data_DNU # _chem_comp.id DNU _chem_comp.name "1-[4-[7-(8-ethynyl-7-fluoranyl-naphthalen-1-yl)-8-fluoranyl-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]pyrido[4,3-d]pyrimidin-4-yl]piperazin-1-yl]-3-oxidanyl-propan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H33 F3 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-02 _chem_comp.pdbx_modified_date 2024-01-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 630.659 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DNU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JHL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DNU C4 C1 C 0 1 Y N N N N N -9.155 39.874 3.072 1.253 -0.896 -0.603 C4 DNU 1 DNU C5 C2 C 0 1 Y N N N N N -9.298 39.371 4.412 -0.148 -1.046 -0.741 C5 DNU 2 DNU C6 C3 C 0 1 Y N N N N N -8.448 39.853 5.426 -0.951 0.125 -0.742 C6 DNU 3 DNU N1 N1 N 0 1 Y N N N N N -7.509 40.796 5.069 -0.358 1.317 -0.612 N1 DNU 4 DNU N3 N2 N 0 1 Y N N N N N -8.212 40.788 2.822 1.743 0.331 -0.480 N3 DNU 5 DNU CBM C4 C 0 1 N N N N N N -4.473 44.117 2.619 2.221 5.033 1.121 CBM DNU 6 DNU CBN C5 C 0 1 N N R N N N -4.352 45.077 3.781 1.311 5.879 2.050 CBN DNU 7 DNU FBT F1 F 0 1 N N N N N N -3.881 46.266 3.361 2.056 6.475 3.074 FBT DNU 8 DNU CBO C6 C 0 1 N N N N N N -5.729 45.271 4.364 0.767 6.945 1.068 CBO DNU 9 DNU NBP N3 N 0 1 N N N N N N -6.586 45.110 3.233 0.574 6.227 -0.211 NBP DNU 10 DNU CBQ C7 C 0 1 N N N N N N -6.936 46.399 2.672 0.980 7.103 -1.333 CBQ DNU 11 DNU CBR C8 C 0 1 N N N N N N -7.034 46.166 1.153 1.700 6.167 -2.335 CBR DNU 12 DNU CBS C9 C 0 1 N N N N N N -6.072 44.972 0.899 2.443 5.196 -1.378 CBS DNU 13 DNU CBL C10 C 0 1 N N S N N N -5.957 44.322 2.251 1.448 5.034 -0.212 CBL DNU 14 DNU CBK C11 C 0 1 N N N N N N -6.680 42.901 2.198 0.635 3.747 -0.369 CBK DNU 15 DNU OBI O1 O 0 1 N N N N N N -6.414 42.253 3.455 1.516 2.623 -0.357 OBI DNU 16 DNU C2 C12 C 0 1 Y N N N N N -7.391 41.254 3.789 0.952 1.399 -0.487 C2 DNU 17 DNU CAO C13 C 0 1 Y N N N N N -8.533 39.409 6.740 -2.339 -0.023 -0.879 CAO DNU 18 DNU FAT F2 F 0 1 N N N N N N -7.519 39.735 7.564 -3.152 1.056 -0.886 FAT DNU 19 DNU NAY N4 N 0 1 N N N N N N -9.964 39.448 1.935 2.085 -1.994 -0.590 NAY DNU 20 DNU CBD C14 C 0 1 N N N N N N -10.532 38.150 1.889 2.800 -2.097 0.689 CBD DNU 21 DNU CBC C15 C 0 1 N N N N N N -10.453 37.427 0.548 3.571 -3.421 0.733 CBC DNU 22 DNU CAZ C16 C 0 1 N N N N N N -9.881 40.248 0.685 3.019 -1.960 -1.723 CAZ DNU 23 DNU CBA C17 C 0 1 N N N N N N -10.650 39.690 -0.528 3.799 -3.278 -1.777 CBA DNU 24 DNU NBB N5 N 0 1 N N N N N N -10.632 38.269 -0.632 4.421 -3.507 -0.464 NBB DNU 25 DNU CBE C18 C 0 1 N N N N N N -10.778 37.572 -1.884 5.735 -3.789 -0.361 CBE DNU 26 DNU OBF O2 O 0 1 N N N N N N -10.750 36.380 -1.865 6.421 -3.856 -1.359 OBF DNU 27 DNU CBG C19 C 0 1 N N N N N N -10.959 38.301 -3.209 6.352 -4.020 0.995 CBG DNU 28 DNU CBH C20 C 0 1 N N N N N N -12.366 38.061 -3.782 7.844 -4.319 0.832 CBH DNU 29 DNU OBJ O3 O 0 1 N N N N N N -13.274 37.965 -2.678 8.429 -4.538 2.117 OBJ DNU 30 DNU CAR C21 C 0 1 Y N N N N N -10.241 38.393 4.942 -0.762 -2.294 -0.877 CAR DNU 31 DNU NAS N6 N 0 1 Y N N N N N -10.532 38.325 6.297 -2.066 -2.378 -1.003 NAS DNU 32 DNU CAN C22 C 0 1 Y N N N N N -9.483 38.469 7.145 -2.858 -1.304 -1.007 CAN DNU 33 DNU CAF C23 C 0 1 Y N N N N N -9.540 38.253 8.656 -4.320 -1.482 -1.153 CAF DNU 34 DNU CAA C24 C 0 1 Y N N N N N -8.542 37.468 9.325 -5.130 -1.694 -0.015 CAA DNU 35 DNU CAE C25 C 0 1 Y N N N N N -10.519 38.901 9.390 -4.910 -1.437 -2.406 CAE DNU 36 DNU CAD C26 C 0 1 Y N N N N N -10.608 38.806 10.772 -6.282 -1.604 -2.549 CAD DNU 37 DNU CAC C27 C 0 1 Y N N N N N -9.656 38.027 11.430 -7.082 -1.815 -1.467 CAC DNU 38 DNU CAB C28 C 0 1 Y N N N N N -8.629 37.364 10.699 -6.525 -1.862 -0.177 CAB DNU 39 DNU CAJ C29 C 0 1 Y N N N N N -7.727 36.622 11.481 -7.334 -2.074 0.954 CAJ DNU 40 DNU CAI C30 C 0 1 Y N N N N N -6.694 35.932 10.855 -6.776 -2.117 2.195 CAI DNU 41 DNU CAH C31 C 0 1 Y N N N N N -6.561 35.992 9.490 -5.405 -1.953 2.374 CAH DNU 42 DNU FAK F3 F 0 1 N N N N N N -5.561 35.346 8.822 -4.881 -2.000 3.618 FAK DNU 43 DNU CAG C32 C 0 1 Y N N N N N -7.477 36.747 8.705 -4.571 -1.742 1.283 CAG DNU 44 DNU CAL C33 C 0 1 N N N N N N -7.213 36.706 7.212 -3.162 -1.574 1.471 CAL DNU 45 DNU CAM C34 C 0 1 N N N N N N -6.992 36.670 6.054 -2.006 -1.437 1.625 CAM DNU 46 DNU H1 H1 H 0 1 N N N N N N -4.268 43.080 2.924 3.197 5.504 1.002 H1 DNU 47 DNU H2 H2 H 0 1 N N N N N N -3.805 44.394 1.790 2.329 4.019 1.506 H2 DNU 48 DNU H3 H3 H 0 1 N N N N N N -3.698 44.633 4.546 0.501 5.275 2.459 H3 DNU 49 DNU H4 H4 H 0 1 N N N N N N -5.835 46.275 4.800 -0.183 7.341 1.427 H4 DNU 50 DNU H5 H5 H 0 1 N N N N N N -5.943 44.513 5.132 1.490 7.752 0.946 H5 DNU 51 DNU H7 H7 H 0 1 N N N N N N -6.158 47.142 2.899 0.103 7.552 -1.798 H7 DNU 52 DNU H8 H8 H 0 1 N N N N N N -7.901 46.745 3.072 1.660 7.878 -0.981 H8 DNU 53 DNU H9 H9 H 0 1 N N N N N N -6.707 47.058 0.598 0.980 5.630 -2.954 H9 DNU 54 DNU H10 H10 H 0 1 N N N N N N -8.063 45.909 0.861 2.405 6.723 -2.952 H10 DNU 55 DNU H11 H11 H 0 1 N N N N N N -6.497 44.275 0.162 2.625 4.239 -1.866 H11 DNU 56 DNU H12 H12 H 0 1 N N N N N N -5.091 45.325 0.547 3.377 5.638 -1.030 H12 DNU 57 DNU H13 H13 H 0 1 N N N N N N -7.764 43.032 2.061 -0.073 3.663 0.456 H13 DNU 58 DNU H14 H14 H 0 1 N N N N N N -6.276 42.301 1.369 0.091 3.774 -1.313 H14 DNU 59 DNU H15 H15 H 0 1 N N N N N N -11.594 38.239 2.160 3.499 -1.266 0.783 H15 DNU 60 DNU H16 H16 H 0 1 N N N N N N -10.014 37.530 2.635 2.085 -2.065 1.510 H16 DNU 61 DNU H17 H17 H 0 1 N N N N N N -11.235 36.653 0.534 4.194 -3.452 1.628 H17 DNU 62 DNU H18 H18 H 0 1 N N N N N N -9.464 36.951 0.478 2.868 -4.254 0.748 H18 DNU 63 DNU H19 H19 H 0 1 N N N N N N -8.820 40.324 0.404 2.462 -1.829 -2.650 H19 DNU 64 DNU H20 H20 H 0 1 N N N N N N -10.276 41.252 0.901 3.715 -1.130 -1.596 H20 DNU 65 DNU H21 H21 H 0 1 N N N N N N -10.202 40.108 -1.442 3.118 -4.097 -2.007 H21 DNU 66 DNU H22 H22 H 0 1 N N N N N N -11.698 40.016 -0.451 4.570 -3.216 -2.545 H22 DNU 67 DNU H23 H23 H 0 1 N N N N N N -10.211 37.934 -3.927 6.225 -3.129 1.609 H23 DNU 68 DNU H24 H24 H 0 1 N N N N N N -10.815 39.380 -3.049 5.863 -4.866 1.477 H24 DNU 69 DNU H25 H25 H 0 1 N N N N N N -12.654 38.900 -4.432 7.971 -5.210 0.218 H25 DNU 70 DNU H26 H26 H 0 1 N N N N N N -12.380 37.126 -4.362 8.333 -3.473 0.350 H26 DNU 71 DNU H27 H27 H 0 1 N N N N N N -14.154 37.816 -3.003 9.375 -4.733 2.090 H27 DNU 72 DNU H28 H28 H 0 1 N N N N N N -10.724 37.705 4.264 -0.162 -3.192 -0.879 H28 DNU 73 DNU H29 H29 H 0 1 N N N N N N -11.244 39.506 8.865 -4.297 -1.271 -3.280 H29 DNU 74 DNU H30 H30 H 0 1 N N N N N N -11.387 39.317 11.319 -6.721 -1.564 -3.535 H30 DNU 75 DNU H31 H31 H 0 1 N N N N N N -9.698 37.926 12.504 -8.146 -1.941 -1.600 H31 DNU 76 DNU H32 H32 H 0 1 N N N N N N -7.835 36.588 12.555 -8.400 -2.203 0.838 H32 DNU 77 DNU H33 H33 H 0 1 N N N N N N -5.998 35.350 11.442 -7.407 -2.280 3.056 H33 DNU 78 DNU H34 H34 H 0 1 N N N N N N -6.793 36.638 5.013 -0.972 -1.315 1.763 H34 DNU 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DNU CBH CBG SING N N 1 DNU CBH OBJ SING N N 2 DNU CBG CBE SING N N 3 DNU CBE OBF DOUB N N 4 DNU CBE NBB SING N N 5 DNU NBB CBA SING N N 6 DNU NBB CBC SING N N 7 DNU CBA CAZ SING N N 8 DNU CBC CBD SING N N 9 DNU CAZ NAY SING N N 10 DNU CBS CBR SING N N 11 DNU CBS CBL SING N N 12 DNU CBR CBQ SING N N 13 DNU CBD NAY SING N N 14 DNU NAY C4 SING N N 15 DNU CBK CBL SING N N 16 DNU CBK OBI SING N N 17 DNU CBL CBM SING N N 18 DNU CBL NBP SING N N 19 DNU CBM CBN SING N N 20 DNU CBQ NBP SING N N 21 DNU N3 C4 DOUB Y N 22 DNU N3 C2 SING Y N 23 DNU C4 C5 SING Y N 24 DNU NBP CBO SING N N 25 DNU FBT CBN SING N N 26 DNU OBI C2 SING N N 27 DNU CBN CBO SING N N 28 DNU C2 N1 DOUB Y N 29 DNU C5 CAR DOUB Y N 30 DNU C5 C6 SING Y N 31 DNU CAR NAS SING Y N 32 DNU N1 C6 SING Y N 33 DNU C6 CAO DOUB Y N 34 DNU CAM CAL TRIP N N 35 DNU NAS CAN DOUB Y N 36 DNU CAO CAN SING Y N 37 DNU CAO FAT SING N N 38 DNU CAN CAF SING N N 39 DNU CAL CAG SING N N 40 DNU CAF CAA DOUB Y N 41 DNU CAF CAE SING Y N 42 DNU CAG CAA SING Y N 43 DNU CAG CAH DOUB Y N 44 DNU FAK CAH SING N N 45 DNU CAA CAB SING Y N 46 DNU CAE CAD DOUB Y N 47 DNU CAH CAI SING Y N 48 DNU CAB CAC DOUB Y N 49 DNU CAB CAJ SING Y N 50 DNU CAD CAC SING Y N 51 DNU CAI CAJ DOUB Y N 52 DNU CBM H1 SING N N 53 DNU CBM H2 SING N N 54 DNU CBN H3 SING N N 55 DNU CBO H4 SING N N 56 DNU CBO H5 SING N N 57 DNU CBQ H7 SING N N 58 DNU CBQ H8 SING N N 59 DNU CBR H9 SING N N 60 DNU CBR H10 SING N N 61 DNU CBS H11 SING N N 62 DNU CBS H12 SING N N 63 DNU CBK H13 SING N N 64 DNU CBK H14 SING N N 65 DNU CBD H15 SING N N 66 DNU CBD H16 SING N N 67 DNU CBC H17 SING N N 68 DNU CBC H18 SING N N 69 DNU CAZ H19 SING N N 70 DNU CAZ H20 SING N N 71 DNU CBA H21 SING N N 72 DNU CBA H22 SING N N 73 DNU CBG H23 SING N N 74 DNU CBG H24 SING N N 75 DNU CBH H25 SING N N 76 DNU CBH H26 SING N N 77 DNU OBJ H27 SING N N 78 DNU CAR H28 SING N N 79 DNU CAE H29 SING N N 80 DNU CAD H30 SING N N 81 DNU CAC H31 SING N N 82 DNU CAJ H32 SING N N 83 DNU CAI H33 SING N N 84 DNU CAM H34 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DNU InChI InChI 1.06 "InChI=1S/C34H33F3N6O3/c1-2-23-26(36)8-7-21-5-3-6-24(28(21)23)30-29(37)31-25(18-38-30)32(42-14-12-41(13-15-42)27(45)9-16-44)40-33(39-31)46-20-34-10-4-11-43(34)19-22(35)17-34/h1,3,5-8,18,22,44H,4,9-17,19-20H2/t22-,34+/m1/s1" DNU InChIKey InChI 1.06 WLNNSRZGRWTCCZ-JXNPFXPLSA-N DNU SMILES_CANONICAL CACTVS 3.385 "OCCC(=O)N1CCN(CC1)c2nc(OC[C@@]34CCCN3C[C@H](F)C4)nc5c(F)c(ncc25)c6cccc7ccc(F)c(C#C)c67" DNU SMILES CACTVS 3.385 "OCCC(=O)N1CCN(CC1)c2nc(OC[C]34CCCN3C[CH](F)C4)nc5c(F)c(ncc25)c6cccc7ccc(F)c(C#C)c67" DNU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C#Cc1c(ccc2c1c(ccc2)c3c(c4c(cn3)c(nc(n4)OC[C@@]56CCCN5C[C@@H](C6)F)N7CCN(CC7)C(=O)CCO)F)F" DNU SMILES "OpenEye OEToolkits" 2.0.7 "C#Cc1c(ccc2c1c(ccc2)c3c(c4c(cn3)c(nc(n4)OCC56CCCN5CC(C6)F)N7CCN(CC7)C(=O)CCO)F)F" # _pdbx_chem_comp_identifier.comp_id DNU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[4-[7-(8-ethynyl-7-fluoranyl-naphthalen-1-yl)-8-fluoranyl-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]pyrido[4,3-d]pyrimidin-4-yl]piperazin-1-yl]-3-oxidanyl-propan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DNU "Create component" 2023-06-02 PDBC DNU "Initial release" 2024-01-31 RCSB #