2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
non-polymer
HETAIN
C9 H16 N3 O13 P3
0
2003-12-17
2011-06-04
N
REL
467.157
DUP
N
N
1RN8
RCSB
O4
O
0
1
N
N
N
-4.608
33.070
2.415
-2.207
-0.898
8.166
O4
DUP
1
C4
C
0
1
Y
N
N
-5.557
32.595
3.067
-1.444
-0.540
7.287
C4
DUP
2
C5
C
0
1
Y
N
N
-6.573
33.399
3.592
-0.684
0.644
7.441
C5
DUP
3
C6
C
0
1
Y
N
N
-7.586
32.789
4.301
0.154
1.019
6.451
C6
DUP
4
N3
N
0
1
Y
N
N
-5.596
31.268
3.283
-1.314
-1.267
6.160
N3
DUP
5
C2
C
0
1
Y
N
N
-6.575
30.671
3.981
-0.474
-0.867
5.187
C2
DUP
6
O2
O
0
1
N
N
N
-6.536
29.438
4.169
-0.368
-1.534
4.175
O2
DUP
7
N1
N
0
1
Y
N
N
-7.610
31.446
4.498
0.256
0.253
5.322
N1
DUP
8
C1*
C
0
1
N
N
R
-8.677
30.796
5.271
1.166
0.660
4.249
C1'
DUP
9
C2*
C
0
1
N
N
N
-8.503
31.067
6.753
2.229
-0.432
4.002
C2'
DUP
10
C3*
C
0
1
N
N
S
-9.491
32.167
7.069
2.432
-0.420
2.470
C3'
DUP
11
O3*
O
0
1
N
N
N
-9.921
32.128
8.439
3.782
-0.084
2.146
O3'
DUP
12
O4*
O
0
1
N
N
N
-9.921
31.364
4.899
0.453
0.771
2.998
O4'
DUP
13
C4*
C
0
1
N
N
R
-10.597
31.928
6.041
1.466
0.677
1.969
C4'
DUP
14
C5*
C
0
1
N
N
N
-11.423
33.160
5.672
0.835
0.273
0.635
C5'
DUP
15
O5*
O
0
1
N
N
N
-10.593
34.233
5.217
-0.105
1.270
0.232
O5'
DUP
16
PA
P
0
1
N
N
S
-11.226
35.542
4.503
-0.727
0.783
-1.170
PA
DUP
17
O1A
O
0
1
N
N
N
-12.301
36.064
5.415
-1.394
-0.525
-0.986
O1A
DUP
18
O2A
O
0
1
N
N
N
-10.043
36.415
4.161
-1.802
1.865
-1.685
O2A
DUP
19
N3A
N
0
1
N
N
N
-11.874
34.943
3.064
0.504
0.630
-2.306
N3A
DUP
20
PB
P
0
1
N
N
R
-13.457
35.135
2.564
-0.219
0.121
-3.738
PB
DUP
21
O1B
O
0
1
N
N
N
-14.032
36.396
3.198
-0.893
-1.177
-3.515
O1B
DUP
22
O2B
O
0
1
N
N
N
-13.443
35.114
1.080
-1.302
1.214
-4.210
O2B
DUP
23
O3B
O
0
1
N
N
N
-14.204
33.801
3.087
0.905
-0.046
-4.877
O3B
DUP
24
PG
P
0
1
N
N
N
-15.321
33.739
4.265
0.147
-0.533
-6.212
PG
DUP
25
O2G
O
0
1
N
N
N
-15.085
34.759
5.355
-0.854
0.481
-6.608
O2G
DUP
26
O1G
O
0
1
N
N
N
-16.672
33.993
3.614
1.218
-0.722
-7.399
O1G
DUP
27
O3G
O
0
1
N
N
N
-15.188
32.344
4.831
-0.592
-1.934
-5.928
O3G
DUP
28
H5
H
0
1
N
N
N
-6.575
34.492
3.449
-0.774
1.240
8.337
H5
DUP
29
H6
H
0
1
N
N
N
-8.404
33.395
4.724
0.742
1.920
6.551
H6
DUP
30
HN3
H
0
1
N
N
N
-4.849
30.688
2.900
-1.831
-2.080
6.047
HN3
DUP
31
H1*
H
0
1
N
N
N
-8.637
29.700
5.068
1.645
1.607
4.497
H1'
DUP
32
1H2*
H
0
0
N
N
N
-8.615
30.161
7.393
1.862
-1.404
4.330
H2'1
DUP
33
2H2*
H
0
0
N
N
N
-7.454
31.303
7.048
3.160
-0.182
4.512
H2'2
DUP
34
H1
H
0
1
N
N
N
-9.073
33.197
6.987
2.166
-1.386
2.042
H1
DUP
35
H3*
H
0
1
N
N
N
-10.541
32.819
8.637
4.339
-0.786
2.508
H3'
DUP
36
H4*
H
0
1
N
N
N
-11.371
31.249
6.469
1.992
1.626
1.867
H4'
DUP
37
1H5*
H
0
0
N
N
N
-12.213
32.911
4.925
1.614
0.181
-0.121
H5'1
DUP
38
2H5*
H
0
0
N
N
N
-12.076
33.480
6.516
0.325
-0.683
0.749
H5'2
DUP
39
H2A
H
0
1
N
N
N
-10.414
37.182
3.742
-1.328
2.701
-1.791
H2A
DUP
40
H3A
H
0
1
N
N
N
-11.684
33.940
3.053
0.859
1.559
-2.475
H3A
DUP
41
H2B
H
0
1
N
N
N
-14.342
35.223
0.795
-0.822
2.043
-4.344
H2B
DUP
42
H1G
H
0
1
N
N
N
-17.325
33.956
4.302
0.723
-1.013
-8.177
H1G
DUP
43
H3G
H
0
1
N
N
N
-15.841
32.307
5.519
0.093
-2.566
-5.673
H3G
DUP
44
doub
N
N
1
sing
Y
N
2
sing
Y
N
3
doub
Y
N
4
sing
N
N
5
sing
Y
N
6
sing
N
N
7
sing
Y
N
8
sing
N
N
9
doub
N
N
10
sing
Y
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
sing
N
N
25
sing
N
N
26
sing
N
N
27
sing
N
N
28
sing
N
N
29
doub
N
N
30
sing
N
N
31
sing
N
N
32
sing
N
N
33
sing
N
N
34
sing
N
N
35
doub
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
sing
N
N
40
doub
N
N
41
sing
N
N
42
sing
N
N
43
sing
N
N
44
sing
N
N
45
O=P(O)(O)OP(=O)(O)NP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)CC2O
O[C@H]1C[C@@H](O[C@@H]1CO[P@](O)(=O)N[P@](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
O[CH]1C[CH](O[CH]1CO[P](O)(=O)N[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
C1[C@@H]([C@H](O[C@H]1N2C=CC(=O)NC2=O)CO[P@](=O)(N[P@@](=O)(O)OP(=O)(O)O)O)O
C1C(C(OC1N2C=CC(=O)NC2=O)COP(=O)(NP(=O)(O)OP(=O)(O)O)O)O
InChI=1S/C9H16N3O13P3/c13-5-3-8(12-2-1-7(14)10-9(12)15)24-6(5)4-23-26(16,17)11-27(18,19)25-28(20,21)22/h1-2,5-6,8,13H,3-4H2,(H,10,14,15)(H2,20,21,22)(H3,11,16,17,18,19)/t5-,6+,8+/m0/s1
XZLLMTSKYYYJLH-SHYZEUOFSA-N
2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine
[(2R,3S,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methoxy-N-(hydroxy-phosphonooxy-phosphoryl)phosphonamidic acid
RCSB
RCSB