAS DJ3 47 DJ3 HAR H25 H 0 1 N N N 6.346 72.335 29.023 5.784 2.884 -0.553 HAR DJ3 48 DJ3 HAM H26 H 0 1 N N N 9.374 72.806 29.058 6.588 3.866 1.577 HAM DJ3 49 DJ3 HAL H27 H 0 1 N N N 8.098 74.068 29.131 8.271 3.623 1.054 HAL DJ3 50 DJ3 HAC H28 H 0 1 N N N 8.983 73.555 31.384 6.194 5.342 -0.376 HAC DJ3 51 DJ3 HAB H29 H 0 1 N N N 7.253 73.092 31.243 7.533 5.951 0.626 HAB DJ3 52 DJ3 HAA H30 H 0 1 N N N 8.529 71.830 31.171 7.877 5.099 -0.899 HAA DJ3 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DJ3 OAB CAU DOUB N N 1 DJ3 CAU OAC SING N N 2 DJ3 CAU CAR SING N N 3 DJ3 CAR CAQ SING N N 4 DJ3 CAQ CAS SING N N 5 DJ3 CAS CAW SING N N 6 DJ3 CAF CAH DOUB N Z 7 DJ3 CAF CAD SING N N 8 DJ3 CAE CAD DOUB N E 9 DJ3 CAE CAG SING N N 10 DJ3 CAK CAG DOUB N E 11 DJ3 CAK CAV SING N N 12 DJ3 CAW CAV SING N N 13 DJ3 CAW OAT SING N N 14 DJ3 CAH CAM SING N N 15 DJ3 CAV OAT SING N N 16 DJ3 CAM CAI SING N N 17 DJ3 CAI CAJ DOUB N Z 18 DJ3 CAN CAJ SING N N 19 DJ3 CAN CAP SING N N 20 DJ3 CAO CAP SING N N 21 DJ3 CAO CAL SING N N 22 DJ3 CAL CAA SING N N 23 DJ3 OAC H1 SING N N 24 DJ3 CAR HAY SING N N 25 DJ3 CAR HAX SING N N 26 DJ3 CAQ HAV SING N N 27 DJ3 CAQ HAW SING N N 28 DJ3 CAS HAZ SING N N 29 DJ3 CAS HA0 SING N N 30 DJ3 CAW HA2 SING N N 31 DJ3 CAV HA1 SING N N 32 DJ3 CAK HAK SING N N 33 DJ3 CAG HAG SING N N 34 DJ3 CAE HAE SING N N 35 DJ3 CAD HAD SING N N 36 DJ3 CAF HAF SING N N 37 DJ3 CAH HAH SING N N 38 DJ3 CAM HAN SING N N 39 DJ3 CAM HAO SING N N 40 DJ3 CAI HAI SING N N 41 DJ3 CAJ HAJ SING N N 42 DJ3 CAN HAP SING N N 43 DJ3 CAN HAQ SING N N 44 DJ3 CAP HAT SING N N 45 DJ3 CAP HAU SING N N 46 DJ3 CAO HAS SING N N 47 DJ3 CAO HAR SING N N 48 DJ3 CAL HAM SING N N 49 DJ3 CAL HAL SING N N 50 DJ3 CAA HAC SING N N 51 DJ3 CAA HAB SING N N 52 DJ3 CAA HAA SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DJ3 InChI InChI 1.03 "InChI=1S/C20H30O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-15-18-19(23-18)16-14-17-20(21)22/h6-7,9-13,15,18-19H,2-5,8,14,16-17H2,1H3,(H,21,22)/b7-6-,10-9-,12-11+,15-13+/t18-,19-/m0/s1" DJ3 InChIKey InChI 1.03 UFPQIRYSPUYQHK-WAQVJNLQSA-N DJ3 SMILES_CANONICAL CACTVS 3.385 "CCCCC/C=C\C\C=C/C=C/C=C/[C@@H]1O[C@H]1CCCC(O)=O" DJ3 SMILES CACTVS 3.385 "CCCCCC=CCC=CC=CC=C[CH]1O[CH]1CCCC(O)=O" DJ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCC/C=C\C/C=C\C=C\C=C\[C@H]1[C@@H](O1)CCCC(=O)O" DJ3 SMILES "OpenEye OEToolkits" 2.0.6 "CCCCCC=CCC=CC=CC=CC1C(O1)CCCC(=O)O" # _pdbx_chem_comp_identifier.comp_id DJ3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "4-[(2~{S},3~{S})-3-[(1~{E},3~{E},5~{Z},8~{Z})-tetradeca-1,3,5,8-tetraenyl]oxiran-2-yl]butanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DJ3 "Create component" 2017-03-23 EBI DJ3 "Other modification" 2017-03-31 EBI DJ3 "Initial release" 2017-08-23 RCSB DJ3 "Other modification" 2019-09-04 EBI ##