data_DPR # _chem_comp.id DPR _chem_comp.name D-PROLINE _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H9 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 115.130 _chem_comp.one_letter_code P _chem_comp.three_letter_code DPR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DPR N N N 0 1 N N N Y Y N -4.206 7.451 -17.843 0.814 0.974 0.670 N DPR 1 DPR CA CA C 0 1 N N R Y N N -3.893 8.671 -18.566 -0.014 -0.244 0.598 CA DPR 2 DPR CB CB C 0 1 N N N N N N -5.242 9.255 -18.952 0.728 -1.247 -0.310 CB DPR 3 DPR CG CG C 0 1 N N N N N N -6.239 8.113 -18.840 2.199 -0.759 -0.242 CG DPR 4 DPR CD CD C 0 1 N N N N N N -5.571 6.986 -18.070 2.016 0.777 -0.168 CD DPR 5 DPR C C C 0 1 N N N Y N Y -2.999 8.379 -19.774 -1.360 0.086 0.006 C DPR 6 DPR O O O 0 1 N N N Y N Y -3.431 7.734 -20.727 -1.509 1.105 -0.626 O DPR 7 DPR OXT OXT O 0 1 N Y N Y N Y ? ? ? -2.393 -0.753 0.180 OXT DPR 8 DPR H HT1 H 0 1 N Y N Y Y N -3.576 6.736 -18.147 0.293 1.784 0.370 H DPR 9 DPR HA HA H 0 1 N N N Y N N -3.318 9.388 -17.962 -0.138 -0.667 1.595 HA DPR 10 DPR HB2 HB1 H 0 1 N N N N N N -5.517 10.078 -18.276 0.639 -2.260 0.083 HB2 DPR 11 DPR HB3 HB2 H 0 1 N N N N N N -5.215 9.648 -19.979 0.351 -1.194 -1.331 HB3 DPR 12 DPR HG2 HG1 H 0 1 N N N N N N -7.140 8.451 -18.307 2.695 -1.137 0.653 HG2 DPR 13 DPR HG3 HG2 H 0 1 N N N N N N -6.527 7.765 -19.843 2.747 -1.045 -1.140 HG3 DPR 14 DPR HD2 HD1 H 0 1 N N N N N N -5.580 6.051 -18.650 1.855 1.188 -1.165 HD2 DPR 15 DPR HD3 HD2 H 0 1 N N N N N N -6.088 6.796 -17.118 2.885 1.241 0.299 HD3 DPR 16 DPR HXT HXT H 0 1 N Y N Y N Y ? ? ? -3.237 -0.500 -0.219 HXT DPR 17 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DPR N CA SING N N 1 DPR N CD SING N N 2 DPR N H SING N N 3 DPR CA CB SING N N 4 DPR CA C SING N N 5 DPR CA HA SING N N 6 DPR CB CG SING N N 7 DPR CB HB2 SING N N 8 DPR CB HB3 SING N N 9 DPR CG CD SING N N 10 DPR CG HG2 SING N N 11 DPR CG HG3 SING N N 12 DPR CD HD2 SING N N 13 DPR CD HD3 SING N N 14 DPR C O DOUB N N 15 DPR C OXT SING N N 16 DPR OXT HXT SING N N 17 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DPR SMILES ACDLabs 12.01 "O=C(O)C1NCCC1" DPR SMILES_CANONICAL CACTVS 3.370 "OC(=O)[C@H]1CCCN1" DPR SMILES CACTVS 3.370 "OC(=O)[CH]1CCCN1" DPR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1C[C@@H](NC1)C(=O)O" DPR SMILES "OpenEye OEToolkits" 1.7.0 "C1CC(NC1)C(=O)O" DPR InChI InChI 1.03 "InChI=1S/C5H9NO2/c7-5(8)4-2-1-3-6-4/h4,6H,1-3H2,(H,7,8)/t4-/m1/s1" DPR InChIKey InChI 1.03 ONIBWKKTOPOVIA-SCSAIBSYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DPR "SYSTEMATIC NAME" ACDLabs 12.01 D-proline DPR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DPR "Create component" 1999-07-08 EBI DPR "Modify leaving atom flag" 2010-11-22 RCSB DPR "Modify descriptor" 2011-06-04 RCSB DPR "Modify backbone" 2023-11-03 PDBE #