DEOXYURIDINE-5'-TRIPHOSPHATE
non-polymer
HETAIN
C9 H15 N2 O14 P3
0
2000-05-11
2011-06-04
N
REL
468.142
DUT
N
N
1EXC
RCSB
N1
N
0
1
N
N
N
10.615
-3.547
28.981
-0.317
0.514
5.166
N1
DUT
1
C2
C
0
1
N
N
N
10.825
-3.972
30.287
-0.972
-0.648
4.995
C2
DUT
2
N3
N
0
1
N
N
N
11.841
-4.875
30.442
-2.078
-0.930
5.708
N3
DUT
3
C4
C
0
1
N
N
N
12.650
-5.394
29.456
-2.554
-0.042
6.604
C4
DUT
4
C5
C
0
1
N
N
N
12.368
-4.918
28.136
-1.877
1.187
6.790
C5
DUT
5
C6
C
0
1
N
N
N
11.385
-4.032
27.948
-0.767
1.442
6.065
C6
DUT
6
O2
O
0
1
N
N
N
10.160
-3.581
31.232
-0.554
-1.459
4.191
O2
DUT
7
O4
O
0
1
N
N
N
13.530
-6.199
29.762
-3.558
-0.294
7.246
O4
DUT
8
C1*
C
0
1
N
N
R
9.550
-2.561
28.740
0.886
0.791
4.379
C1'
DUT
9
C2*
C
0
1
N
N
N
10.048
-1.179
28.323
1.969
-0.274
4.659
C2'
DUT
10
C3*
C
0
1
N
N
S
9.892
-1.194
26.814
2.645
-0.492
3.287
C3'
DUT
11
C4*
C
0
1
N
N
R
8.668
-2.079
26.611
1.891
0.464
2.337
C4'
DUT
12
O4*
O
0
1
N
N
N
8.729
-3.048
27.680
0.606
0.669
2.967
O4'
DUT
13
O3*
O
0
1
N
N
N
9.673
0.107
26.251
4.030
-0.147
3.350
O3'
DUT
14
C5*
C
0
1
N
N
N
8.628
-2.791
25.280
1.713
-0.173
0.958
C5'
DUT
15
O5*
O
0
1
N
N
N
7.282
-2.797
24.753
0.951
0.701
0.123
O5'
DUT
16
PA
P
0
1
N
N
R
6.061
-3.523
25.555
0.802
-0.028
-1.303
PA
DUT
17
O1A
O
0
1
N
N
N
6.373
-4.976
25.612
2.145
-0.265
-1.878
O1A
DUT
18
O2A
O
0
1
N
N
N
5.836
-2.745
26.802
0.046
-1.436
-1.109
O2A
DUT
19
O3A
O
0
1
N
N
N
4.724
-3.363
24.634
-0.049
0.906
-2.298
O3A
DUT
20
PB
P
0
1
N
N
R
4.470
-3.576
23.039
-0.158
0.118
-3.698
PB
DUT
21
O1B
O
0
1
N
N
N
5.128
-2.445
22.338
-0.839
-1.177
-3.483
O1B
DUT
22
O2B
O
0
1
N
N
N
3.028
-3.856
22.834
1.318
-0.141
-4.283
O2B
DUT
23
O3B
O
0
1
N
N
N
5.269
-4.930
22.629
-1.003
1.001
-4.746
O3B
DUT
24
PG
P
0
1
N
N
N
5.894
-5.447
21.219
-1.071
0.157
-6.116
PG
DUT
25
O1G
O
0
1
N
N
N
5.969
-6.960
21.342
-1.738
-1.139
-5.864
O1G
DUT
26
O2G
O
0
1
N
N
N
4.930
-4.991
20.136
-1.907
0.985
-7.215
O2G
DUT
27
O3G
O
0
1
N
N
N
7.251
-4.774
21.087
0.420
-0.103
-6.661
O3G
DUT
28
HN3
H
0
1
N
N
N
12.013
-5.195
31.394
-2.536
-1.775
5.575
HN3
DUT
29
H5
H
0
1
N
N
N
12.923
-5.242
27.239
-2.243
1.910
7.503
H5
DUT
30
H6
H
0
1
N
N
N
11.204
-3.692
26.914
-0.237
2.374
6.194
H6
DUT
31
H1*
H
0
1
N
N
N
9.010
-2.439
29.708
1.266
1.787
4.606
H1'
DUT
32
1H2*
H
0
0
N
N
N
9.538
-0.328
28.833
1.513
-1.199
5.011
H2'1
DUT
33
2H2*
H
0
0
N
N
N
11.074
-0.928
28.680
2.692
0.097
5.386
H2'2
DUT
34
H3*
H
0
1
N
N
N
10.815
-1.558
26.306
2.525
-1.526
2.962
H3'
DUT
35
H4*
H
0
1
N
N
N
7.748
-1.448
26.620
2.427
1.410
2.250
H4'
DUT
36
*HO3
H
0
0
N
N
N
9.575
0.097
25.306
4.442
-0.756
3.978
HO3'
DUT
37
1H5*
H
0
0
N
N
N
9.356
-2.357
24.555
2.690
-0.345
0.507
H5'1
DUT
38
2H5*
H
0
0
N
N
N
9.052
-3.819
25.346
1.189
-1.123
1.062
H5'2
DUT
39
2HOA
H
0
0
N
N
N
5.124
-3.167
27.269
-0.822
-1.237
-0.733
HOA2
DUT
40
2HOB
H
0
0
N
N
N
2.879
-3.980
21.903
1.726
0.726
-4.409
HOB2
DUT
41
2HOG
H
0
0
N
N
N
5.295
-5.292
19.312
-1.924
0.446
-8.018
HOG2
DUT
42
3HOG
H
0
0
N
N
N
7.616
-5.075
20.263
0.818
0.764
-6.812
HOG3
DUT
43
sing
N
N
1
sing
N
N
2
sing
N
N
3
sing
N
N
4
doub
N
N
5
sing
N
N
6
sing
N
N
7
sing
N
N
8
doub
N
N
9
doub
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
sing
N
N
25
sing
N
N
26
sing
N
N
27
sing
N
N
28
sing
N
N
29
doub
N
N
30
sing
N
N
31
sing
N
N
32
sing
N
N
33
sing
N
N
34
doub
N
N
35
sing
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
doub
N
N
40
sing
N
N
41
sing
N
N
42
sing
N
N
43
sing
N
N
44
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)CC2O
O[C@H]1C[C@@H](O[C@@H]1CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
O[CH]1C[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
C1[C@@H]([C@H](O[C@H]1N2C=CC(=O)NC2=O)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O
C1C(C(OC1N2C=CC(=O)NC2=O)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
InChI=1S/C9H15N2O14P3/c12-5-3-8(11-2-1-7(13)10-9(11)14)23-6(5)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,20,21)(H,10,13,14)(H2,15,16,17)/t5-,6+,8+/m0/s1
AHCYMLUZIRLXAA-SHYZEUOFSA-N
2'-deoxyuridine 5'-(tetrahydrogen triphosphate)
[(2R,3S,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl (hydroxy-phosphonooxy-phosphoryl) hydrogen phosphate
RCSB
RCSB