data_DO5 # _chem_comp.id DO5 _chem_comp.name "(2~{R},3~{R})-2-(4-chlorophenyl)-3-oxidanyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 Cl N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-01-24 _chem_comp.pdbx_modified_date 2018-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 387.857 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DO5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6FK7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DO5 C10 C1 C 0 1 N N N -236.744 46.647 35.869 2.319 1.731 -1.321 C10 DO5 1 DO5 C11 C2 C 0 1 N N N -235.587 46.139 35.002 0.918 1.279 -1.747 C11 DO5 2 DO5 C13 C3 C 0 1 N N N -233.460 45.390 36.056 -1.085 1.696 -0.404 C13 DO5 3 DO5 C15 C4 C 0 1 Y N N -234.783 43.357 36.665 -2.778 0.162 0.512 C15 DO5 4 DO5 C16 C5 C 0 1 Y N N -234.523 43.438 38.031 -2.655 -0.946 1.329 C16 DO5 5 DO5 C17 C6 C 0 1 Y N N -235.406 42.860 38.936 -3.411 -2.076 1.080 C17 DO5 6 DO5 C18 C7 C 0 1 Y N N -236.536 42.212 38.446 -4.291 -2.098 0.013 C18 DO5 7 DO5 C20 C8 C 0 1 Y N N -236.810 42.119 37.096 -4.414 -0.988 -0.805 C20 DO5 8 DO5 C21 C9 C 0 1 Y N N -235.921 42.698 36.204 -3.657 0.141 -0.555 C21 DO5 9 DO5 C22 C10 C 0 1 N N R -232.479 43.125 35.770 -2.891 2.581 1.046 C22 DO5 10 DO5 C23 C11 C 0 1 N N N -232.724 41.601 35.687 -2.064 3.800 1.460 C23 DO5 11 DO5 C26 C12 C 0 1 N N N -234.060 47.813 36.001 0.604 0.176 0.507 C26 DO5 12 DO5 C27 C13 C 0 1 N N N -235.184 48.405 36.853 2.008 0.634 0.917 C27 DO5 13 DO5 C1 C14 C 0 1 Y N N -239.243 50.405 36.701 6.108 -0.360 0.828 C1 DO5 14 DO5 C2 C15 C 0 1 Y N N -238.186 49.627 36.308 4.904 -0.072 0.206 C2 DO5 15 DO5 C3 C16 C 0 1 Y N N -237.579 49.772 35.051 4.173 -1.093 -0.395 C3 DO5 16 DO5 C4 C17 C 0 1 Y N N -238.003 50.702 34.133 4.653 -2.392 -0.368 C4 DO5 17 DO5 C5 C18 C 0 1 Y N N -239.085 51.502 34.529 5.856 -2.673 0.254 C5 DO5 18 DO5 C6 C19 C 0 1 Y N N -239.681 51.359 35.768 6.582 -1.659 0.850 C6 DO5 19 DO5 O7 O1 O 0 1 N N N -236.559 48.869 34.935 3.038 -0.559 -0.935 O7 DO5 20 DO5 C8 C20 C 0 1 N N N -236.519 48.136 36.159 2.892 0.730 -0.322 C8 DO5 21 DO5 O9 O2 O 0 1 N N N -237.559 48.627 37.003 4.228 1.104 0.046 O9 DO5 22 DO5 N12 N1 N 0 1 N N N -234.320 46.402 35.704 0.102 1.073 -0.543 N12 DO5 23 DO5 C14 C21 C 0 1 N N R -233.811 43.955 35.699 -1.958 1.397 0.787 C14 DO5 24 DO5 CL CL1 CL 0 0 N N N -237.640 41.495 39.559 -5.240 -3.517 -0.301 CL DO5 25 DO5 O24 O3 O 0 1 N N N -231.706 43.445 34.656 -3.621 2.882 -0.145 O24 DO5 26 DO5 O25 O4 O 0 1 N N N -232.413 45.667 36.642 -1.451 2.497 -1.238 O25 DO5 27 DO5 H1 H1 H 0 1 N N N -237.695 46.513 35.333 2.967 1.783 -2.196 H1 DO5 28 DO5 H2 H2 H 0 1 N N N -236.773 46.085 36.814 2.258 2.715 -0.855 H2 DO5 29 DO5 H3 H3 H 0 1 N N N -235.591 46.664 34.035 0.461 2.047 -2.372 H3 DO5 30 DO5 H4 H4 H 0 1 N N N -235.699 45.058 34.832 0.989 0.345 -2.305 H4 DO5 31 DO5 H5 H5 H 0 1 N N N -233.639 43.948 38.386 -1.967 -0.928 2.162 H5 DO5 32 DO5 H6 H6 H 0 1 N N N -235.219 42.913 39.998 -3.314 -2.941 1.718 H6 DO5 33 DO5 H7 H7 H 0 1 N N N -237.694 41.608 36.744 -5.101 -1.005 -1.638 H7 DO5 34 DO5 H8 H8 H 0 1 N N N -236.112 42.638 35.143 -3.753 1.007 -1.193 H8 DO5 35 DO5 H9 H9 H 0 1 N N N -231.957 43.361 36.709 -3.588 2.327 1.845 H9 DO5 36 DO5 H10 H10 H 0 1 N N N -233.334 41.280 36.544 -2.733 4.618 1.731 H10 DO5 37 DO5 H11 H11 H 0 1 N N N -233.253 41.365 34.752 -1.439 3.543 2.315 H11 DO5 38 DO5 H12 H12 H 0 1 N N N -231.759 41.073 35.705 -1.432 4.110 0.628 H12 DO5 39 DO5 H13 H13 H 0 1 N N N -233.110 47.897 36.549 0.648 -0.844 0.125 H13 DO5 40 DO5 H14 H14 H 0 1 N N N -233.990 48.373 35.057 -0.060 0.215 1.371 H14 DO5 41 DO5 H15 H15 H 0 1 N N N -235.182 47.934 37.847 1.946 1.611 1.396 H15 DO5 42 DO5 H16 H16 H 0 1 N N N -235.035 49.489 36.961 2.436 -0.086 1.614 H16 DO5 43 DO5 H17 H17 H 0 1 N N N -239.710 50.292 37.668 6.677 0.430 1.296 H17 DO5 44 DO5 H18 H18 H 0 1 N N N -237.533 50.810 33.167 4.088 -3.187 -0.834 H18 DO5 45 DO5 H19 H19 H 0 1 N N N -239.463 52.250 33.847 6.228 -3.686 0.274 H19 DO5 46 DO5 H20 H20 H 0 1 N N N -240.510 52.001 36.027 7.521 -1.882 1.334 H20 DO5 47 DO5 H21 H21 H 0 1 N N N -234.213 43.910 34.676 -1.332 1.229 1.663 H21 DO5 48 DO5 H22 H22 H 0 1 N N N -231.523 44.377 34.654 -4.234 3.625 -0.053 H22 DO5 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DO5 C4 C5 DOUB Y N 1 DO5 C4 C3 SING Y N 2 DO5 C5 C6 SING Y N 3 DO5 O24 C22 SING N N 4 DO5 O7 C3 SING N N 5 DO5 O7 C8 SING N N 6 DO5 C11 N12 SING N N 7 DO5 C11 C10 SING N N 8 DO5 C3 C2 DOUB Y N 9 DO5 C23 C22 SING N N 10 DO5 C14 C22 SING N N 11 DO5 C14 C13 SING N N 12 DO5 C14 C15 SING N N 13 DO5 N12 C26 SING N N 14 DO5 N12 C13 SING N N 15 DO5 C6 C1 DOUB Y N 16 DO5 C10 C8 SING N N 17 DO5 C26 C27 SING N N 18 DO5 C13 O25 DOUB N N 19 DO5 C8 C27 SING N N 20 DO5 C8 O9 SING N N 21 DO5 C21 C15 DOUB Y N 22 DO5 C21 C20 SING Y N 23 DO5 C2 C1 SING Y N 24 DO5 C2 O9 SING N N 25 DO5 C15 C16 SING Y N 26 DO5 C20 C18 DOUB Y N 27 DO5 C16 C17 DOUB Y N 28 DO5 C18 C17 SING Y N 29 DO5 C18 CL SING N N 30 DO5 C10 H1 SING N N 31 DO5 C10 H2 SING N N 32 DO5 C11 H3 SING N N 33 DO5 C11 H4 SING N N 34 DO5 C16 H5 SING N N 35 DO5 C17 H6 SING N N 36 DO5 C20 H7 SING N N 37 DO5 C21 H8 SING N N 38 DO5 C22 H9 SING N N 39 DO5 C23 H10 SING N N 40 DO5 C23 H11 SING N N 41 DO5 C23 H12 SING N N 42 DO5 C26 H13 SING N N 43 DO5 C26 H14 SING N N 44 DO5 C27 H15 SING N N 45 DO5 C27 H16 SING N N 46 DO5 C1 H17 SING N N 47 DO5 C4 H18 SING N N 48 DO5 C5 H19 SING N N 49 DO5 C6 H20 SING N N 50 DO5 C14 H21 SING N N 51 DO5 O24 H22 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DO5 InChI InChI 1.03 "InChI=1S/C21H22ClNO4/c1-14(24)19(15-6-8-16(22)9-7-15)20(25)23-12-10-21(11-13-23)26-17-4-2-3-5-18(17)27-21/h2-9,14,19,24H,10-13H2,1H3/t14-,19+/m1/s1" DO5 InChIKey InChI 1.03 GYIGPNZLXGKQBD-KUHUBIRLSA-N DO5 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H](C(=O)N1CCC2(CC1)Oc3ccccc3O2)c4ccc(Cl)cc4" DO5 SMILES CACTVS 3.385 "C[CH](O)[CH](C(=O)N1CCC2(CC1)Oc3ccccc3O2)c4ccc(Cl)cc4" DO5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]([C@@H](c1ccc(cc1)Cl)C(=O)N2CCC3(CC2)Oc4ccccc4O3)O" DO5 SMILES "OpenEye OEToolkits" 2.0.6 "CC(C(c1ccc(cc1)Cl)C(=O)N2CCC3(CC2)Oc4ccccc4O3)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DO5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{R})-2-(4-chlorophenyl)-3-oxidanyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DO5 "Create component" 2018-01-24 EBI DO5 "Initial release" 2018-04-04 RCSB #