data_DNO # _chem_comp.id DNO _chem_comp.name D-mannose _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-11-19 _chem_comp.pdbx_modified_date 2020-06-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DNO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3BDK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DNO C1 C1 C 0 1 N N N 23.652 -1.172 -1.079 3.154 0.443 -0.363 C1 DNO 1 DNO C2 C2 C 0 1 N N S 22.476 -1.785 -0.301 1.958 -0.450 -0.153 C2 DNO 2 DNO C3 C3 C 0 1 N N S 21.360 -0.773 0.109 0.686 0.399 -0.121 C3 DNO 3 DNO C4 C4 C 0 1 N N R 21.685 0.509 0.943 -0.528 -0.507 0.092 C4 DNO 4 DNO C5 C5 C 0 1 N N R 22.740 0.434 2.088 -1.808 0.325 0.000 C5 DNO 5 DNO C6 C6 C 0 1 N N N 22.409 1.477 3.163 -3.022 -0.582 0.213 C6 DNO 6 DNO O1 O1 O 0 1 N Y N 24.483 -1.897 -1.629 4.033 0.478 0.464 O1 DNO 7 DNO O2 O2 O 0 1 N N N 22.959 -2.535 0.828 2.096 -1.148 1.087 O2 DNO 8 DNO O3 O3 O 0 1 N N N 20.355 -1.485 0.825 0.548 1.097 -1.360 O3 DNO 9 DNO O4 O4 O 0 1 N N N 21.976 1.594 0.052 -0.546 -1.523 -0.913 O4 DNO 10 DNO O5 O5 O 0 1 N N N 22.812 -0.852 2.724 -1.790 1.340 1.005 O5 DNO 11 DNO O6 O6 O 0 1 N N N 23.192 2.653 2.940 -4.220 0.171 0.012 O6 DNO 12 DNO H1 H1 H 0 1 N N N 23.750 -0.098 -1.144 3.226 1.048 -1.254 H1 DNO 13 DNO H2 H2 H 0 1 N N N 21.975 -2.467 -1.004 1.894 -1.170 -0.969 H2 DNO 14 DNO H3 H3 H 0 1 N N N 21.085 -0.357 -0.871 0.750 1.119 0.696 H3 DNO 15 DNO H4 H4 H 0 1 N N N 20.761 0.662 1.521 -0.466 -0.971 1.077 H4 DNO 16 DNO H5 H5 H 0 1 N N N 23.714 0.627 1.615 -1.870 0.789 -0.984 H5 DNO 17 DNO H61 H6 H 0 1 N N N 21.340 1.732 3.111 -2.988 -1.408 -0.498 H6 DNO 18 DNO H62 H6A H 0 1 N N N 22.638 1.066 4.157 -3.007 -0.976 1.229 H6A DNO 19 DNO HO2 HO2 H 0 1 N Y N 23.065 -3.446 0.581 2.159 -0.569 1.859 HO2 DNO 20 DNO HO3 HO3 H 0 1 N Y N 20.651 -1.643 1.714 0.485 0.518 -2.132 HO3 DNO 21 DNO HO4 HO4 H 0 1 N Y N 22.040 2.402 0.547 -0.600 -1.181 -1.816 HO4 DNO 22 DNO HO5 HO5 H 0 1 N Y N 22.828 -1.533 2.062 -1.736 0.999 1.908 HO5 DNO 23 DNO HO6 HO6 H 0 1 N Y N 23.366 3.081 3.770 -5.031 -0.342 0.131 HO6 DNO 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DNO C1 C2 SING N N 1 DNO C1 O1 DOUB N N 2 DNO C2 C3 SING N N 3 DNO C2 O2 SING N N 4 DNO C3 C4 SING N N 5 DNO C3 O3 SING N N 6 DNO C4 C5 SING N N 7 DNO C4 O4 SING N N 8 DNO C5 C6 SING N N 9 DNO C5 O5 SING N N 10 DNO C6 O6 SING N N 11 DNO C1 H1 SING N N 12 DNO C2 H2 SING N N 13 DNO C3 H3 SING N N 14 DNO C4 H4 SING N N 15 DNO C5 H5 SING N N 16 DNO C6 H61 SING N N 17 DNO C6 H62 SING N N 18 DNO O2 HO2 SING N N 19 DNO O3 HO3 SING N N 20 DNO O4 HO4 SING N N 21 DNO O5 HO5 SING N N 22 DNO O6 HO6 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DNO SMILES ACDLabs 10.04 "O=CC(O)C(O)C(O)C(O)CO" DNO SMILES_CANONICAL CACTVS 3.341 "OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)C=O" DNO SMILES CACTVS 3.341 "OC[CH](O)[CH](O)[CH](O)[CH](O)C=O" DNO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]([C@H]([C@@H]([C@@H](C=O)O)O)O)O)O" DNO SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C(C(C(C=O)O)O)O)O)O" DNO InChI InChI 1.03 "InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h1,3-6,8-12H,2H2/t3-,4-,5-,6-/m1/s1" DNO InChIKey InChI 1.03 GZCGUPFRVQAUEE-KVTDHHQDSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DNO "SYSTEMATIC NAME" ACDLabs 10.04 D-mannose DNO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanal" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DNO "Create component" 2007-11-19 PDBJ DNO "Modify descriptor" 2011-06-04 RCSB DNO "Modify atom id" 2020-06-24 RCSB ##