2',5'-dideoxy-5'-(tritylamino)uridine
non-polymer
HETAIN
C28 H27 N3 O4
0
2011-08-18
2012-08-24
N
REL
469.532
DUA
N
Corina
N
3T60
RCSB
N1
N
0
1
N
N
N
17.726
22.088
-0.378
4.246
0.207
0.413
N1
DUA
1
O1
O
0
1
N
N
N
16.724
17.786
0.876
1.219
3.849
-0.103
O1
DUA
2
C2
C
0
1
N
N
N
18.596
23.039
-0.858
5.299
-0.163
1.164
C2
DUA
3
N2
N
0
1
N
N
N
18.688
18.471
-3.231
-1.058
0.141
0.777
N2
DUA
4
O2
O
0
1
N
N
N
19.814
22.848
-0.725
5.370
0.206
2.320
O2
DUA
5
N3
N
0
1
N
N
N
18.070
24.132
-1.364
6.275
-0.937
0.654
N3
DUA
6
C4
C
0
1
N
N
N
16.725
24.231
-1.486
6.211
-1.355
-0.626
C4
DUA
7
O4
O
0
1
N
N
N
16.180
25.232
-2.018
7.093
-2.056
-1.089
O4
DUA
8
C5
C
0
1
N
N
N
15.862
23.265
-1.026
5.108
-0.973
-1.428
C5
DUA
9
C6
C
0
1
N
N
N
16.396
22.153
-0.497
4.141
-0.201
-0.889
C6
DUA
10
C1'
C
0
1
N
N
R
18.193
20.831
0.104
3.199
1.050
0.996
C1'
DUA
11
C17
C
0
1
N
N
N
18.203
18.739
-4.593
-2.338
-0.240
0.167
C17
DUA
12
C18
C
0
1
Y
N
N
19.577
18.503
-5.351
-3.195
0.987
-0.010
C18
DUA
13
C19
C
0
1
Y
N
N
20.459
17.416
-5.051
-2.982
2.099
0.782
C19
DUA
14
C2'
C
0
1
N
N
N
17.763
20.035
1.284
3.174
2.419
0.289
C2'
DUA
15
C20
C
0
1
Y
N
N
21.695
17.111
-5.695
-3.768
3.224
0.620
C20
DUA
16
C21
C
0
1
Y
N
N
22.149
17.918
-6.728
-4.768
3.237
-0.335
C21
DUA
17
C22
C
0
1
Y
N
N
21.303
18.965
-7.085
-4.982
2.124
-1.127
C22
DUA
18
C23
C
0
1
Y
N
N
20.056
19.240
-6.447
-4.191
1.001
-0.969
C23
DUA
19
C24
C
0
1
Y
N
N
17.866
20.188
-4.732
-2.086
-0.875
-1.176
C24
DUA
20
C25
C
0
1
Y
N
N
16.637
20.576
-5.312
-1.932
-0.081
-2.298
C25
DUA
21
C26
C
0
1
Y
N
N
16.191
21.906
-5.438
-1.700
-0.663
-3.530
C26
DUA
22
C27
C
0
1
Y
N
N
17.000
22.916
-4.930
-1.622
-2.039
-3.641
C27
DUA
23
C28
C
0
1
Y
N
N
18.216
22.551
-4.328
-1.776
-2.832
-2.519
C28
DUA
24
C29
C
0
1
Y
N
N
18.641
21.201
-4.195
-2.002
-2.250
-1.286
C29
DUA
25
C3'
C
0
1
N
N
S
17.113
19.024
0.305
1.736
2.528
-0.275
C3'
DUA
26
C30
C
0
1
Y
N
N
17.427
17.748
-5.447
-3.048
-1.224
1.062
C30
DUA
27
C31
C
0
1
Y
N
N
16.745
16.714
-4.804
-2.339
-1.918
2.024
C31
DUA
28
C32
C
0
1
Y
N
N
15.965
15.830
-5.525
-2.990
-2.821
2.844
C32
DUA
29
C33
C
0
1
Y
N
N
15.835
16.005
-6.911
-4.350
-3.029
2.702
C33
DUA
30
C34
C
0
1
Y
N
N
16.469
17.039
-7.608
-5.058
-2.334
1.740
C34
DUA
31
C35
C
0
1
Y
N
N
17.243
17.893
-6.848
-4.408
-1.427
0.923
C35
DUA
32
C4'
C
0
1
N
N
R
18.148
18.747
-0.788
0.964
1.513
0.606
C4'
DUA
33
O4'
O
0
1
N
N
N
18.930
19.927
-0.754
1.913
0.441
0.795
O4'
DUA
34
C5'
C
0
1
N
N
N
17.641
18.466
-2.165
-0.283
1.006
-0.122
C5'
DUA
35
HO1
H
0
1
N
N
N
16.338
17.235
0.205
1.725
4.532
-0.563
HO1
DUA
36
HN2
H
0
1
N
N
N
19.116
17.567
-3.236
-1.201
0.585
1.672
HN2
DUA
37
H5
H
0
1
N
N
N
14.792
23.396
-1.088
5.040
-1.299
-2.455
H5
DUA
38
H6
H
0
1
N
N
N
15.769
21.334
-0.177
3.292
0.100
-1.485
H6
DUA
39
H1'
H
0
1
N
N
N
18.555
21.762
0.564
3.384
1.187
2.062
H1'
DUA
40
H19
H
0
1
N
N
N
20.156
16.756
-4.251
-2.201
2.089
1.528
H19
DUA
41
H2'
H
0
1
N
N
N
18.551
19.656
1.951
3.366
3.220
1.002
H2'
DUA
42
H2'A
H
0
0
N
N
N
17.102
20.529
2.011
3.905
2.444
-0.519
H2'A
DUA
43
H20
H
0
1
N
N
N
22.274
16.256
-5.380
-3.602
4.093
1.239
H20
DUA
44
H21
H
0
1
N
N
N
23.094
17.746
-7.222
-5.383
4.116
-0.461
H21
DUA
45
H22
H
0
1
N
N
N
21.610
19.609
-7.896
-5.763
2.134
-1.872
H22
DUA
46
H23
H
0
1
N
N
N
19.453
20.052
-6.824
-4.358
0.132
-1.588
H23
DUA
47
H25
H
0
1
N
N
N
15.992
19.795
-5.686
-1.993
0.994
-2.211
H25
DUA
48
H26
H
0
1
N
N
N
15.249
22.134
-5.915
-1.581
-0.043
-4.406
H26
DUA
49
H27
H
0
1
N
N
N
16.702
23.952
-4.996
-1.442
-2.494
-4.604
H27
DUA
50
H28
H
0
1
N
N
N
18.858
23.333
-3.949
-1.715
-3.907
-2.606
H28
DUA
51
H29
H
0
1
N
N
N
19.561
20.968
-3.679
-2.118
-2.870
-0.410
H29
DUA
52
H3'
H
0
1
N
N
N
16.181
19.480
-0.059
1.706
2.234
-1.324
H3'
DUA
53
H31
H
0
1
N
N
N
16.828
16.604
-3.733
-1.278
-1.756
2.135
H31
DUA
54
H32
H
0
1
N
N
N
15.462
15.014
-5.028
-2.437
-3.364
3.596
H32
DUA
55
H33
H
0
1
N
N
N
15.219
15.311
-7.464
-4.858
-3.734
3.343
H33
DUA
56
H34
H
0
1
N
N
N
16.360
17.162
-8.675
-6.120
-2.497
1.628
H34
DUA
57
H35
H
0
1
N
N
N
17.735
18.716
-7.345
-4.962
-0.884
0.171
H35
DUA
58
H4'
H
0
1
N
N
N
18.676
17.805
-0.579
0.695
1.961
1.562
H4'
DUA
59
H5'
H
0
1
N
N
N
16.904
19.243
-2.416
0.016
0.439
-1.004
H5'
DUA
60
H5'A
H
0
0
N
N
N
17.178
17.468
-2.155
-0.895
1.855
-0.427
H5'A
DUA
61
HN3
H
0
1
N
N
N
18.659
24.885
-1.657
7.027
-1.195
1.209
HN3
DUA
62
sing
N
N
1
sing
N
N
2
sing
N
N
3
sing
N
N
4
sing
N
N
5
sing
N
N
6
doub
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
doub
N
N
12
sing
N
N
13
doub
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
doub
Y
N
23
sing
Y
N
24
doub
Y
N
25
sing
N
N
26
sing
N
N
27
sing
N
N
28
sing
N
N
29
sing
Y
N
30
sing
N
N
31
doub
Y
N
32
sing
N
N
33
sing
Y
N
34
sing
N
N
35
sing
N
N
36
doub
Y
N
37
sing
Y
N
38
sing
Y
N
39
sing
N
N
40
doub
Y
N
41
sing
N
N
42
sing
Y
N
43
sing
N
N
44
doub
Y
N
45
sing
N
N
46
sing
N
N
47
sing
N
N
48
sing
N
N
49
doub
Y
N
50
sing
Y
N
51
doub
Y
N
52
sing
N
N
53
sing
Y
N
54
sing
N
N
55
doub
Y
N
56
sing
N
N
57
sing
Y
N
58
sing
N
N
59
sing
N
N
60
sing
N
N
61
sing
N
N
62
sing
N
N
63
sing
N
N
64
sing
N
N
65
sing
N
N
66
O=C1NC(=O)N(C=C1)C2OC(C(O)C2)CNC(c3ccccc3)(c4ccccc4)c5ccccc5
InChI=1S/C28H27N3O4/c32-23-18-26(31-17-16-25(33)30-27(31)34)35-24(23)19-29-28(20-10-4-1-5-11-20,21-12-6-2-7-13-21)22-14-8-3-9-15-22/h1-17,23-24,26,29,32H,18-19H2,(H,30,33,34)/t23-,24+,26+/m0/s1
TUZNCXRMWDUVNX-BFLUCZKCSA-N
O[C@H]1C[C@@H](O[C@@H]1CNC(c2ccccc2)(c3ccccc3)c4ccccc4)N5C=CC(=O)NC5=O
O[CH]1C[CH](O[CH]1CNC(c2ccccc2)(c3ccccc3)c4ccccc4)N5C=CC(=O)NC5=O
c1ccc(cc1)C(c2ccccc2)(c3ccccc3)NC[C@@H]4[C@H](C[C@@H](O4)N5C=CC(=O)NC5=O)O
c1ccc(cc1)C(c2ccccc2)(c3ccccc3)NCC4C(CC(O4)N5C=CC(=O)NC5=O)O
2',5'-dideoxy-5'-(tritylamino)uridine
1-[(2R,4S,5R)-4-oxidanyl-5-[[(triphenylmethyl)amino]methyl]oxolan-2-yl]pyrimidine-2,4-dione
RCSB
RCSB