data_DL9 # _chem_comp.id DL9 _chem_comp.name "(E)-4-(1-(4-(1-cyclopropylpiperidin-4-yl)phenyl)-5-hydroxy-2-phenylpent-1-en-1-yl)phenol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H35 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-08-13 _chem_comp.pdbx_modified_date 2020-08-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 453.615 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DL9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KNR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DL9 N1 N1 N 0 1 N N N -43.937 -14.201 -1.799 -6.468 0.864 0.328 N1 DL9 1 DL9 C4 C1 C 0 1 N N N -42.433 -11.102 -10.619 2.320 -1.086 -0.415 C4 DL9 2 DL9 C5 C2 C 0 1 Y N N -43.796 -10.542 -10.349 1.434 -2.246 -0.231 C5 DL9 3 DL9 C6 C3 C 0 1 Y N N -43.975 -9.539 -9.405 1.070 -3.034 -1.328 C6 DL9 4 DL9 C7 C4 C 0 1 Y N N -45.229 -9.021 -9.149 0.240 -4.120 -1.146 C7 DL9 5 DL9 C8 C5 C 0 1 Y N N -46.320 -9.503 -9.823 -0.233 -4.431 0.117 C8 DL9 6 DL9 C10 C6 C 0 1 Y N N -44.917 -11.010 -11.018 0.956 -2.570 1.043 C10 DL9 7 DL9 C13 C7 C 0 1 Y N N -39.246 -11.145 -9.965 3.294 1.723 -1.488 C13 DL9 8 DL9 C15 C8 C 0 1 Y N N -37.598 -12.877 -10.012 4.506 3.481 -0.397 C15 DL9 9 DL9 C17 C9 C 0 1 Y N N -39.904 -13.437 -9.754 3.125 2.015 0.904 C17 DL9 10 DL9 C20 C10 C 0 1 Y N N -43.760 -13.200 -6.941 -1.264 1.055 1.716 C20 DL9 11 DL9 C21 C11 C 0 1 Y N N -43.138 -12.749 -5.798 -2.240 0.767 0.779 C21 DL9 12 DL9 C22 C12 C 0 1 Y N N -41.934 -12.067 -5.921 -1.889 0.279 -0.468 C22 DL9 13 DL9 C24 C13 C 0 1 N N N -43.687 -13.270 -4.502 -3.692 0.986 1.116 C24 DL9 14 DL9 C26 C14 C 0 1 N N N -43.260 -12.922 -2.016 -5.790 2.162 0.443 C26 DL9 15 DL9 C28 C15 C 0 1 N N N -45.028 -13.221 -3.827 -4.448 -0.342 1.011 C28 DL9 16 DL9 C1 C16 C 0 1 N N N -41.093 -9.000 -13.541 6.048 -1.898 -0.119 C1 DL9 17 DL9 C11 C17 C 0 1 N N N -41.679 -11.694 -9.673 1.855 0.165 -0.180 C11 DL9 18 DL9 C12 C18 C 0 1 Y N N -40.259 -12.089 -9.818 2.775 1.322 -0.256 C12 DL9 19 DL9 C14 C19 C 0 1 Y N N -37.927 -11.530 -10.062 4.155 2.798 -1.554 C14 DL9 20 DL9 C16 C20 C 0 1 Y N N -38.590 -13.836 -9.862 3.991 3.085 0.830 C16 DL9 21 DL9 C18 C21 C 0 1 Y N N -42.161 -12.072 -8.323 0.429 0.375 0.154 C18 DL9 22 DL9 C19 C22 C 0 1 Y N N -43.307 -12.841 -8.189 0.068 0.862 1.411 C19 DL9 23 DL9 C2 C23 C 0 1 N N N -41.770 -9.349 -12.254 4.629 -1.570 0.349 C2 DL9 24 DL9 C23 C24 C 0 1 Y N N -41.461 -11.703 -7.172 -0.561 0.076 -0.783 C23 DL9 25 DL9 C25 C25 C 0 1 N N N -42.632 -13.019 -3.394 -4.301 1.990 0.133 C25 DL9 26 DL9 C27 C26 C 0 1 N N N -45.018 -14.344 -2.792 -5.932 -0.102 1.296 C27 DL9 27 DL9 C29 C27 C 0 1 N N N -44.386 -14.379 -0.438 -6.378 0.343 -1.042 C29 DL9 28 DL9 C3 C28 C 0 1 N N N -41.918 -10.849 -12.019 3.743 -1.290 -0.867 C3 DL9 29 DL9 C30 C29 C 0 1 N N N -44.546 -15.793 0.016 -7.037 -1.007 -1.329 C30 DL9 30 DL9 C31 C30 C 0 1 N N N -43.431 -14.957 0.549 -7.669 0.281 -1.861 C31 DL9 31 DL9 C9 C31 C 0 1 Y N N -46.168 -10.495 -10.751 0.122 -3.655 1.207 C9 DL9 32 DL9 O1 O1 O 0 1 N N N -41.977 -9.139 -14.630 6.875 -2.159 1.017 O1 DL9 33 DL9 O2 O2 O 0 1 N N N -36.299 -13.270 -10.112 5.359 4.536 -0.466 O2 DL9 34 DL9 H8 H2 H 0 1 N N N -43.121 -9.159 -8.864 1.438 -2.793 -2.314 H8 DL9 35 DL9 H9 H3 H 0 1 N N N -45.350 -8.236 -8.417 -0.042 -4.730 -1.992 H9 DL9 36 DL9 H10 H4 H 0 1 N N N -47.301 -9.099 -9.621 -0.884 -5.282 0.252 H10 DL9 37 DL9 H12 H5 H 0 1 N N N -44.809 -11.789 -11.758 1.233 -1.966 1.895 H12 DL9 38 DL9 H13 H6 H 0 1 N N N -39.498 -10.096 -10.004 3.025 1.189 -2.388 H13 DL9 39 DL9 H17 H7 H 0 1 N N N -40.674 -14.182 -9.617 2.726 1.707 1.859 H17 DL9 40 DL9 H19 H8 H 0 1 N N N -44.620 -13.848 -6.856 -1.545 1.436 2.687 H19 DL9 41 DL9 H20 H9 H 0 1 N N N -41.364 -11.819 -5.038 -2.655 0.056 -1.195 H20 DL9 42 DL9 H22 H10 H 0 1 N N N -43.569 -14.354 -4.649 -3.776 1.373 2.132 H22 DL9 43 DL9 H25 H11 H 0 1 N N N -42.485 -12.764 -1.252 -6.229 2.865 -0.264 H25 DL9 44 DL9 H26 H12 H 0 1 N N N -43.984 -12.094 -1.982 -5.907 2.545 1.457 H26 DL9 45 DL9 H29 H13 H 0 1 N N N -45.173 -12.248 -3.334 -4.331 -0.748 0.006 H29 DL9 46 DL9 H30 H14 H 0 1 N N N -45.831 -13.384 -4.560 -4.047 -1.047 1.739 H30 DL9 47 DL9 H2 H15 H 0 1 N N N -40.233 -9.670 -13.688 6.025 -2.777 -0.762 H2 DL9 48 DL9 H3 H16 H 0 1 N N N -40.743 -7.958 -13.492 6.452 -1.051 -0.674 H3 DL9 49 DL9 H14 H17 H 0 1 N N N -37.152 -10.786 -10.176 4.557 3.109 -2.507 H14 DL9 50 DL9 H16 H18 H 0 1 N N N -38.334 -14.885 -9.830 4.267 3.618 1.728 H16 DL9 51 DL9 H18 H19 H 0 1 N N N -43.846 -13.160 -9.069 0.829 1.095 2.140 H18 DL9 52 DL9 H5 H20 H 0 1 N N N -41.181 -8.926 -11.427 4.225 -2.416 0.905 H5 DL9 53 DL9 H4 H21 H 0 1 N N N -42.774 -8.899 -12.258 4.652 -0.690 0.992 H4 DL9 54 DL9 H21 H22 H 0 1 N N N -40.548 -11.132 -7.257 -0.288 -0.302 -1.757 H21 DL9 55 DL9 H24 H23 H 0 1 N N N -41.911 -13.850 -3.397 -3.795 2.950 0.234 H24 DL9 56 DL9 H23 H24 H 0 1 N N N -42.107 -12.077 -3.611 -4.181 1.620 -0.885 H23 DL9 57 DL9 H28 H25 H 0 1 N N N -45.983 -14.342 -2.263 -6.050 0.291 2.305 H28 DL9 58 DL9 H27 H26 H 0 1 N N N -44.889 -15.303 -3.316 -6.475 -1.043 1.207 H27 DL9 59 DL9 H31 H27 H 0 1 N N N -45.116 -13.655 -0.047 -5.455 0.575 -1.574 H31 DL9 60 DL9 H7 H28 H 0 1 N N N -42.628 -11.264 -12.749 3.790 -2.135 -1.553 H7 DL9 61 DL9 H6 H29 H 0 1 N N N -40.939 -11.336 -12.141 4.095 -0.391 -1.373 H6 DL9 62 DL9 H33 H30 H 0 1 N N N -45.387 -16.070 0.669 -6.549 -1.663 -2.050 H33 DL9 63 DL9 H32 H31 H 0 1 N N N -44.331 -16.621 -0.676 -7.538 -1.509 -0.501 H32 DL9 64 DL9 H34 H32 H 0 1 N N N -42.394 -15.169 0.251 -8.585 0.627 -1.383 H34 DL9 65 DL9 H35 H33 H 0 1 N N N -43.450 -14.618 1.595 -7.595 0.473 -2.931 H35 DL9 66 DL9 H11 H34 H 0 1 N N N -47.031 -10.877 -11.277 -0.248 -3.907 2.190 H11 DL9 67 DL9 H1 H35 H 0 1 N N N -41.526 -8.913 -15.435 7.791 -2.375 0.795 H1 DL9 68 DL9 H15 H36 H 0 1 N N N -36.249 -14.217 -10.060 6.291 4.295 -0.375 H15 DL9 69 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DL9 O1 C1 SING N N 1 DL9 C1 C2 SING N N 2 DL9 C2 C3 SING N N 3 DL9 C3 C4 SING N N 4 DL9 C10 C9 DOUB Y N 5 DL9 C10 C5 SING Y N 6 DL9 C9 C8 SING Y N 7 DL9 C4 C5 SING N N 8 DL9 C4 C11 DOUB N E 9 DL9 C5 C6 DOUB Y N 10 DL9 O2 C15 SING N N 11 DL9 C14 C15 DOUB Y N 12 DL9 C14 C13 SING Y N 13 DL9 C15 C16 SING Y N 14 DL9 C13 C12 DOUB Y N 15 DL9 C16 C17 DOUB Y N 16 DL9 C8 C7 DOUB Y N 17 DL9 C12 C17 SING Y N 18 DL9 C12 C11 SING N N 19 DL9 C11 C18 SING N N 20 DL9 C6 C7 SING Y N 21 DL9 C18 C19 DOUB Y N 22 DL9 C18 C23 SING Y N 23 DL9 C19 C20 SING Y N 24 DL9 C23 C22 DOUB Y N 25 DL9 C20 C21 DOUB Y N 26 DL9 C22 C21 SING Y N 27 DL9 C21 C24 SING N N 28 DL9 C24 C28 SING N N 29 DL9 C24 C25 SING N N 30 DL9 C28 C27 SING N N 31 DL9 C25 C26 SING N N 32 DL9 C27 N1 SING N N 33 DL9 C26 N1 SING N N 34 DL9 N1 C29 SING N N 35 DL9 C29 C30 SING N N 36 DL9 C29 C31 SING N N 37 DL9 C30 C31 SING N N 38 DL9 C6 H8 SING N N 39 DL9 C7 H9 SING N N 40 DL9 C8 H10 SING N N 41 DL9 C10 H12 SING N N 42 DL9 C13 H13 SING N N 43 DL9 C17 H17 SING N N 44 DL9 C20 H19 SING N N 45 DL9 C22 H20 SING N N 46 DL9 C24 H22 SING N N 47 DL9 C26 H25 SING N N 48 DL9 C26 H26 SING N N 49 DL9 C28 H29 SING N N 50 DL9 C28 H30 SING N N 51 DL9 C1 H2 SING N N 52 DL9 C1 H3 SING N N 53 DL9 C14 H14 SING N N 54 DL9 C16 H16 SING N N 55 DL9 C19 H18 SING N N 56 DL9 C2 H5 SING N N 57 DL9 C2 H4 SING N N 58 DL9 C23 H21 SING N N 59 DL9 C25 H24 SING N N 60 DL9 C25 H23 SING N N 61 DL9 C27 H28 SING N N 62 DL9 C27 H27 SING N N 63 DL9 C29 H31 SING N N 64 DL9 C3 H7 SING N N 65 DL9 C3 H6 SING N N 66 DL9 C30 H33 SING N N 67 DL9 C30 H32 SING N N 68 DL9 C31 H34 SING N N 69 DL9 C31 H35 SING N N 70 DL9 C9 H11 SING N N 71 DL9 O1 H1 SING N N 72 DL9 O2 H15 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DL9 InChI InChI 1.03 "InChI=1S/C31H35NO2/c33-22-4-7-30(25-5-2-1-3-6-25)31(27-12-16-29(34)17-13-27)26-10-8-23(9-11-26)24-18-20-32(21-19-24)28-14-15-28/h1-3,5-6,8-13,16-17,24,28,33-34H,4,7,14-15,18-22H2/b31-30+" DL9 InChIKey InChI 1.03 QLPDYHPRQYYVTE-NVQSTNCTSA-N DL9 SMILES_CANONICAL CACTVS 3.385 "OCCCC(/c1ccccc1)=C(\c2ccc(O)cc2)c3ccc(cc3)C4CCN(CC4)C5CC5" DL9 SMILES CACTVS 3.385 "OCCCC(c1ccccc1)=C(c2ccc(O)cc2)c3ccc(cc3)C4CCN(CC4)C5CC5" DL9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)/C(=C(\c2ccc(cc2)C3CCN(CC3)C4CC4)/c5ccc(cc5)O)/CCCO" DL9 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=C(c2ccc(cc2)C3CCN(CC3)C4CC4)c5ccc(cc5)O)CCCO" # _pdbx_chem_comp_identifier.comp_id DL9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[(~{E})-1-[4-(1-cyclopropylpiperidin-4-yl)phenyl]-5-oxidanyl-2-phenyl-pent-1-enyl]phenol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DL9 "Create component" 2019-08-13 PDBJ DL9 "Initial release" 2020-08-12 RCSB ##