data_DQM # _chem_comp.id DQM _chem_comp.name "(2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-3-methyl-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H26 N4 O7 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Hydrolyzed Doripenem" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-11-27 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 438.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DQM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5B15 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DQM OAX O1 O 0 1 N N N 8.891 -10.871 -7.223 5.749 -0.795 1.880 OAX DQM 1 DQM CAJ C1 C 0 1 N N N 9.199 -9.956 -6.482 6.021 -0.514 0.736 CAJ DQM 2 DQM OAD O2 O 0 1 N N N 9.972 -10.191 -5.462 7.058 -1.111 0.128 OAD DQM 3 DQM CAX C2 C 0 1 N N S 8.307 -8.733 -6.391 5.193 0.501 -0.008 CAX DQM 4 DQM CAT C3 C 0 1 N N R 7.586 -8.509 -7.739 5.686 1.909 0.331 CAT DQM 5 DQM CAA C4 C 0 1 N N N 6.283 -9.323 -7.798 7.107 2.094 -0.204 CAA DQM 6 DQM OAI O3 O 0 1 N N N 7.303 -7.126 -8.028 4.821 2.874 -0.271 OAI DQM 7 DQM CAY C5 C 0 1 N N S 9.127 -7.580 -5.789 3.726 0.361 0.402 CAY DQM 8 DQM CAU C6 C 0 1 N N R 10.336 -6.958 -6.438 2.818 1.142 -0.577 CAU DQM 9 DQM CAB C7 C 0 1 N N N 10.630 -7.587 -7.781 3.485 1.296 -1.945 CAB DQM 10 DQM NAN N1 N 0 1 N N N 8.192 -6.465 -5.514 3.295 -1.037 0.289 NAN DQM 11 DQM CAS C8 C 0 1 N N N 8.848 -5.355 -5.838 2.158 -1.154 -0.272 CAS DQM 12 DQM CAR C9 C 0 1 N N N 8.247 -4.025 -5.649 1.474 -2.447 -0.516 CAR DQM 13 DQM OAE O4 O 0 1 N N N 6.990 -3.992 -5.301 2.058 -3.600 -0.137 OAE DQM 14 DQM OAH O5 O 0 1 N N N 8.957 -3.005 -5.751 0.389 -2.467 -1.058 OAH DQM 15 DQM CAZ C10 C 0 1 N N S 10.257 -5.528 -6.352 1.594 0.196 -0.656 CAZ DQM 16 DQM SAQ S1 S 0 1 N N N 11.535 -4.659 -5.440 0.314 0.710 0.522 SAQ DQM 17 DQM CAW C11 C 0 1 N N S 11.210 -5.039 -3.731 -1.056 -0.420 0.155 CAW DQM 18 DQM CAM C12 C 0 1 N N N 11.967 -4.124 -2.782 -1.731 -0.055 -1.191 CAM DQM 19 DQM NAO N2 N 0 1 N N N 12.062 -4.881 -1.517 -3.107 -0.584 -1.079 NAO DQM 20 DQM CAV C13 C 0 1 N N S 12.122 -6.329 -1.825 -3.455 -0.687 0.350 CAV DQM 21 DQM CAK C14 C 0 1 N N N 11.564 -6.452 -3.258 -2.224 -0.221 1.156 CAK DQM 22 DQM CAL C15 C 0 1 N N N 13.577 -6.825 -1.730 -4.652 0.214 0.661 CAL DQM 23 DQM NAP N3 N 0 1 N N N 14.068 -6.949 -0.331 -5.775 -0.148 -0.208 NAP DQM 24 DQM SBA S2 S 0 1 N N N 15.054 -5.741 0.169 -7.301 0.390 0.143 SBA DQM 25 DQM OAF O6 O 0 1 N N N 16.414 -5.882 -0.299 -8.146 -0.096 -0.891 OAF DQM 26 DQM OAG O7 O 0 1 N N N 14.482 -4.471 -0.217 -7.518 0.111 1.519 OAG DQM 27 DQM NAC N4 N 0 1 N N N 15.168 -5.803 1.773 -7.285 2.040 -0.003 NAC DQM 28 DQM H1 H1 H 0 1 N N N 10.201 -11.113 -5.443 7.558 -1.758 0.645 H1 DQM 29 DQM H2 H2 H 0 1 N N N 7.522 -8.971 -5.658 5.288 0.331 -1.081 H2 DQM 30 DQM H3 H3 H 0 1 N N N 8.247 -8.899 -8.527 5.684 2.044 1.412 H3 DQM 31 DQM H4 H4 H 0 1 N N N 6.499 -10.379 -7.577 7.109 1.959 -1.286 H4 DQM 32 DQM H5 H5 H 0 1 N N N 5.572 -8.931 -7.055 7.458 3.098 0.037 H5 DQM 33 DQM H6 H6 H 0 1 N N N 5.845 -9.241 -8.804 7.767 1.358 0.255 H6 DQM 34 DQM H7 H7 H 0 1 N N N 8.108 -6.623 -7.991 3.953 2.941 0.150 H7 DQM 35 DQM H8 H8 H 0 1 N N N 9.467 -7.942 -4.807 3.582 0.720 1.421 H8 DQM 36 DQM H9 H9 H 0 1 N N N 11.182 -7.249 -5.798 2.538 2.112 -0.166 H9 DQM 37 DQM H10 H10 H 0 1 N N N 10.657 -8.682 -7.676 2.807 1.814 -2.624 H10 DQM 38 DQM H11 H11 H 0 1 N N N 9.844 -7.306 -8.497 4.403 1.874 -1.838 H11 DQM 39 DQM H12 H12 H 0 1 N N N 11.604 -7.230 -8.148 3.720 0.311 -2.348 H12 DQM 40 DQM H13 H13 H 0 1 N N N 6.727 -3.092 -5.147 1.574 -4.417 -0.317 H13 DQM 41 DQM H14 H14 H 0 1 N N N 10.299 -5.109 -7.368 1.195 0.170 -1.670 H14 DQM 42 DQM H15 H15 H 0 1 N N N 10.131 -4.882 -3.587 -0.715 -1.456 0.153 H15 DQM 43 DQM H16 H16 H 0 1 N N N 12.970 -3.902 -3.176 -1.750 1.026 -1.325 H16 DQM 44 DQM H17 H17 H 0 1 N N N 11.417 -3.184 -2.630 -1.208 -0.532 -2.020 H17 DQM 45 DQM H18 H18 H 0 1 N N N 12.888 -4.608 -1.024 -3.763 0.006 -1.569 H18 DQM 46 DQM H20 H20 H 0 1 N N N 11.488 -6.899 -1.129 -3.695 -1.721 0.600 H20 DQM 47 DQM H21 H21 H 0 1 N N N 10.665 -7.086 -3.259 -2.084 -0.843 2.040 H21 DQM 48 DQM H22 H22 H 0 1 N N N 12.323 -6.892 -3.921 -2.320 0.829 1.433 H22 DQM 49 DQM H23 H23 H 0 1 N N N 13.641 -7.812 -2.211 -4.943 0.085 1.703 H23 DQM 50 DQM H24 H24 H 0 1 N N N 14.224 -6.114 -2.265 -4.378 1.255 0.486 H24 DQM 51 DQM H25 H25 H 0 1 N N N 13.273 -6.971 0.275 -5.624 -0.703 -0.989 H25 DQM 52 DQM H26 H26 H 0 1 N N N 15.768 -5.070 2.094 -8.090 2.511 -0.269 H26 DQM 53 DQM H27 H27 H 0 1 N N N 14.260 -5.691 2.176 -6.470 2.534 0.178 H27 DQM 54 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DQM OAI CAT SING N N 1 DQM CAA CAT SING N N 2 DQM CAB CAU SING N N 3 DQM CAT CAX SING N N 4 DQM OAX CAJ DOUB N N 5 DQM CAJ CAX SING N N 6 DQM CAJ OAD SING N N 7 DQM CAU CAZ SING N N 8 DQM CAU CAY SING N N 9 DQM CAX CAY SING N N 10 DQM CAZ CAS SING N N 11 DQM CAZ SAQ SING N N 12 DQM CAS CAR SING N N 13 DQM CAS NAN DOUB N N 14 DQM CAY NAN SING N N 15 DQM OAH CAR DOUB N N 16 DQM CAR OAE SING N N 17 DQM SAQ CAW SING N N 18 DQM CAW CAK SING N N 19 DQM CAW CAM SING N N 20 DQM CAK CAV SING N N 21 DQM CAM NAO SING N N 22 DQM CAV CAL SING N N 23 DQM CAV NAO SING N N 24 DQM CAL NAP SING N N 25 DQM NAP SBA SING N N 26 DQM OAF SBA DOUB N N 27 DQM OAG SBA DOUB N N 28 DQM SBA NAC SING N N 29 DQM OAD H1 SING N N 30 DQM CAX H2 SING N N 31 DQM CAT H3 SING N N 32 DQM CAA H4 SING N N 33 DQM CAA H5 SING N N 34 DQM CAA H6 SING N N 35 DQM OAI H7 SING N N 36 DQM CAY H8 SING N N 37 DQM CAU H9 SING N N 38 DQM CAB H10 SING N N 39 DQM CAB H11 SING N N 40 DQM CAB H12 SING N N 41 DQM OAE H13 SING N N 42 DQM CAZ H14 SING N N 43 DQM CAW H15 SING N N 44 DQM CAM H16 SING N N 45 DQM CAM H17 SING N N 46 DQM NAO H18 SING N N 47 DQM CAV H20 SING N N 48 DQM CAK H21 SING N N 49 DQM CAK H22 SING N N 50 DQM CAL H23 SING N N 51 DQM CAL H24 SING N N 52 DQM NAP H25 SING N N 53 DQM NAC H26 SING N N 54 DQM NAC H27 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DQM InChI InChI 1.03 "InChI=1S/C15H26N4O7S2/c1-6-11(10(7(2)20)14(21)22)19-12(15(23)24)13(6)27-9-3-8(17-5-9)4-18-28(16,25)26/h6-11,13,17-18,20H,3-5H2,1-2H3,(H,21,22)(H,23,24)(H2,16,25,26)/t6-,7-,8+,9+,10-,11-,13+/m1/s1" DQM InChIKey InChI 1.03 FODJFDYENOTZNC-UNWFBNKDSA-N DQM SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H]([C@@H]1N=C([C@@H](S[C@@H]2CN[C@H](CN[S](N)(=O)=O)C2)[C@@H]1C)C(O)=O)C(O)=O" DQM SMILES CACTVS 3.385 "C[CH](O)[CH]([CH]1N=C([CH](S[CH]2CN[CH](CN[S](N)(=O)=O)C2)[CH]1C)C(O)=O)C(O)=O" DQM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@H]1[C@@H](C(=N[C@H]1[C@@H]([C@@H](C)O)C(=O)O)C(=O)O)S[C@H]2C[C@H](NC2)CNS(=O)(=O)N" DQM SMILES "OpenEye OEToolkits" 2.0.4 "CC1C(C(=NC1C(C(C)O)C(=O)O)C(=O)O)SC2CC(NC2)CNS(=O)(=O)N" # _pdbx_chem_comp_identifier.comp_id DQM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.4 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-3-methyl-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DQM "Create component" 2015-11-27 PDBJ DQM "Initial release" 2016-05-11 RCSB DQM "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DQM _pdbx_chem_comp_synonyms.name "Hydrolyzed Doripenem" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##