data_DXT # _chem_comp.id DXT _chem_comp.name "(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H24 N2 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "DOXYTETRACYCLINE; DOXYCYCLINE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-12-27 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 444.435 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DXT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DXT C1 C1 C 0 1 N N N 18.480 32.379 33.691 6.393 -4.070 4.542 C1 DXT 1 DXT O1 O1 O 0 1 N N N 17.808 32.926 32.754 5.386 -4.660 4.935 O1 DXT 2 DXT C2 C2 C 0 1 N N N 18.168 31.162 34.333 7.257 -3.356 5.534 C2 DXT 3 DXT O21 O21 O 0 1 N N N 16.474 29.589 34.773 7.413 -4.295 7.689 O21 DXT 4 DXT C21 C21 C 0 1 N N N 16.939 30.498 34.026 6.955 -3.411 6.973 C21 DXT 5 DXT N21 N21 N 0 1 N N N 16.214 30.785 32.944 6.134 -2.395 7.393 N21 DXT 6 DXT C3 C3 C 0 1 N N N 18.809 30.827 35.464 8.332 -2.662 5.119 C3 DXT 7 DXT O3 O3 O 0 1 N N N 18.723 29.640 36.046 9.153 -2.008 6.025 O3 DXT 8 DXT C4 C4 C 0 1 N N R 19.650 31.805 36.291 8.727 -2.492 3.668 C4 DXT 9 DXT N4 N4 N 0 1 N N N 20.808 31.035 36.953 9.913 -3.313 3.382 N4 DXT 10 DXT C41 C41 C 0 1 N N N 21.445 31.793 38.109 11.026 -2.900 4.232 C41 DXT 11 DXT C42 C42 C 0 1 N N N 21.989 30.639 36.081 10.270 -3.204 1.971 C42 DXT 12 DXT C4A C4A C 0 1 N N S 20.001 33.053 35.516 7.556 -2.799 2.688 C4A DXT 13 DXT C5 C5 C 0 1 N N S 19.160 34.247 35.961 6.564 -1.611 2.602 C5 DXT 14 DXT O5 O5 O 0 1 N N N 18.890 34.276 37.322 7.306 -0.512 2.054 O5 DXT 15 DXT C5A C5A C 0 1 N N R 19.495 35.576 35.335 5.327 -1.881 1.702 C5A DXT 16 DXT C6 C6 C 0 1 N N R 18.444 36.660 35.469 4.029 -1.152 2.188 C6 DXT 17 DXT C61 C61 C 0 1 N N N 17.962 36.804 36.897 4.259 0.341 2.478 C61 DXT 18 DXT C6A C6A C 0 1 Y N N 19.043 37.894 34.911 2.890 -1.400 1.193 C6A DXT 19 DXT C7 C7 C 0 1 Y N N 18.696 39.122 35.412 1.837 -0.484 1.018 C7 DXT 20 DXT C8 C8 C 0 1 Y N N 19.260 40.259 34.873 0.796 -0.729 0.118 C8 DXT 21 DXT C9 C9 C 0 1 Y N N 20.163 40.229 33.831 0.777 -1.904 -0.621 C9 DXT 22 DXT C10 C10 C 0 1 Y N N 20.516 39.028 33.293 1.792 -2.841 -0.453 C10 DXT 23 DXT O10 O10 O 0 1 N N N 21.369 38.991 32.283 1.705 -3.978 -1.202 O10 DXT 24 DXT C6B C6B C 0 1 Y N N 19.962 37.854 33.869 2.838 -2.597 0.452 C6B DXT 25 DXT C11 C11 C 0 1 N N N 20.436 36.559 33.333 3.866 -3.650 0.621 C11 DXT 26 DXT O11 O11 O 0 1 N N N 21.065 36.588 32.240 3.788 -4.707 0.007 O11 DXT 27 DXT C5B C5B C 0 1 N N N 20.080 35.433 33.958 4.993 -3.348 1.550 C5B DXT 28 DXT C12 C12 C 0 1 N N N 20.265 34.185 33.356 5.641 -4.348 2.179 C12 DXT 29 DXT O12 O12 O 0 1 N N N 20.852 34.082 32.228 5.298 -5.685 2.073 O12 DXT 30 DXT C4B C4B C 0 1 N N S 19.851 32.902 34.024 6.830 -4.098 3.073 C4B DXT 31 DXT O13 O13 O 0 1 N N N 20.806 31.881 33.574 7.747 -5.187 2.968 O13 DXT 32 DXT H10 H10 H 0 1 N N N 20.889 38.982 31.463 1.704 -4.757 -0.625 H10 DXT 33 DXT H12 H12 H 0 1 N N N 20.204 34.056 31.534 4.860 -5.839 1.232 H12 DXT 34 DXT H13 H13 H 0 1 N N N 21.012 32.022 32.657 7.505 -5.817 3.663 H13 DXT 35 DXT H211 1H21 H 0 0 N N N 16.652 31.509 32.411 5.873 -2.355 8.373 H211 DXT 36 DXT H212 2H21 H 0 0 N N N 15.353 30.339 32.700 5.775 -1.682 6.765 H212 DXT 37 DXT HO3 HO3 H 0 1 N N N 18.702 28.962 35.381 8.615 -1.498 6.634 HO3 DXT 38 DXT H4 H4 H 0 1 N N N 19.067 32.223 37.125 9.042 -1.452 3.526 H4 DXT 39 DXT H411 1H41 H 0 0 N N N 21.599 31.109 38.956 10.730 -2.938 5.283 H411 DXT 40 DXT H412 2H41 H 0 0 N N N 22.414 32.203 37.789 11.329 -1.879 3.988 H412 DXT 41 DXT H413 3H41 H 0 0 N N N 20.782 32.615 38.417 11.881 -3.565 4.083 H413 DXT 42 DXT H421 1H42 H 0 0 N N N 21.658 30.543 35.036 10.951 -4.013 1.693 H421 DXT 43 DXT H422 2H42 H 0 0 N N N 22.770 31.411 36.149 10.763 -2.247 1.779 H422 DXT 44 DXT H423 3H42 H 0 0 N N N 22.393 29.676 36.427 9.374 -3.268 1.349 H423 DXT 45 DXT H4A H4A H 0 1 N N N 21.064 33.227 35.739 8.009 -2.920 1.691 H4A DXT 46 DXT H5 H5 H 0 1 N N N 18.183 34.043 35.499 6.241 -1.311 3.605 H5 DXT 47 DXT HO5 HO5 H 0 1 N N N 19.707 34.283 37.807 7.864 -0.885 1.355 HO5 DXT 48 DXT H5A H5A H 0 1 N N N 20.301 35.977 35.967 5.569 -1.499 0.698 H5A DXT 49 DXT H6 H6 H 0 1 N N N 17.531 36.410 34.909 3.710 -1.604 3.138 H6 DXT 50 DXT H7 H7 H 0 1 N N N 17.986 39.198 36.223 1.811 0.442 1.588 H7 DXT 51 DXT H8 H8 H 0 1 N N N 18.982 41.217 35.286 0.001 0.001 -0.001 H8 DXT 52 DXT H9 H9 H 0 1 N N N 20.585 41.146 33.446 -0.029 -2.099 -1.322 H9 DXT 53 DXT H611 1H61 H 0 0 N N N 18.828 36.839 37.575 5.144 0.479 3.107 H611 DXT 54 DXT H612 2H61 H 0 0 N N N 17.381 37.733 36.996 4.410 0.895 1.547 H612 DXT 55 DXT H613 3H61 H 0 0 N N N 17.327 35.945 37.158 3.397 0.769 2.998 H613 DXT 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DXT C1 C4B SING N N 1 DXT C1 O1 DOUB N N 2 DXT C1 C2 SING N N 3 DXT C2 C21 SING N N 4 DXT C2 C3 DOUB N N 5 DXT O21 C21 DOUB N N 6 DXT C21 N21 SING N N 7 DXT N21 H211 SING N N 8 DXT N21 H212 SING N N 9 DXT C3 O3 SING N N 10 DXT C3 C4 SING N N 11 DXT O3 HO3 SING N N 12 DXT C4 H4 SING N N 13 DXT C4 N4 SING N N 14 DXT C4 C4A SING N N 15 DXT N4 C41 SING N N 16 DXT N4 C42 SING N N 17 DXT C41 H411 SING N N 18 DXT C41 H412 SING N N 19 DXT C41 H413 SING N N 20 DXT C42 H421 SING N N 21 DXT C42 H422 SING N N 22 DXT C42 H423 SING N N 23 DXT C4A C4B SING N N 24 DXT C4A H4A SING N N 25 DXT C4A C5 SING N N 26 DXT C5 H5 SING N N 27 DXT C5 O5 SING N N 28 DXT C5 C5A SING N N 29 DXT O5 HO5 SING N N 30 DXT C5A C5B SING N N 31 DXT C5A H5A SING N N 32 DXT C5A C6 SING N N 33 DXT C6 H6 SING N N 34 DXT C6 C6A SING N N 35 DXT C6 C61 SING N N 36 DXT C61 H611 SING N N 37 DXT C61 H612 SING N N 38 DXT C61 H613 SING N N 39 DXT C6A C6B SING Y N 40 DXT C6A C7 DOUB Y N 41 DXT C7 H7 SING N N 42 DXT C7 C8 SING Y N 43 DXT C8 H8 SING N N 44 DXT C8 C9 DOUB Y N 45 DXT C9 C10 SING Y N 46 DXT C9 H9 SING N N 47 DXT C10 O10 SING N N 48 DXT C10 C6B DOUB Y N 49 DXT O10 H10 SING N N 50 DXT C6B C11 SING N N 51 DXT C11 O11 DOUB N N 52 DXT C11 C5B SING N N 53 DXT C5B C12 DOUB N N 54 DXT C12 O12 SING N N 55 DXT C12 C4B SING N N 56 DXT O12 H12 SING N N 57 DXT C4B O13 SING N N 58 DXT O13 H13 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DXT SMILES ACDLabs 10.04 "O=C3C2=C(O)C1(O)C(=O)C(=C(O)C(N(C)C)C1C(O)C2C(c4cccc(O)c34)C)C(=O)N" DXT SMILES_CANONICAL CACTVS 3.341 "C[C@@H]1[C@H]2[C@H](O)[C@H]3[C@H](N(C)C)C(=C(C(N)=O)C(=O)[C@@]3(O)C(=C2C(=O)c4c(O)cccc14)O)O" DXT SMILES CACTVS 3.341 "C[CH]1[CH]2[CH](O)[CH]3[CH](N(C)C)C(=C(C(N)=O)C(=O)[C]3(O)C(=C2C(=O)c4c(O)cccc14)O)O" DXT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]1c2cccc(c2C(=O)C3=C([C@]4([C@@H]([C@H]([C@H]13)O)[C@@H](C(=C(C4=O)C(=O)N)O)N(C)C)O)O)O" DXT SMILES "OpenEye OEToolkits" 1.5.0 "CC1c2cccc(c2C(=O)C3=C(C4(C(C(C13)O)C(C(=C(C4=O)C(=O)N)O)N(C)C)O)O)O" DXT InChI InChI 1.03 "InChI=1S/C22H24N2O8/c1-7-8-5-4-6-9(25)11(8)16(26)12-10(7)17(27)14-15(24(2)3)18(28)13(21(23)31)20(30)22(14,32)19(12)29/h4-7,10,14-15,17,25,27-29,32H,1-3H3,(H2,23,31)/t7-,10+,14+,15-,17-,22-/m0/s1" DXT InChIKey InChI 1.03 JBIWCJUYHHGXTC-AKNGSSGZSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DXT "SYSTEMATIC NAME" ACDLabs 10.04 "(4S,4aR,5S,5aR,6R,12aS)-4-(dimethylamino)-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide" DXT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(4S,4aR,5S,5aR,6R,12aS)-4-dimethylamino-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-4a,5,5a,6-tetrahydro-4H-tetracene-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DXT "Create component" 2006-12-27 RCSB DXT "Modify descriptor" 2011-06-04 RCSB DXT "Modify synonyms" 2020-05-27 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 DXT DOXYTETRACYCLINE ? ? 2 DXT DOXYCYCLINE ? ? #