data_DNK
#
_chem_comp.id DNK
_chem_comp.name "(2~{S})-3-methyl-2-phenyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H25 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-01-24
_chem_comp.pdbx_modified_date 2018-03-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 351.439
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code DNK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6FK9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DNK C10 C1 C 0 1 N N N -234.265 48.641 35.254 1.362 0.585 0.864 C10 DNK 1
DNK C11 C2 C 0 1 N N N -233.601 47.683 36.257 0.086 -0.111 0.376 C11 DNK 2
DNK C13 C3 C 0 1 N N N -232.815 45.317 36.115 -1.807 1.098 -0.595 C13 DNK 3
DNK C15 C4 C 0 1 N N N -231.700 43.007 36.052 -3.809 1.604 0.779 C15 DNK 4
DNK C16 C5 C 0 1 N N N -231.981 41.499 36.073 -4.748 1.054 1.854 C16 DNK 5
DNK C17 C6 C 0 1 N N N -230.668 43.318 34.954 -3.237 2.946 1.238 C17 DNK 6
DNK C18 C7 C 0 1 Y N N -234.148 43.289 36.707 -3.234 -0.740 0.208 C18 DNK 7
DNK C19 C8 C 0 1 Y N N -235.256 42.641 36.143 -4.035 -0.894 -0.908 C19 DNK 8
DNK C20 C9 C 0 1 Y N N -236.297 42.193 36.951 -4.551 -2.138 -1.221 C20 DNK 9
DNK C21 C10 C 0 1 Y N N -236.253 42.388 38.324 -4.266 -3.227 -0.418 C21 DNK 10
DNK C22 C11 C 0 1 Y N N -235.159 43.037 38.883 -3.464 -3.072 0.697 C22 DNK 11
DNK C23 C12 C 0 1 Y N N -234.114 43.493 38.083 -2.949 -1.829 1.011 C23 DNK 12
DNK C25 C13 C 0 1 N N N -235.242 45.925 35.511 0.299 1.087 -1.842 C25 DNK 13
DNK C26 C14 C 0 1 N N N -235.741 46.832 34.402 1.574 1.773 -1.338 C26 DNK 14
DNK C1 C15 C 0 1 Y N N -238.450 50.437 34.522 4.543 -1.901 -0.298 C1 DNK 15
DNK C2 C16 C 0 1 Y N N -237.481 49.541 34.902 3.850 -0.702 -0.346 C2 DNK 16
DNK C3 C17 C 0 1 Y N N -237.477 48.907 36.166 4.359 0.419 0.306 C3 DNK 17
DNK C4 C18 C 0 1 Y N N -238.437 49.138 37.101 5.554 0.330 0.999 C4 DNK 18
DNK C5 C19 C 0 1 Y N N -239.425 50.043 36.713 6.240 -0.870 1.043 C5 DNK 19
DNK C6 C20 C 0 1 Y N N -239.436 50.680 35.482 5.736 -1.982 0.396 C6 DNK 20
DNK O7 O1 O 0 1 N N N -236.403 48.086 36.264 3.500 1.464 0.112 O7 DNK 21
DNK C8 C21 C 0 1 N N N -235.714 48.195 35.025 2.271 0.868 -0.328 C8 DNK 22
DNK O9 O2 O 0 1 N N N -236.403 49.116 34.185 2.674 -0.360 -0.950 O9 DNK 23
DNK N12 N1 N 0 1 N N N -233.860 46.250 35.951 -0.521 0.705 -0.684 N12 DNK 24
DNK C14 C22 C 0 1 N N S -233.022 43.802 35.821 -2.665 0.615 0.546 C14 DNK 25
DNK O24 O3 O 0 1 N N N -231.727 45.759 36.498 -2.274 1.840 -1.433 O24 DNK 26
DNK H1 H1 H 0 1 N N N -233.716 48.616 34.301 1.099 1.524 1.352 H1 DNK 27
DNK H2 H2 H 0 1 N N N -234.253 49.664 35.658 1.881 -0.060 1.572 H2 DNK 28
DNK H3 H3 H 0 1 N N N -232.515 47.854 36.239 0.336 -1.096 -0.019 H3 DNK 29
DNK H4 H4 H 0 1 N N N -233.990 47.903 37.262 -0.613 -0.217 1.206 H4 DNK 30
DNK H5 H5 H 0 1 N N N -231.281 43.303 37.025 -4.363 1.744 -0.150 H5 DNK 31
DNK H6 H6 H 0 1 N N N -232.719 41.274 36.857 -5.563 1.759 2.020 H6 DNK 32
DNK H7 H7 H 0 1 N N N -232.378 41.186 35.096 -5.156 0.098 1.527 H7 DNK 33
DNK H8 H8 H 0 1 N N N -231.048 40.955 36.281 -4.194 0.914 2.783 H8 DNK 34
DNK H9 H9 H 0 1 N N N -229.748 42.745 35.142 -2.609 2.792 2.116 H9 DNK 35
DNK H10 H10 H 0 1 N N N -231.080 43.038 33.973 -2.640 3.380 0.437 H10 DNK 36
DNK H11 H11 H 0 1 N N N -230.438 44.394 34.961 -4.054 3.622 1.490 H11 DNK 37
DNK H12 H12 H 0 1 N N N -235.302 42.488 35.075 -4.258 -0.044 -1.535 H12 DNK 38
DNK H13 H13 H 0 1 N N N -237.144 41.691 36.507 -5.178 -2.259 -2.092 H13 DNK 39
DNK H14 H14 H 0 1 N N N -237.060 42.039 38.951 -4.670 -4.198 -0.662 H14 DNK 40
DNK H15 H15 H 0 1 N N N -235.118 43.190 39.951 -3.242 -3.923 1.324 H15 DNK 41
DNK H16 H16 H 0 1 N N N -233.276 44.006 38.531 -2.323 -1.708 1.883 H16 DNK 42
DNK H17 H17 H 0 1 N N N -235.917 46.023 36.374 -0.261 1.775 -2.475 H17 DNK 43
DNK H18 H18 H 0 1 N N N -235.259 44.887 35.149 0.562 0.196 -2.413 H18 DNK 44
DNK H19 H19 H 0 1 N N N -236.763 46.558 34.100 2.241 1.961 -2.179 H19 DNK 45
DNK H20 H20 H 0 1 N N N -235.075 46.786 33.527 1.314 2.718 -0.861 H20 DNK 46
DNK H21 H21 H 0 1 N N N -238.450 50.917 33.555 4.151 -2.771 -0.803 H21 DNK 47
DNK H22 H22 H 0 1 N N N -238.435 48.658 38.069 5.951 1.197 1.505 H22 DNK 48
DNK H23 H23 H 0 1 N N N -240.223 50.259 37.408 7.173 -0.938 1.584 H23 DNK 49
DNK H24 H24 H 0 1 N N N -240.226 51.382 35.259 6.275 -2.918 0.434 H24 DNK 50
DNK H25 H25 H 0 1 N N N -233.317 43.688 34.767 -2.060 0.540 1.449 H25 DNK 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DNK O9 C2 SING N N 1
DNK O9 C8 SING N N 2
DNK C26 C8 SING N N 3
DNK C26 C25 SING N N 4
DNK C1 C2 DOUB Y N 5
DNK C1 C6 SING Y N 6
DNK C2 C3 SING Y N 7
DNK C17 C15 SING N N 8
DNK C8 C10 SING N N 9
DNK C8 O7 SING N N 10
DNK C10 C11 SING N N 11
DNK C6 C5 DOUB Y N 12
DNK C25 N12 SING N N 13
DNK C14 C15 SING N N 14
DNK C14 C13 SING N N 15
DNK C14 C18 SING N N 16
DNK N12 C13 SING N N 17
DNK N12 C11 SING N N 18
DNK C15 C16 SING N N 19
DNK C13 O24 DOUB N N 20
DNK C19 C18 DOUB Y N 21
DNK C19 C20 SING Y N 22
DNK C3 O7 SING N N 23
DNK C3 C4 DOUB Y N 24
DNK C18 C23 SING Y N 25
DNK C5 C4 SING Y N 26
DNK C20 C21 DOUB Y N 27
DNK C23 C22 DOUB Y N 28
DNK C21 C22 SING Y N 29
DNK C10 H1 SING N N 30
DNK C10 H2 SING N N 31
DNK C11 H3 SING N N 32
DNK C11 H4 SING N N 33
DNK C15 H5 SING N N 34
DNK C16 H6 SING N N 35
DNK C16 H7 SING N N 36
DNK C16 H8 SING N N 37
DNK C17 H9 SING N N 38
DNK C17 H10 SING N N 39
DNK C17 H11 SING N N 40
DNK C19 H12 SING N N 41
DNK C20 H13 SING N N 42
DNK C21 H14 SING N N 43
DNK C22 H15 SING N N 44
DNK C23 H16 SING N N 45
DNK C25 H17 SING N N 46
DNK C25 H18 SING N N 47
DNK C26 H19 SING N N 48
DNK C26 H20 SING N N 49
DNK C1 H21 SING N N 50
DNK C4 H22 SING N N 51
DNK C5 H23 SING N N 52
DNK C6 H24 SING N N 53
DNK C14 H25 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DNK InChI InChI 1.03 "InChI=1S/C22H25NO3/c1-16(2)20(17-8-4-3-5-9-17)21(24)23-14-12-22(13-15-23)25-18-10-6-7-11-19(18)26-22/h3-11,16,20H,12-15H2,1-2H3/t20-/m0/s1"
DNK InChIKey InChI 1.03 RWIUNGUJHWADDD-FQEVSTJZSA-N
DNK SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](C(=O)N1CCC2(CC1)Oc3ccccc3O2)c4ccccc4"
DNK SMILES CACTVS 3.385 "CC(C)[CH](C(=O)N1CCC2(CC1)Oc3ccccc3O2)c4ccccc4"
DNK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)[C@@H](c1ccccc1)C(=O)N2CCC3(CC2)Oc4ccccc4O3"
DNK SMILES "OpenEye OEToolkits" 2.0.6 "CC(C)C(c1ccccc1)C(=O)N2CCC3(CC2)Oc4ccccc4O3"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DNK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-3-methyl-2-phenyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DNK "Create component" 2018-01-24 EBI
DNK "Initial release" 2018-04-04 RCSB
#