data_DXP # _chem_comp.id DXP _chem_comp.name 1-DEOXY-D-XYLULOSE-5-PHOSPHATE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type ATOMS _chem_comp.formula "C5 H11 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-07-03 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 214.110 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DXP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1IXN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DXP C1 C1 C 0 1 N N N -1.045 -16.570 -4.109 1.644 0.083 4.155 C1 DXP 1 DXP C2 C2 C 0 1 N N N -0.368 -15.762 -5.140 0.279 -0.034 3.526 C2 DXP 2 DXP C3 C3 C 0 1 N N S 0.047 -14.351 -4.834 0.126 -0.674 2.171 C3 DXP 3 DXP C4 C4 C 0 1 N N R -0.994 -13.245 -5.080 0.254 0.394 1.084 C4 DXP 4 DXP C5 C5 C 0 1 N N N -0.504 -11.974 -4.397 0.098 -0.256 -0.291 C5 DXP 5 DXP O2 O2 O 0 1 N N N -0.143 -16.276 -6.235 -0.691 0.385 4.109 O2 DXP 6 DXP O3 O3 O 0 1 N N N 1.187 -14.059 -5.619 -1.156 -1.296 2.080 O3 DXP 7 DXP O4 O4 O 0 1 N N N -1.071 -12.986 -6.485 -0.765 1.379 1.263 O4 DXP 8 DXP O5 O5 O 0 1 N N N -1.383 -10.853 -4.617 0.217 0.742 -1.307 O5 DXP 9 DXP P P P 0 1 N N N -0.860 -9.597 -3.985 0.045 -0.008 -2.720 P DXP 10 DXP O2P O2P O 0 1 N N N -0.587 -9.758 -2.516 0.168 1.063 -3.916 O2P DXP 11 DXP O1P O1P O 0 1 N N N -1.829 -8.475 -4.180 1.194 -1.124 -2.879 O1P DXP 12 DXP O3P O3P O 0 1 N N N 0.328 -9.261 -4.529 -1.283 -0.657 -2.775 O3P DXP 13 DXP HC11 1HC1 H 0 0 N N N -1.353 -17.617 -4.336 1.556 0.569 5.126 HC11 DXP 14 DXP HC12 2HC1 H 0 0 N N N -0.408 -16.580 -3.193 2.071 -0.911 4.284 HC12 DXP 15 DXP HC13 3HC1 H 0 0 N N N -1.939 -16.008 -3.751 2.292 0.675 3.509 HC13 DXP 16 DXP HC3 HC3 H 0 1 N N N 0.223 -14.334 -3.733 0.904 -1.426 2.034 HC3 DXP 17 DXP HC4 HC4 H 0 1 N N N -1.989 -13.557 -4.685 1.233 0.868 1.153 HC4 DXP 18 DXP H51 H51 H 0 1 N N N -0.335 -12.143 -3.307 0.876 -1.007 -0.428 H51 DXP 19 DXP H52 H52 H 0 1 N N N 0.539 -11.731 -4.704 -0.880 -0.730 -0.361 H52 DXP 20 DXP HO3 HO3 H 0 1 N N N 1.449 -13.166 -5.425 -1.814 -0.598 2.206 HO3 DXP 21 DXP HO4 HO4 H 0 1 N N N -1.713 -12.303 -6.636 -1.613 0.919 1.194 HO4 DXP 22 DXP HOP2 2HOP H 0 0 N N N -0.255 -8.962 -2.115 0.059 0.573 -4.742 HOP2 DXP 23 DXP HOP1 1HOP H 0 0 N N N -1.497 -7.679 -3.779 2.042 -0.660 -2.838 HOP1 DXP 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DXP C1 C2 SING N N 1 DXP C1 HC11 SING N N 2 DXP C1 HC12 SING N N 3 DXP C1 HC13 SING N N 4 DXP C2 C3 SING N N 5 DXP C2 O2 DOUB N N 6 DXP C3 C4 SING N N 7 DXP C3 O3 SING N N 8 DXP C3 HC3 SING N N 9 DXP C4 C5 SING N N 10 DXP C4 O4 SING N N 11 DXP C4 HC4 SING N N 12 DXP C5 O5 SING N N 13 DXP C5 H51 SING N N 14 DXP C5 H52 SING N N 15 DXP O3 HO3 SING N N 16 DXP O4 HO4 SING N N 17 DXP O5 P SING N N 18 DXP P O2P SING N N 19 DXP P O1P SING N N 20 DXP P O3P DOUB N N 21 DXP O2P HOP2 SING N N 22 DXP O1P HOP1 SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DXP SMILES ACDLabs 10.04 "O=P(O)(O)OCC(O)C(O)C(=O)C" DXP SMILES_CANONICAL CACTVS 3.341 "CC(=O)[C@@H](O)[C@H](O)CO[P](O)(O)=O" DXP SMILES CACTVS 3.341 "CC(=O)[CH](O)[CH](O)CO[P](O)(O)=O" DXP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)[C@H]([C@@H](COP(=O)(O)O)O)O" DXP SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)C(C(COP(=O)(O)O)O)O" DXP InChI InChI 1.03 "InChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)/t4-,5-/m1/s1" DXP InChIKey InChI 1.03 AJPADPZSRRUGHI-RFZPGFLSSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DXP "SYSTEMATIC NAME" ACDLabs 10.04 1-deoxy-5-O-phosphono-D-xylulose DXP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S)-2,3-dihydroxy-4-oxo-pentyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DXP "Create component" 2002-07-03 RCSB DXP "Modify descriptor" 2011-06-04 RCSB #