data_DTA # _chem_comp.id DTA _chem_comp.name "(2S,3S,4R,5R,2'S,3'S,4'R,5'R)-2,2'-[DITHIOBIS(METHYLENE)]BIS[5-(6-AMINO-9H-PURIN-9-YL)TETRAHYDROFURAN-3,4-DIOL]" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 N10 O6 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "DI-(5'-THIOADENOSINE)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-08-17 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 564.598 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DTA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DTA N62 N62 N 0 1 N N N 18.559 3.094 6.706 6.466 -2.817 -7.557 N62 DTA 1 DTA C62 C62 C 0 1 Y N N 18.724 4.250 7.366 6.991 -3.411 -6.396 C62 DTA 2 DTA N12 N12 N 0 1 Y N N 19.929 4.553 7.872 7.442 -4.688 -6.428 N12 DTA 3 DTA C22 C22 C 0 1 Y N N 20.159 5.671 8.541 7.936 -5.206 -5.277 C22 DTA 4 DTA N32 N32 N 0 1 Y N N 19.198 6.559 8.738 8.050 -4.621 -4.065 N32 DTA 5 DTA C42 C42 C 0 1 Y N N 17.958 6.319 8.260 7.587 -3.362 -4.106 C42 DTA 6 DTA C52 C52 C 0 1 Y N N 17.679 5.159 7.557 7.056 -2.700 -5.202 C52 DTA 7 DTA N72 N72 N 0 1 Y N N 16.388 5.202 7.217 6.687 -1.422 -4.864 N72 DTA 8 DTA C82 C82 C 0 1 Y N N 15.874 6.350 7.683 6.989 -1.309 -3.588 C82 DTA 9 DTA N92 N92 N 0 1 Y N N 16.839 7.031 8.319 7.537 -2.459 -3.082 N92 DTA 10 DTA "C1'" C1* C 0 1 N N R 16.751 8.349 9.005 7.981 -2.669 -1.702 "C1'" DTA 11 DTA "O4'" O4* O 0 1 N N N 15.552 8.444 9.809 7.125 -1.932 -0.804 "O4'" DTA 12 DTA "C2'" C2* C 0 1 N N R 16.651 9.464 7.955 9.420 -2.217 -1.446 "C2'" DTA 13 DTA "O2'" O2* O 0 1 N N N 17.833 10.271 8.007 10.075 -3.179 -0.621 "O2'" DTA 14 DTA "C3'" C3* C 0 1 N N S 15.419 10.264 8.407 9.234 -0.902 -0.713 "C3'" DTA 15 DTA "O3'" O3* O 0 1 N N N 15.647 11.668 8.327 10.316 -0.570 0.131 "O3'" DTA 16 DTA "C4'" C4* C 0 1 N N R 15.243 9.836 9.863 7.954 -1.145 0.067 "C4'" DTA 17 DTA "C5'" C5* C 0 1 N N N 13.778 10.034 10.267 7.228 0.131 0.454 "C5'" DTA 18 DTA "S5'" S5* S 0 1 N N N 13.307 9.307 11.885 5.724 -0.255 1.387 "S5'" DTA 19 DTA S5R S5R S 0 1 N N N 14.920 9.549 13.121 4.974 1.622 1.762 S5R DTA 20 DTA C5R C5R C 0 1 N N N 15.454 7.838 13.540 3.918 1.891 0.317 C5R DTA 21 DTA C4R C4R C 0 1 N N R 16.975 7.671 13.825 3.250 3.252 0.392 C4R DTA 22 DTA O4R O4R O 0 1 N N N 17.744 8.572 12.974 4.247 4.287 0.364 O4R DTA 23 DTA C3R C3R C 0 1 N N S 17.348 8.026 15.275 2.338 3.545 -0.788 C3R DTA 24 DTA O3R O3R O 0 1 N N N 18.281 7.058 15.788 1.071 2.941 -0.643 O3R DTA 25 DTA C2R C2R C 0 1 N N R 18.006 9.400 15.154 2.289 5.061 -0.788 C2R DTA 26 DTA O2R O2R O 0 1 N N N 18.974 9.618 16.194 1.306 5.546 0.125 O2R DTA 27 DTA C1R C1R C 0 1 N N R 18.706 9.261 13.815 3.680 5.447 -0.282 C1R DTA 28 DTA N91 N91 N 0 1 Y N N 19.023 10.576 13.193 4.582 5.906 -1.339 N91 DTA 29 DTA C81 C81 C 0 1 Y N N 18.155 11.526 12.828 4.785 7.207 -1.720 C81 DTA 30 DTA N71 N71 N 0 1 Y N N 18.819 12.557 12.305 5.657 7.309 -2.701 N71 DTA 31 DTA C51 C51 C 0 1 Y N N 20.116 12.254 12.324 6.036 6.017 -2.970 C51 DTA 32 DTA C41 C41 C 0 1 Y N N 20.245 10.991 12.888 5.379 5.129 -2.134 C41 DTA 33 DTA N31 N31 N 0 1 Y N N 21.465 10.438 13.038 5.501 3.794 -2.111 N31 DTA 34 DTA C21 C21 C 0 1 Y N N 22.548 11.094 12.640 6.386 3.385 -3.046 C21 DTA 35 DTA N11 N11 N 0 1 Y N N 22.462 12.304 12.096 7.097 4.130 -3.926 N11 DTA 36 DTA C61 C61 C 0 1 Y N N 21.276 12.914 11.914 6.923 5.473 -3.893 C61 DTA 37 DTA N61 N61 N 0 1 N N N 21.218 14.127 11.362 7.633 6.300 -4.781 N61 DTA 38 DTA H621 1H62 H 0 0 N N N 18.518 3.274 5.723 6.107 -1.882 -7.513 H621 DTA 39 DTA H622 2H62 H 0 0 N N N 19.328 2.486 6.902 6.371 -3.365 -8.390 H622 DTA 40 DTA H22 H22 H 0 1 N N N 21.147 5.862 8.933 8.287 -6.230 -5.339 H22 DTA 41 DTA H82 H82 H 0 1 N N N 14.850 6.673 7.565 6.835 -0.428 -2.980 H82 DTA 42 DTA "H1'" H1* H 0 1 N N N 17.646 8.449 9.637 7.837 -3.738 -1.515 "H1'" DTA 43 DTA "H2'" H2* H 0 1 N N N 16.560 9.100 6.921 10.022 -2.112 -2.353 "H2'" DTA 44 DTA "HO2'" HO2* H 0 0 N N N 18.134 10.450 7.124 9.987 -4.044 -1.060 "HO2'" DTA 45 DTA "H3'" H3* H 0 1 N N N 14.537 10.071 7.779 9.087 -0.094 -1.440 "H3'" DTA 46 DTA "HO3'" HO3* H 0 0 N N N 15.698 12.031 9.203 9.942 -0.066 0.869 "HO3'" DTA 47 DTA "H4'" H4* H 0 1 N N N 15.860 10.396 10.582 8.147 -1.728 0.976 "H4'" DTA 48 DTA "H5'1" 1H5* H 0 0 N N N 13.592 11.117 10.322 6.956 0.692 -0.443 "H5'1" DTA 49 DTA "H5'2" 2H5* H 0 0 N N N 13.176 9.513 9.508 7.877 0.758 1.069 "H5'2" DTA 50 DTA H5R1 1H5R H 0 0 N N N 14.910 7.532 14.446 4.532 1.820 -0.586 H5R1 DTA 51 DTA H5R2 2H5R H 0 0 N N N 15.236 7.221 12.656 3.164 1.100 0.279 H5R2 DTA 52 DTA H4R H4R H 0 1 N N N 17.205 6.613 13.630 2.706 3.324 1.342 H4R DTA 53 DTA H3R H3R H 0 1 N N N 16.487 8.030 15.960 2.798 3.193 -1.719 H3R DTA 54 DTA HO3R HO3R H 0 0 N N N 18.487 6.425 15.110 0.792 2.675 -1.532 HO3R DTA 55 DTA H2R H2R H 0 1 N N N 17.301 10.240 15.234 2.042 5.474 -1.771 H2R DTA 56 DTA HO2R HO2R H 0 0 N N N 19.843 9.666 15.813 0.488 5.044 -0.038 HO2R DTA 57 DTA H1R H1R H 0 1 N N N 19.664 8.735 13.936 3.651 6.265 0.445 H1R DTA 58 DTA H81 H81 H 0 1 N N N 17.082 11.467 12.940 4.272 8.033 -1.246 H81 DTA 59 DTA H21 H21 H 0 1 N N N 23.518 10.636 12.760 6.549 2.314 -3.101 H21 DTA 60 DTA H611 1H61 H 0 0 N N N 21.203 14.821 12.082 8.199 7.043 -4.417 H611 DTA 61 DTA H612 2H61 H 0 0 N N N 22.019 14.267 10.780 7.491 6.199 -5.768 H612 DTA 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DTA N62 C62 SING N N 1 DTA N62 H621 SING N N 2 DTA N62 H622 SING N N 3 DTA C62 C52 DOUB Y N 4 DTA C62 N12 SING Y N 5 DTA N12 C22 DOUB Y N 6 DTA C22 N32 SING Y N 7 DTA C22 H22 SING N N 8 DTA N32 C42 DOUB Y N 9 DTA C42 C52 SING Y N 10 DTA C42 N92 SING Y N 11 DTA C52 N72 SING Y N 12 DTA N72 C82 DOUB Y N 13 DTA C82 N92 SING Y N 14 DTA C82 H82 SING N N 15 DTA N92 "C1'" SING N N 16 DTA "C1'" "C2'" SING N N 17 DTA "C1'" "O4'" SING N N 18 DTA "C1'" "H1'" SING N N 19 DTA "O4'" "C4'" SING N N 20 DTA "C2'" "O2'" SING N N 21 DTA "C2'" "C3'" SING N N 22 DTA "C2'" "H2'" SING N N 23 DTA "O2'" "HO2'" SING N N 24 DTA "C3'" "O3'" SING N N 25 DTA "C3'" "C4'" SING N N 26 DTA "C3'" "H3'" SING N N 27 DTA "O3'" "HO3'" SING N N 28 DTA "C4'" "C5'" SING N N 29 DTA "C4'" "H4'" SING N N 30 DTA "C5'" "S5'" SING N N 31 DTA "C5'" "H5'1" SING N N 32 DTA "C5'" "H5'2" SING N N 33 DTA "S5'" S5R SING N N 34 DTA S5R C5R SING N N 35 DTA C5R C4R SING N N 36 DTA C5R H5R1 SING N N 37 DTA C5R H5R2 SING N N 38 DTA C4R O4R SING N N 39 DTA C4R C3R SING N N 40 DTA C4R H4R SING N N 41 DTA O4R C1R SING N N 42 DTA C3R C2R SING N N 43 DTA C3R O3R SING N N 44 DTA C3R H3R SING N N 45 DTA O3R HO3R SING N N 46 DTA C2R C1R SING N N 47 DTA C2R O2R SING N N 48 DTA C2R H2R SING N N 49 DTA O2R HO2R SING N N 50 DTA C1R N91 SING N N 51 DTA C1R H1R SING N N 52 DTA N91 C81 SING Y N 53 DTA N91 C41 SING Y N 54 DTA C81 N71 DOUB Y N 55 DTA C81 H81 SING N N 56 DTA N71 C51 SING Y N 57 DTA C51 C61 SING Y N 58 DTA C51 C41 DOUB Y N 59 DTA C41 N31 SING Y N 60 DTA N31 C21 DOUB Y N 61 DTA C21 N11 SING Y N 62 DTA C21 H21 SING N N 63 DTA N11 C61 DOUB Y N 64 DTA C61 N61 SING N N 65 DTA N61 H611 SING N N 66 DTA N61 H612 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DTA SMILES ACDLabs 10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CSSCC6OC(n4c5ncnc(N)c5nc4)C(O)C6O)N" DTA SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CSSC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)[C@@H](O)[C@H]3O" DTA SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CSSC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)[CH](O)[CH]3O" DTA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSSC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)N" DTA SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSSCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)N" DTA InChI InChI 1.03 "InChI=1S/C20H24N10O6S2/c21-15-9-17(25-3-23-15)29(5-27-9)19-13(33)11(31)7(35-19)1-37-38-2-8-12(32)14(34)20(36-8)30-6-28-10-16(22)24-4-26-18(10)30/h3-8,11-14,19-20,31-34H,1-2H2,(H2,21,23,25)(H2,22,24,26)/t7-,8-,11-,12-,13-,14-,19-,20-/m1/s1" DTA InChIKey InChI 1.03 HYGRWPFOTXXMNB-XPWFQUROSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DTA "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,3S,4R,5R,2'S,3'S,4'R,5'R)-2,2'-(disulfanediyldimethanediyl)bis[5-(6-amino-9H-purin-9-yl)tetrahydrofuran-3,4-diol] (non-preferred name)" DTA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5S)-2-(6-aminopurin-9-yl)-5-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyldisulfanylmethyl]oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DTA "Create component" 2006-08-17 RCSB DTA "Modify descriptor" 2011-06-04 RCSB DTA "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DTA _pdbx_chem_comp_synonyms.name "DI-(5'-THIOADENOSINE)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##