data_DNY # _chem_comp.id DNY _chem_comp.name "2-{(S)-(2-chlorophenyl)[3-(piperidin-1-yl)propoxy]methyl}-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H26 Cl N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-10-31 _chem_comp.pdbx_modified_date 2018-03-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 427.924 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DNY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6BH5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DNY C10 C1 C 0 1 N N N -24.111 23.436 2.122 2.119 0.434 0.519 C10 DNY 1 DNY C15 C2 C 0 1 N N N -26.429 21.396 -3.527 8.234 -0.571 0.223 C15 DNY 2 DNY C17 C3 C 0 1 N N N -26.037 23.839 -3.663 6.899 -2.579 -0.421 C17 DNY 3 DNY C21 C4 C 0 1 Y N N -24.664 20.188 3.255 -1.441 -0.910 -1.395 C21 DNY 4 DNY C22 C5 C 0 1 Y N N -24.063 19.105 3.965 -2.713 -1.636 -1.386 C22 DNY 5 DNY C24 C6 C 0 1 Y N N -23.447 18.698 6.354 -4.598 -1.845 0.120 C24 DNY 6 DNY C28 C7 C 0 1 Y N N -22.987 17.462 5.934 -5.165 -2.715 -0.816 C28 DNY 7 DNY C02 C8 C 0 1 Y N N -27.659 23.057 5.435 -1.224 2.985 0.188 C02 DNY 8 DNY C03 C9 C 0 1 Y N N -29.026 23.056 5.745 -1.399 4.240 -0.369 C03 DNY 9 DNY C04 C10 C 0 1 Y N N -29.936 22.560 4.813 -0.781 4.556 -1.564 C04 DNY 10 DNY C05 C11 C 0 1 Y N N -29.451 22.079 3.598 0.011 3.620 -2.203 C05 DNY 11 DNY C06 C12 C 0 1 Y N N -28.081 22.095 3.324 0.186 2.367 -1.646 C06 DNY 12 DNY C07 C13 C 0 1 Y N N -27.123 22.590 4.232 -0.427 2.051 -0.449 C07 DNY 13 DNY C08 C14 C 0 1 N N S -25.594 22.601 3.917 -0.237 0.684 0.158 C08 DNY 14 DNY C11 C15 C 0 1 N N N -23.926 23.024 0.618 3.375 -0.213 -0.069 C11 DNY 15 DNY C12 C16 C 0 1 N N N -25.218 22.493 -0.082 4.580 0.118 0.814 C12 DNY 16 DNY C14 C17 C 0 1 N N N -25.774 21.254 -2.152 6.994 -0.018 0.929 C14 DNY 17 DNY C16 C18 C 0 1 N N N -25.787 22.503 -4.322 8.191 -2.101 0.249 C16 DNY 18 DNY C18 C19 C 0 1 N N N -25.779 23.794 -2.145 5.698 -1.967 0.304 C18 DNY 19 DNY C19 C20 C 0 1 Y N N -24.951 21.221 4.120 -1.380 -0.210 -0.250 C19 DNY 20 DNY C23 C21 C 0 1 Y N N -23.991 19.517 5.326 -3.341 -1.292 -0.172 C23 DNY 21 DNY C25 C22 C 0 1 N N N -23.371 19.148 7.819 -5.301 -1.518 1.378 C25 DNY 22 DNY C29 C23 C 0 1 Y N N -23.078 17.088 4.555 -4.479 -2.998 -1.985 C29 DNY 23 DNY N13 N1 N 0 1 N N N -25.159 22.520 -1.586 5.786 -0.503 0.250 N13 DNY 24 DNY N20 N2 N 0 1 Y N N -24.546 20.841 5.440 -2.508 -0.428 0.491 N20 DNY 25 DNY N30 N3 N 0 1 Y N N -23.591 17.861 3.594 -3.302 -2.467 -2.237 N30 DNY 26 DNY O09 O1 O 0 1 N N N -25.412 23.093 2.603 0.994 0.125 -0.305 O09 DNY 27 DNY O26 O2 O 0 1 N N N -24.076 20.122 8.155 -4.791 -0.761 2.179 O26 DNY 28 DNY O27 O3 O 0 1 N N N -22.615 18.503 8.559 -6.506 -2.061 1.637 O27 DNY 29 DNY CL1 CL1 CL 0 0 N N N -26.581 23.691 6.647 -2.000 2.586 1.689 CL1 DNY 30 DNY H1 H1 H 0 1 N N N -23.356 22.916 2.730 1.949 0.049 1.525 H1 DNY 31 DNY H2 H2 H 0 1 N N N -23.971 24.523 2.215 2.253 1.515 0.562 H2 DNY 32 DNY H3 H3 H 0 1 N N N -27.497 21.622 -3.394 8.249 -0.225 -0.811 H3 DNY 33 DNY H4 H4 H 0 1 N N N -26.320 20.449 -4.076 9.131 -0.223 0.736 H4 DNY 34 DNY H5 H5 H 0 1 N N N -25.369 24.588 -4.114 6.893 -2.265 -1.465 H5 DNY 35 DNY H6 H6 H 0 1 N N N -27.084 24.130 -3.836 6.842 -3.666 -0.368 H6 DNY 36 DNY H7 H7 H 0 1 N N N -24.865 20.196 2.194 -0.692 -0.936 -2.173 H7 DNY 37 DNY H8 H8 H 0 1 N N N -22.558 16.777 6.650 -6.130 -3.162 -0.629 H8 DNY 38 DNY H9 H9 H 0 1 N N N -29.370 23.435 6.696 -2.018 4.971 0.130 H9 DNY 39 DNY H10 H10 H 0 1 N N N -30.994 22.549 5.028 -0.917 5.536 -1.999 H10 DNY 40 DNY H11 H11 H 0 1 N N N -30.140 21.691 2.862 0.493 3.868 -3.137 H11 DNY 41 DNY H12 H12 H 0 1 N N N -27.741 21.711 2.374 0.804 1.636 -2.146 H12 DNY 42 DNY H13 H13 H 0 1 N N N -25.121 23.294 4.628 -0.212 0.769 1.244 H13 DNY 43 DNY H14 H14 H 0 1 N N N -23.163 22.233 0.572 3.241 -1.294 -0.111 H14 DNY 44 DNY H15 H15 H 0 1 N N N -23.574 23.906 0.063 3.545 0.172 -1.074 H15 DNY 45 DNY H16 H16 H 0 1 N N N -26.066 23.114 0.241 4.714 1.199 0.857 H16 DNY 46 DNY H17 H17 H 0 1 N N N -25.382 21.454 0.238 4.410 -0.267 1.820 H17 DNY 47 DNY H18 H18 H 0 1 N N N -26.542 20.905 -1.446 6.987 -0.353 1.966 H18 DNY 48 DNY H19 H19 H 0 1 N N N -24.979 20.498 -2.232 7.015 1.072 0.899 H19 DNY 49 DNY H20 H20 H 0 1 N N N -26.212 22.514 -5.336 9.050 -2.500 -0.290 H20 DNY 50 DNY H21 H21 H 0 1 N N N -24.703 22.325 -4.381 8.215 -2.448 1.282 H21 DNY 51 DNY H22 H22 H 0 1 N N N -25.104 24.627 -1.898 4.778 -2.294 -0.180 H22 DNY 52 DNY H23 H23 H 0 1 N N N -26.745 23.942 -1.640 5.697 -2.293 1.344 H23 DNY 53 DNY H24 H24 H 0 1 N N N -22.706 16.114 4.272 -4.920 -3.670 -2.706 H24 DNY 54 DNY H26 H26 H 0 1 N N N -24.631 21.386 6.274 -2.692 -0.032 1.357 H26 DNY 55 DNY H27 H27 H 0 1 N N N -22.649 18.863 9.438 -6.927 -1.817 2.473 H27 DNY 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DNY C16 C17 SING N N 1 DNY C16 C15 SING N N 2 DNY C17 C18 SING N N 3 DNY C15 C14 SING N N 4 DNY C14 N13 SING N N 5 DNY C18 N13 SING N N 6 DNY N13 C12 SING N N 7 DNY C12 C11 SING N N 8 DNY C11 C10 SING N N 9 DNY C10 O09 SING N N 10 DNY O09 C08 SING N N 11 DNY C21 C22 SING Y N 12 DNY C21 C19 DOUB Y N 13 DNY C06 C05 DOUB Y N 14 DNY C06 C07 SING Y N 15 DNY N30 C22 DOUB Y N 16 DNY N30 C29 SING Y N 17 DNY C05 C04 SING Y N 18 DNY C08 C19 SING N N 19 DNY C08 C07 SING N N 20 DNY C22 C23 SING Y N 21 DNY C19 N20 SING Y N 22 DNY C07 C02 DOUB Y N 23 DNY C29 C28 DOUB Y N 24 DNY C04 C03 DOUB Y N 25 DNY C23 N20 SING Y N 26 DNY C23 C24 DOUB Y N 27 DNY C02 C03 SING Y N 28 DNY C02 CL1 SING N N 29 DNY C28 C24 SING Y N 30 DNY C24 C25 SING N N 31 DNY C25 O26 DOUB N N 32 DNY C25 O27 SING N N 33 DNY C10 H1 SING N N 34 DNY C10 H2 SING N N 35 DNY C15 H3 SING N N 36 DNY C15 H4 SING N N 37 DNY C17 H5 SING N N 38 DNY C17 H6 SING N N 39 DNY C21 H7 SING N N 40 DNY C28 H8 SING N N 41 DNY C03 H9 SING N N 42 DNY C04 H10 SING N N 43 DNY C05 H11 SING N N 44 DNY C06 H12 SING N N 45 DNY C08 H13 SING N N 46 DNY C11 H14 SING N N 47 DNY C11 H15 SING N N 48 DNY C12 H16 SING N N 49 DNY C12 H17 SING N N 50 DNY C14 H18 SING N N 51 DNY C14 H19 SING N N 52 DNY C16 H20 SING N N 53 DNY C16 H21 SING N N 54 DNY C18 H22 SING N N 55 DNY C18 H23 SING N N 56 DNY C29 H24 SING N N 57 DNY N20 H26 SING N N 58 DNY O27 H27 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DNY SMILES ACDLabs 12.01 "C(OC(c1c(cccc1)Cl)c3cc2c(c(C(=O)O)ccn2)n3)CCN4CCCCC4" DNY InChI InChI 1.03 "InChI=1S/C23H26ClN3O3/c24-18-8-3-2-7-16(18)22(30-14-6-13-27-11-4-1-5-12-27)20-15-19-21(26-20)17(23(28)29)9-10-25-19/h2-3,7-10,15,22,26H,1,4-6,11-14H2,(H,28,29)/t22-/m0/s1" DNY InChIKey InChI 1.03 MNARMTUGWVPRGA-QFIPXVFZSA-N DNY SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccnc2cc([nH]c12)[C@@H](OCCCN3CCCCC3)c4ccccc4Cl" DNY SMILES CACTVS 3.385 "OC(=O)c1ccnc2cc([nH]c12)[CH](OCCCN3CCCCC3)c4ccccc4Cl" DNY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)[C@@H](c2cc3c([nH]2)c(ccn3)C(=O)O)OCCCN4CCCCC4)Cl" DNY SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)C(c2cc3c([nH]2)c(ccn3)C(=O)O)OCCCN4CCCCC4)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DNY "SYSTEMATIC NAME" ACDLabs 12.01 "2-{(S)-(2-chlorophenyl)[3-(piperidin-1-yl)propoxy]methyl}-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid" DNY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(~{S})-(2-chlorophenyl)-(3-piperidin-1-ylpropoxy)methyl]-1~{H}-pyrrolo[3,2-b]pyridine-7-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DNY "Create component" 2017-10-31 RCSB DNY "Initial release" 2018-03-28 RCSB #