data_DOL # _chem_comp.id DOL _chem_comp.name "5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H50 N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms DALFOPRISTIN _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-09-26 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 690.847 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DOL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1MRL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DOL O7 O7 O 0 1 N N N 26.083 52.829 56.969 -1.684 -1.606 0.734 O7 DOL 1 DOL C6 C6 C 0 1 N N N 26.563 54.094 56.641 -1.905 -0.412 0.804 C6 DOL 2 DOL N5 N5 N 0 1 N N N 25.973 55.290 57.251 -1.074 0.322 1.539 N5 DOL 3 DOL C4 C4 C 0 1 N N N 26.812 56.357 56.701 -1.276 1.678 2.115 C4 DOL 4 DOL C3 C3 C 0 1 N N N 27.918 56.533 57.747 -0.668 1.546 3.535 C3 DOL 5 DOL C2 C2 C 0 1 N N R 27.433 55.805 58.989 0.428 0.462 3.397 C2 DOL 6 DOL S39 S39 S 0 1 N N N 27.772 56.812 60.414 0.112 -0.905 4.547 S39 DOL 7 DOL O41 O41 O 0 1 N N N 27.144 58.429 60.101 1.172 -1.847 4.446 O41 DOL 8 DOL O40 O40 O 0 1 N N N 27.021 56.111 61.845 -1.230 -1.340 4.389 O40 DOL 9 DOL C42 C42 C 0 1 N N N 29.542 56.857 60.636 0.263 -0.012 6.118 C42 DOL 10 DOL C43 C43 C 0 1 N N N 30.153 57.887 59.694 0.032 -0.981 7.280 C43 DOL 11 DOL N44 N44 N 0 1 N N N 30.684 58.893 60.598 0.261 -0.284 8.552 N44 DOL 12 DOL C47 C47 C 0 1 N N N 32.114 59.185 60.604 -0.882 0.615 8.753 C47 DOL 13 DOL C48 C48 C 0 1 N N N 32.474 60.082 59.437 -0.707 1.377 10.068 C48 DOL 14 DOL C45 C45 C 0 1 N N N 29.772 59.579 61.505 0.189 -1.301 9.610 C45 DOL 15 DOL C46 C46 C 0 1 N N N 30.182 61.023 61.691 1.568 -1.934 9.803 C46 DOL 16 DOL C1 C1 C 0 1 N N S 25.961 55.749 58.657 0.318 -0.027 1.933 C1 DOL 17 DOL C8 C8 C 0 1 Y N N 27.685 54.413 55.689 -3.061 0.102 0.076 C8 DOL 18 DOL C12 C12 C 0 1 Y N N 28.525 55.685 55.503 -4.025 0.960 0.474 C12 DOL 19 DOL O11 O11 O 0 1 Y N N 29.114 55.576 54.192 -4.819 1.203 -0.575 O11 DOL 20 DOL N9 N9 N 0 1 Y N N 27.692 53.657 54.493 -3.311 -0.186 -1.241 N9 DOL 21 DOL C10 C10 C 0 1 Y N N 28.603 54.359 53.644 -4.337 0.510 -1.618 C10 DOL 22 DOL C13 C13 C 0 1 N N N 28.839 53.738 52.294 -4.934 0.545 -3.012 C13 DOL 23 DOL C14 C14 C 0 1 N N N 27.572 52.884 52.277 -3.876 0.141 -3.996 C14 DOL 24 DOL O15 O15 O 0 1 N N N 27.457 51.828 53.236 -3.097 -0.727 -3.685 O15 DOL 25 DOL C16 C16 C 0 1 N N N 26.385 53.145 51.355 -3.745 0.772 -5.351 C16 DOL 26 DOL C17 C17 C 0 1 N N S 25.164 52.379 51.872 -2.994 -0.168 -6.299 C17 DOL 27 DOL O18 O18 O 0 1 N N N 24.235 52.160 50.808 -3.069 -1.504 -5.799 O18 DOL 28 DOL C19 C19 C 0 1 N N N 24.490 53.194 52.967 -1.553 0.248 -6.396 C19 DOL 29 DOL C20 C20 C 0 1 N N N 23.540 52.404 53.863 -0.635 -0.586 -6.862 C20 DOL 30 DOL C21 C21 C 0 1 N N N 23.289 50.917 53.641 -1.035 -1.952 -7.347 C21 DOL 31 DOL C22 C22 C 0 1 N N N 22.577 53.237 54.694 0.780 -0.171 -6.919 C22 DOL 32 DOL C23 C23 C 0 1 N N N 21.504 52.431 55.407 1.722 -1.087 -7.129 C23 DOL 33 DOL C24 C24 C 0 1 N N N 20.683 53.448 56.180 3.179 -0.689 -7.148 C24 DOL 34 DOL N25 N25 N 0 1 N N N 21.634 54.210 56.955 3.770 -1.101 -5.853 N25 DOL 35 DOL C26 C26 C 0 1 N N N 21.259 54.860 58.186 3.817 -0.171 -4.868 C26 DOL 36 DOL O27 O27 O 0 1 N N N 19.889 54.805 58.578 3.756 1.012 -5.139 O27 DOL 37 DOL C28 C28 C 0 1 N N N 22.071 56.056 58.632 3.943 -0.607 -3.470 C28 DOL 38 DOL C29 C29 C 0 1 N N N 21.875 56.253 60.124 4.088 0.309 -2.515 C29 DOL 39 DOL C30 C30 C 0 1 N N R 22.701 57.460 60.531 4.173 -0.127 -1.075 C30 DOL 40 DOL C31 C31 C 0 1 N N N 21.908 58.252 61.571 5.635 -0.113 -0.624 C31 DOL 41 DOL C32 C32 C 0 1 N N R 24.169 57.168 60.926 3.361 0.827 -0.199 C32 DOL 42 DOL C33 C33 C 0 1 N N N 24.470 57.618 62.363 2.623 1.825 -1.093 C33 DOL 43 DOL C35 C35 C 0 1 N N N 24.988 59.052 62.450 1.239 1.272 -1.440 C35 DOL 44 DOL C34 C34 C 0 1 N N N 23.289 57.402 63.306 2.469 3.156 -0.353 C34 DOL 45 DOL O36 O36 O 0 1 N N N 24.580 55.786 60.875 2.397 0.086 0.593 O36 DOL 46 DOL C37 C37 C 0 1 N N N 24.946 55.139 59.636 1.289 0.696 1.039 C37 DOL 47 DOL O38 O38 O 0 1 N N N 24.304 53.898 59.320 1.068 1.840 0.720 O38 DOL 48 DOL HC41 1HC4 H 0 0 N N N 27.184 56.162 55.668 -2.337 1.920 2.170 HC41 DOL 49 DOL HC42 2HC4 H 0 0 N N N 26.260 57.293 56.454 -0.739 2.428 1.534 HC42 DOL 50 DOL HC31 1HC3 H 0 0 N N N 28.921 56.196 57.396 -1.431 1.227 4.246 HC31 DOL 51 DOL HC3A 2HC3 H 0 0 N N N 28.191 57.598 57.932 -0.229 2.493 3.849 HC3A DOL 52 DOL HC2 HC2 H 0 1 N N N 27.889 54.814 59.220 1.412 0.892 3.581 HC2 DOL 53 DOL H421 1H42 H 0 0 N N N 29.827 57.038 61.698 -0.479 0.784 6.156 H421 DOL 54 DOL H422 2H42 H 0 0 N N N 30.005 55.850 60.514 1.262 0.417 6.198 H422 DOL 55 DOL H431 1H43 H 0 0 N N N 30.896 57.472 58.973 0.722 -1.820 7.196 H431 DOL 56 DOL H432 2H43 H 0 0 N N N 29.452 58.281 58.921 -0.993 -1.349 7.247 H432 DOL 57 DOL H471 1H47 H 0 0 N N N 32.445 59.616 61.577 -1.801 0.031 8.791 H471 DOL 58 DOL H472 2H47 H 0 0 N N N 32.728 58.254 60.617 -0.936 1.324 7.927 H472 DOL 59 DOL H481 1H48 H 0 0 N N N 33.566 60.305 59.441 -1.556 2.045 10.217 H481 DOL 60 DOL H482 2H48 H 0 0 N N N 32.142 59.650 58.463 -0.653 0.668 10.894 H482 DOL 61 DOL H483 3H48 H 0 0 N N N 31.860 61.012 59.423 0.212 1.961 10.030 H483 DOL 62 DOL H451 1H45 H 0 0 N N N 28.712 59.491 61.168 -0.130 -0.834 10.541 H451 DOL 63 DOL H452 2H45 H 0 0 N N N 29.683 59.046 62.480 -0.527 -2.071 9.325 H452 DOL 64 DOL H461 1H46 H 0 0 N N N 29.484 61.547 62.384 1.507 -2.713 10.563 H461 DOL 65 DOL H462 2H46 H 0 0 N N N 31.241 61.110 62.027 1.903 -2.370 8.862 H462 DOL 66 DOL H463 3H46 H 0 0 N N N 30.270 61.555 60.715 2.277 -1.170 10.123 H463 DOL 67 DOL HC1 HC1 H 0 1 N N N 25.481 56.746 58.796 0.455 -1.102 1.870 HC1 DOL 68 DOL HC12 HC12 H 0 0 N N N 28.678 56.531 56.192 -4.135 1.377 1.464 HC12 DOL 69 DOL H131 1H13 H 0 0 N N N 29.002 54.429 51.434 -5.277 1.555 -3.238 H131 DOL 70 DOL H132 2H13 H 0 0 N N N 29.810 53.215 52.133 -5.771 -0.150 -3.069 H132 DOL 71 DOL H161 1H16 H 0 0 N N N 26.178 54.233 51.229 -3.196 1.709 -5.262 H161 DOL 72 DOL H162 2H16 H 0 0 N N N 26.615 52.904 50.291 -4.738 0.973 -5.753 H162 DOL 73 DOL HC17 HC17 H 0 0 N N N 25.493 51.393 52.277 -3.450 -0.125 -7.288 HC17 DOL 74 DOL HO18 HO18 H 0 0 N N N 23.477 51.684 51.128 -3.998 -1.770 -5.850 HO18 DOL 75 DOL HC19 HC19 H 0 0 N N N 24.675 54.273 53.100 -1.230 1.232 -6.085 HC19 DOL 76 DOL H211 1H21 H 0 0 N N N 22.595 50.339 54.295 -0.184 -2.430 -7.832 H211 DOL 77 DOL H212 2H21 H 0 0 N N N 22.959 50.778 52.584 -1.358 -2.558 -6.500 H212 DOL 78 DOL H213 3H21 H 0 0 N N N 24.275 50.398 53.644 -1.854 -1.858 -8.060 H213 DOL 79 DOL HC22 HC22 H 0 0 N N N 22.650 54.334 54.773 1.025 0.876 -6.825 HC22 DOL 80 DOL HC23 HC23 H 0 0 N N N 21.353 51.339 55.371 1.461 -2.124 -7.291 HC23 DOL 81 DOL H241 1H24 H 0 0 N N N 20.027 54.076 55.533 3.266 0.389 -7.269 H241 DOL 82 DOL H242 2H24 H 0 0 N N N 19.869 52.993 56.792 3.690 -1.197 -7.967 H242 DOL 83 DOL HN25 HN25 H 0 0 N N N 22.595 54.291 56.624 4.109 -1.999 -5.716 HN25 DOL 84 DOL HC28 HC28 H 0 0 N N N 22.701 56.681 57.977 3.906 -1.660 -3.218 HC28 DOL 85 DOL HC29 HC29 H 0 0 N N N 21.248 55.634 60.788 4.168 1.362 -2.754 HC29 DOL 86 DOL HC30 HC30 H 0 0 N N N 22.856 58.091 59.625 3.774 -1.137 -0.978 HC30 DOL 87 DOL H311 1H31 H 0 0 N N N 22.514 59.138 61.869 6.215 -0.794 -1.248 H311 DOL 88 DOL H312 2H31 H 0 0 N N N 20.888 58.528 61.214 6.035 0.896 -0.720 H312 DOL 89 DOL H313 3H31 H 0 0 N N N 21.599 57.628 62.442 5.698 -0.432 0.415 H313 DOL 90 DOL HC32 HC32 H 0 0 N N N 24.730 57.740 60.150 4.035 1.368 0.465 HC32 DOL 91 DOL HC33 HC33 H 0 0 N N N 25.298 56.955 62.706 3.192 1.982 -2.009 HC33 DOL 92 DOL H351 1H35 H 0 0 N N N 25.206 59.378 63.493 0.519 2.090 -1.474 H351 DOL 93 DOL H352 2H35 H 0 0 N N N 25.880 59.191 61.796 1.278 0.780 -2.412 H352 DOL 94 DOL H353 3H35 H 0 0 N N N 24.283 59.758 61.952 0.935 0.552 -0.680 H353 DOL 95 DOL H341 1H34 H 0 0 N N N 23.507 57.728 64.349 2.557 2.987 0.719 H341 DOL 96 DOL H342 2H34 H 0 0 N N N 22.369 57.897 62.915 3.250 3.844 -0.678 H342 DOL 97 DOL H343 3H34 H 0 0 N N N 22.946 56.341 63.282 1.492 3.584 -0.576 H343 DOL 98 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DOL O7 C6 DOUB N N 1 DOL C6 N5 SING N N 2 DOL C6 C8 SING N N 3 DOL N5 C4 SING N N 4 DOL N5 C1 SING N N 5 DOL C4 C3 SING N N 6 DOL C4 HC41 SING N N 7 DOL C4 HC42 SING N N 8 DOL C3 C2 SING N N 9 DOL C3 HC31 SING N N 10 DOL C3 HC3A SING N N 11 DOL C2 S39 SING N N 12 DOL C2 C1 SING N N 13 DOL C2 HC2 SING N N 14 DOL S39 O41 DOUB N N 15 DOL S39 O40 DOUB N N 16 DOL S39 C42 SING N N 17 DOL C42 C43 SING N N 18 DOL C42 H421 SING N N 19 DOL C42 H422 SING N N 20 DOL C43 N44 SING N N 21 DOL C43 H431 SING N N 22 DOL C43 H432 SING N N 23 DOL N44 C47 SING N N 24 DOL N44 C45 SING N N 25 DOL C47 C48 SING N N 26 DOL C47 H471 SING N N 27 DOL C47 H472 SING N N 28 DOL C48 H481 SING N N 29 DOL C48 H482 SING N N 30 DOL C48 H483 SING N N 31 DOL C45 C46 SING N N 32 DOL C45 H451 SING N N 33 DOL C45 H452 SING N N 34 DOL C46 H461 SING N N 35 DOL C46 H462 SING N N 36 DOL C46 H463 SING N N 37 DOL C1 C37 SING N N 38 DOL C1 HC1 SING N N 39 DOL C8 C12 DOUB Y N 40 DOL C8 N9 SING Y N 41 DOL C12 O11 SING Y N 42 DOL C12 HC12 SING N N 43 DOL O11 C10 SING Y N 44 DOL N9 C10 DOUB Y N 45 DOL C10 C13 SING N N 46 DOL C13 C14 SING N N 47 DOL C13 H131 SING N N 48 DOL C13 H132 SING N N 49 DOL C14 O15 DOUB N N 50 DOL C14 C16 SING N N 51 DOL C16 C17 SING N N 52 DOL C16 H161 SING N N 53 DOL C16 H162 SING N N 54 DOL C17 O18 SING N N 55 DOL C17 C19 SING N N 56 DOL C17 HC17 SING N N 57 DOL O18 HO18 SING N N 58 DOL C19 C20 DOUB N E 59 DOL C19 HC19 SING N N 60 DOL C20 C21 SING N N 61 DOL C20 C22 SING N N 62 DOL C21 H211 SING N N 63 DOL C21 H212 SING N N 64 DOL C21 H213 SING N N 65 DOL C22 C23 DOUB N E 66 DOL C22 HC22 SING N N 67 DOL C23 C24 SING N N 68 DOL C23 HC23 SING N N 69 DOL C24 N25 SING N N 70 DOL C24 H241 SING N N 71 DOL C24 H242 SING N N 72 DOL N25 C26 SING N N 73 DOL N25 HN25 SING N N 74 DOL C26 O27 DOUB N N 75 DOL C26 C28 SING N N 76 DOL C28 C29 DOUB N E 77 DOL C28 HC28 SING N N 78 DOL C29 C30 SING N N 79 DOL C29 HC29 SING N N 80 DOL C30 C31 SING N N 81 DOL C30 C32 SING N N 82 DOL C30 HC30 SING N N 83 DOL C31 H311 SING N N 84 DOL C31 H312 SING N N 85 DOL C31 H313 SING N N 86 DOL C32 C33 SING N N 87 DOL C32 O36 SING N N 88 DOL C32 HC32 SING N N 89 DOL C33 C35 SING N N 90 DOL C33 C34 SING N N 91 DOL C33 HC33 SING N N 92 DOL C35 H351 SING N N 93 DOL C35 H352 SING N N 94 DOL C35 H353 SING N N 95 DOL C34 H341 SING N N 96 DOL C34 H342 SING N N 97 DOL C34 H343 SING N N 98 DOL O36 C37 SING N N 99 DOL C37 O38 DOUB N N 100 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DOL SMILES ACDLabs 10.04 "O=S(=O)(CCN(CC)CC)C3CCN2C(=O)c1nc(oc1)CC(=O)CC(O)C=C(C=CCNC(=O)C=CC(C)C(OC(=O)C23)C(C)C)C" DOL SMILES_CANONICAL CACTVS 3.341 "CCN(CC)CC[S](=O)(=O)[C@@H]1CCN2[C@H]1C(=O)O[C@H](C(C)C)[C@H](C)/C=C/C(=O)NC/C=C/C(=C/[C@@H](O)CC(=O)Cc3occ(n3)C2=O)C" DOL SMILES CACTVS 3.341 "CCN(CC)CC[S](=O)(=O)[CH]1CCN2[CH]1C(=O)O[CH](C(C)C)[CH](C)C=CC(=O)NCC=CC(=C[CH](O)CC(=O)Cc3occ(n3)C2=O)C" DOL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCN(CC)CCS(=O)(=O)[C@@H]1CCN2[C@H]1C(=O)O[C@@H]([C@@H](\C=C\C(=O)NC/C=C/C(=C/[C@H](CC(=O)Cc3nc(co3)C2=O)O)/C)C)C(C)C" DOL SMILES "OpenEye OEToolkits" 1.5.0 "CCN(CC)CCS(=O)(=O)C1CCN2C1C(=O)OC(C(C=CC(=O)NCC=CC(=CC(CC(=O)Cc3nc(co3)C2=O)O)C)C)C(C)C" DOL InChI InChI 1.03 "InChI=1S/C34H50N4O9S/c1-7-37(8-2)16-17-48(44,45)28-13-15-38-31(28)34(43)47-32(22(3)4)24(6)11-12-29(41)35-14-9-10-23(5)18-25(39)19-26(40)20-30-36-27(21-46-30)33(38)42/h9-12,18,21-22,24-25,28,31-32,39H,7-8,13-17,19-20H2,1-6H3,(H,35,41)/b10-9+,12-11+,23-18+/t24-,25-,28-,31-,32-/m1/s1" DOL InChIKey InChI 1.03 SUYRLXYYZQTJHF-VMBLUXKRSA-N # _pdbx_chem_comp_identifier.comp_id DOL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 10.04 _pdbx_chem_comp_identifier.identifier "(3R,4R,5E,10E,12E,14S,26R,26aS)-26-{[2-(diethylamino)ethyl]sulfonyl}-14-hydroxy-4,12-dimethyl-3-(1-methylethyl)-8,9,14,15,24,25,26,26a-octahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,16,22(4H,17H)-tetrone" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DOL "Create component" 2002-09-26 RCSB DOL "Modify descriptor" 2011-06-04 RCSB DOL "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DOL _pdbx_chem_comp_synonyms.name DALFOPRISTIN _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##