data_DJ8 # _chem_comp.id DJ8 _chem_comp.name "1-[(4-chloranyl-2-methyl-phenyl)methyl]-3-(7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.1^{2,6}.0^{17,20}]docosa-1(20),2(22),3,5,14(21),15,18-heptaen-5-yl)urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H25 Cl N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-15 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.957 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DJ8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QGP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DJ8 N1 N1 N 0 1 N N N -28.320 4.402 11.237 -1.314 0.109 -0.271 N1 DJ8 1 DJ8 C7 C1 C 0 1 N N N -31.875 5.258 10.950 -4.649 1.471 0.463 C7 DJ8 2 DJ8 C8 C2 C 0 1 N N N -29.603 4.623 11.670 -2.294 0.935 0.148 C8 DJ8 3 DJ8 N2 N2 N 0 1 N N N -20.668 1.234 11.257 6.981 -2.053 -0.111 N2 DJ8 4 DJ8 C9 C3 C 0 1 Y N N -27.245 4.025 12.086 0.023 0.533 -0.234 C9 DJ8 5 DJ8 O1 O1 O 0 1 N N N -26.642 2.442 10.470 0.734 -1.731 -0.127 O1 DJ8 6 DJ8 C1 C4 C 0 1 Y N N -32.351 7.737 11.237 -6.483 -0.127 1.052 C1 DJ8 7 DJ8 C5 C5 C 0 1 Y N N -32.921 6.657 9.151 -6.726 1.221 -0.912 C5 DJ8 8 DJ8 C6 C6 C 0 1 Y N N -32.396 6.581 10.439 -5.990 0.837 0.194 C6 DJ8 9 DJ8 N3 N3 N 0 1 Y N N -21.704 2.490 14.935 6.283 1.987 0.047 N3 DJ8 10 DJ8 C4 C7 C 0 1 Y N N -33.407 7.844 8.644 -7.955 0.641 -1.159 C4 DJ8 11 DJ8 C3 C8 C 0 1 Y N N -33.374 8.966 9.436 -8.447 -0.329 -0.304 C3 DJ8 12 DJ8 C2 C9 C 0 1 Y N N -32.847 8.929 10.711 -7.710 -0.713 0.802 C2 DJ8 13 DJ8 N4 N4 N 0 1 Y N N -22.251 3.048 16.069 5.745 3.279 0.047 N4 DJ8 14 DJ8 O O2 O 0 1 N N N -29.976 4.351 12.805 -2.013 2.005 0.652 O DJ8 15 DJ8 N N5 N 0 1 N N N -30.450 5.067 10.708 -3.585 0.574 0.008 N DJ8 16 DJ8 CL CL1 CL 0 0 N N N -34.089 10.444 8.852 -9.991 -1.059 -0.614 CL DJ8 17 DJ8 C C10 C 0 1 N N N -31.787 7.719 12.635 -5.680 -0.545 2.257 C DJ8 18 DJ8 C14 C11 C 0 1 Y N N -26.324 3.075 11.638 1.048 -0.410 -0.157 C14 DJ8 19 DJ8 C13 C12 C 0 1 Y N N -25.183 2.801 12.368 2.365 0.008 -0.108 C13 DJ8 20 DJ8 C15 C13 C 0 1 N N N -25.757 1.405 9.991 1.683 -2.646 -0.679 C15 DJ8 21 DJ8 C16 C14 C 0 1 N N N -24.512 1.997 9.373 2.400 -3.367 0.465 C16 DJ8 22 DJ8 O2 O3 O 0 1 N N N -23.602 0.957 9.004 3.707 -3.755 0.057 O2 DJ8 23 DJ8 C17 C15 C 0 1 N N N -22.683 0.497 10.013 4.748 -2.864 0.463 C17 DJ8 24 DJ8 C18 C16 C 0 1 N N N -21.503 1.435 10.076 5.858 -2.894 -0.589 C18 DJ8 25 DJ8 C19 C17 C 0 1 Y N N -20.978 1.675 12.502 6.724 -0.680 -0.043 C19 DJ8 26 DJ8 N5 N6 N 0 1 Y N N -22.176 2.237 12.624 5.492 -0.220 -0.105 N5 DJ8 27 DJ8 C24 C18 C 0 1 Y N N -22.555 2.539 13.874 5.245 1.095 -0.054 C24 DJ8 28 DJ8 C21 C19 C 0 1 Y N N -20.454 1.971 14.801 7.572 1.537 0.130 C21 DJ8 29 DJ8 C20 C20 C 0 1 Y N N -20.060 1.533 13.585 7.811 0.208 0.089 C20 DJ8 30 DJ8 C23 C21 C 0 1 Y N N -23.719 3.174 14.333 4.068 1.849 -0.081 C23 DJ8 31 DJ8 C22 C22 C 0 1 Y N N -23.454 3.447 15.683 4.442 3.202 -0.024 C22 DJ8 32 DJ8 C12 C23 C 0 1 Y N N -24.946 3.467 13.564 2.667 1.366 -0.143 C12 DJ8 33 DJ8 C11 C24 C 0 1 Y N N -25.872 4.397 14.021 1.633 2.305 -0.233 C11 DJ8 34 DJ8 C10 C25 C 0 1 Y N N -27.017 4.672 13.296 0.321 1.886 -0.276 C10 DJ8 35 DJ8 H1 H1 H 0 1 N N N -28.129 4.513 10.262 -1.533 -0.778 -0.594 H1 DJ8 36 DJ8 H2 H2 H 0 1 N N N -32.055 5.207 12.034 -4.581 2.418 -0.073 H2 DJ8 37 DJ8 H3 H3 H 0 1 N N N -32.426 4.449 10.448 -4.541 1.651 1.533 H3 DJ8 38 DJ8 H4 H4 H 0 1 N N N -20.557 0.244 11.342 7.837 -2.431 0.143 H4 DJ8 39 DJ8 H5 H5 H 0 1 N N N -32.948 5.769 8.537 -6.340 1.975 -1.582 H5 DJ8 40 DJ8 H6 H6 H 0 1 N N N -33.807 7.891 7.642 -8.531 0.941 -2.023 H6 DJ8 41 DJ8 H7 H7 H 0 1 N N N -32.819 9.830 11.306 -8.093 -1.470 1.470 H7 DJ8 42 DJ8 H8 H8 H 0 1 N N N -30.084 5.271 9.800 -3.809 -0.280 -0.395 H8 DJ8 43 DJ8 H9 H9 H 0 1 N N N -30.710 7.939 12.599 -5.945 0.086 3.106 H9 DJ8 44 DJ8 H10 H10 H 0 1 N N N -32.296 8.479 13.245 -5.898 -1.586 2.496 H10 DJ8 45 DJ8 H11 H11 H 0 1 N N N -31.944 6.726 13.081 -4.617 -0.436 2.041 H11 DJ8 46 DJ8 H12 H12 H 0 1 N N N -24.475 2.069 12.009 3.160 -0.720 -0.042 H12 DJ8 47 DJ8 H13 H13 H 0 1 N N N -26.283 0.804 9.234 1.167 -3.375 -1.304 H13 DJ8 48 DJ8 H14 H14 H 0 1 N N N -25.468 0.761 10.835 2.409 -2.099 -1.281 H14 DJ8 49 DJ8 H15 H15 H 0 1 N N N -24.026 2.663 10.101 2.480 -2.698 1.322 H15 DJ8 50 DJ8 H16 H16 H 0 1 N N N -24.789 2.572 8.477 1.832 -4.253 0.748 H16 DJ8 51 DJ8 H17 H17 H 0 1 N N N -23.189 0.477 10.989 4.352 -1.852 0.547 H17 DJ8 52 DJ8 H18 H18 H 0 1 N N N -22.335 -0.515 9.759 5.148 -3.184 1.425 H18 DJ8 53 DJ8 H19 H19 H 0 1 N N N -20.884 1.278 9.180 5.479 -2.499 -1.532 H19 DJ8 54 DJ8 H20 H20 H 0 1 N N N -21.879 2.469 10.086 6.201 -3.919 -0.730 H20 DJ8 55 DJ8 H21 H21 H 0 1 N N N -19.789 1.910 15.650 8.389 2.237 0.226 H21 DJ8 56 DJ8 H22 H22 H 0 1 N N N -19.085 1.091 13.438 8.821 -0.169 0.156 H22 DJ8 57 DJ8 H23 H23 H 0 1 N N N -24.159 3.933 16.341 3.763 4.042 -0.038 H23 DJ8 58 DJ8 H24 H24 H 0 1 N N N -25.695 4.911 14.954 1.864 3.359 -0.270 H24 DJ8 59 DJ8 H25 H25 H 0 1 N N N -27.734 5.389 13.669 -0.475 2.613 -0.341 H25 DJ8 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DJ8 C4 C5 DOUB Y N 1 DJ8 C4 C3 SING Y N 2 DJ8 CL C3 SING N N 3 DJ8 O2 C16 SING N N 4 DJ8 O2 C17 SING N N 5 DJ8 C5 C6 SING Y N 6 DJ8 C16 C15 SING N N 7 DJ8 C3 C2 DOUB Y N 8 DJ8 C15 O1 SING N N 9 DJ8 C17 C18 SING N N 10 DJ8 C18 N2 SING N N 11 DJ8 C6 C7 SING N N 12 DJ8 C6 C1 DOUB Y N 13 DJ8 O1 C14 SING N N 14 DJ8 N C7 SING N N 15 DJ8 N C8 SING N N 16 DJ8 C2 C1 SING Y N 17 DJ8 C1 C SING N N 18 DJ8 N1 C8 SING N N 19 DJ8 N1 C9 SING N N 20 DJ8 N2 C19 SING N N 21 DJ8 C14 C9 DOUB Y N 22 DJ8 C14 C13 SING Y N 23 DJ8 C8 O DOUB N N 24 DJ8 C9 C10 SING Y N 25 DJ8 C13 C12 DOUB Y N 26 DJ8 C19 N5 DOUB Y N 27 DJ8 C19 C20 SING Y N 28 DJ8 N5 C24 SING Y N 29 DJ8 C10 C11 DOUB Y N 30 DJ8 C12 C11 SING Y N 31 DJ8 C12 C23 SING N N 32 DJ8 C20 C21 DOUB Y N 33 DJ8 C24 C23 DOUB Y N 34 DJ8 C24 N3 SING Y N 35 DJ8 C23 C22 SING Y N 36 DJ8 C21 N3 SING Y N 37 DJ8 N3 N4 SING Y N 38 DJ8 C22 N4 DOUB Y N 39 DJ8 N1 H1 SING N N 40 DJ8 C7 H2 SING N N 41 DJ8 C7 H3 SING N N 42 DJ8 N2 H4 SING N N 43 DJ8 C5 H5 SING N N 44 DJ8 C4 H6 SING N N 45 DJ8 C2 H7 SING N N 46 DJ8 N H8 SING N N 47 DJ8 C H9 SING N N 48 DJ8 C H10 SING N N 49 DJ8 C H11 SING N N 50 DJ8 C13 H12 SING N N 51 DJ8 C15 H13 SING N N 52 DJ8 C15 H14 SING N N 53 DJ8 C16 H15 SING N N 54 DJ8 C16 H16 SING N N 55 DJ8 C17 H17 SING N N 56 DJ8 C17 H18 SING N N 57 DJ8 C18 H19 SING N N 58 DJ8 C18 H20 SING N N 59 DJ8 C21 H21 SING N N 60 DJ8 C20 H22 SING N N 61 DJ8 C22 H23 SING N N 62 DJ8 C11 H24 SING N N 63 DJ8 C10 H25 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DJ8 InChI InChI 1.06 "InChI=1S/C25H25ClN6O3/c1-16-12-19(26)4-2-18(16)14-28-25(33)30-21-5-3-17-13-22(21)35-11-10-34-9-7-27-23-6-8-32-24(31-23)20(17)15-29-32/h2-6,8,12-13,15H,7,9-11,14H2,1H3,(H,27,31)(H2,28,30,33)" DJ8 InChIKey InChI 1.06 SMEVONJPJBGLLE-UHFFFAOYSA-N DJ8 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(Cl)ccc1CNC(=O)Nc2ccc3cc2OCCOCCNc4ccn5ncc3c5n4" DJ8 SMILES CACTVS 3.385 "Cc1cc(Cl)ccc1CNC(=O)Nc2ccc3cc2OCCOCCNc4ccn5ncc3c5n4" DJ8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1CNC(=O)Nc2ccc-3cc2OCCOCCNc4ccn5c(c3cn5)n4)Cl" DJ8 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1CNC(=O)Nc2ccc-3cc2OCCOCCNc4ccn5c(c3cn5)n4)Cl" # _pdbx_chem_comp_identifier.comp_id DJ8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "1-[(4-chloranyl-2-methyl-phenyl)methyl]-3-(7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.1^{2,6}.0^{17,20}]docosa-1(20),2(22),3,5,14(21),15,18-heptaen-5-yl)urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DJ8 "Create component" 2021-12-15 PDBE DJ8 "Initial release" 2022-01-26 RCSB DJ8 "Modify descriptor" 2022-08-22 RCSB #