data_DXZ # _chem_comp.id DXZ _chem_comp.name "N-({4-[(1R)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 N5 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-12-17 _chem_comp.pdbx_modified_date 2013-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 477.534 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DXZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3F4Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DXZ OE1 OE1 O 0 1 N N N 1.385 72.172 88.249 -8.010 2.222 -2.050 OE1 DXZ 1 DXZ CD CD C 0 1 N N N 1.058 72.055 89.461 -7.503 2.493 -0.987 CD DXZ 2 DXZ OE2 OE2 O 0 1 N N N 0.081 72.660 90.011 -7.586 3.742 -0.503 OE2 DXZ 3 DXZ CG CG C 0 1 N N N 1.987 71.112 90.314 -6.784 1.427 -0.202 CG DXZ 4 DXZ CB CB C 0 1 N N N 3.113 71.866 91.041 -6.841 0.103 -0.968 CB DXZ 5 DXZ CA CA C 0 1 N N S 3.697 71.078 92.234 -6.110 -0.979 -0.170 CA DXZ 6 DXZ C C C 0 1 N N N 3.832 72.026 93.429 -6.271 -2.308 -0.863 C DXZ 7 DXZ OXT OXT O 0 1 N N N 2.937 72.028 94.292 -7.497 -2.820 -1.056 OXT DXZ 8 DXZ O O O 0 1 N N N 4.824 72.769 93.430 -5.297 -2.913 -1.244 O DXZ 9 DXZ N N N 0 1 N N N 2.914 69.868 92.554 -4.687 -0.643 -0.082 N DXZ 10 DXZ CAY CAY C 0 1 N N N 3.512 68.694 92.663 -3.944 -1.119 0.937 CAY DXZ 11 DXZ OAF OAF O 0 1 N N N 4.722 68.542 92.491 -4.455 -1.826 1.783 OAF DXZ 12 DXZ CBB CBB C 0 1 Y N N 2.612 67.536 92.990 -2.508 -0.780 1.026 CBB DXZ 13 DXZ CAK CAK C 0 1 Y N N 1.264 67.735 93.127 -1.736 -1.270 2.080 CAK DXZ 14 DXZ CAM CAM C 0 1 Y N N 0.442 66.652 93.419 -0.396 -0.951 2.157 CAM DXZ 15 DXZ CAJ CAJ C 0 1 Y N N 3.114 66.262 93.195 -1.916 0.027 0.052 CAJ DXZ 16 DXZ CAL CAL C 0 1 Y N N 2.292 65.180 93.500 -0.575 0.339 0.141 CAL DXZ 17 DXZ CBC CBC C 0 1 Y N N 0.924 65.372 93.615 0.183 -0.146 1.192 CBC DXZ 18 DXZ CBG CBG C 0 1 N N R -0.037 64.220 93.968 1.647 0.199 1.283 CBG DXZ 19 DXZ SAV SAV S 0 1 N N N -0.962 63.680 92.475 1.837 2.000 1.403 SAV DXZ 20 DXZ CAA CAA C 0 1 N N N -2.573 64.473 92.657 1.063 2.386 2.997 CAA DXZ 21 DXZ CAQ CAQ C 0 1 N N N -1.041 64.615 95.111 2.369 -0.307 0.032 CAQ DXZ 22 DXZ CAN CAN C 0 1 N N N -0.375 64.599 96.478 3.873 -0.068 0.179 CAN DXZ 23 DXZ CAP CAP C 0 1 N N N -1.310 64.865 97.697 4.594 -0.575 -1.071 CAP DXZ 24 DXZ CBD CBD C 0 1 N N N -0.447 65.602 98.703 6.076 -0.339 -0.926 CBD DXZ 25 DXZ CBE CBE C 0 1 N N N 0.335 64.892 99.620 6.638 0.895 -1.265 CBE DXZ 26 DXZ OAG OAG O 0 1 N N N 0.320 63.662 99.664 5.936 1.803 -1.684 OAG DXZ 27 DXZ NAU NAU N 0 1 N N N 1.122 65.559 100.511 7.968 1.067 -1.120 NAU DXZ 28 DXZ CAZ CAZ C 0 1 N N N 1.187 66.941 100.490 8.742 0.050 -0.653 CAZ DXZ 29 DXZ NAB NAB N 0 1 N N N 1.987 67.565 101.343 10.091 0.243 -0.513 NAB DXZ 30 DXZ NAS NAS N 0 1 N N N 0.437 67.631 99.605 8.221 -1.115 -0.331 NAS DXZ 31 DXZ CBA CBA C 0 1 N N N -0.360 67.003 98.722 6.907 -1.342 -0.448 CBA DXZ 32 DXZ NAC NAC N 0 1 N N N -1.076 67.750 97.849 6.383 -2.570 -0.100 NAC DXZ 33 DXZ H1G H1G H 0 1 N N N 1.366 70.609 91.070 -5.743 1.720 -0.060 H1G DXZ 34 DXZ H2G H2G H 0 1 N N N 2.461 70.403 89.620 -7.262 1.306 0.770 H2G DXZ 35 DXZ H1B H1B H 0 1 N N N 3.923 72.054 90.321 -7.881 -0.190 -1.109 H1B DXZ 36 DXZ H2B H2B H 0 1 N N N 2.684 72.797 91.439 -6.362 0.225 -1.939 H2B DXZ 37 DXZ HA HA H 0 1 N N N 4.694 70.702 91.961 -6.532 -1.039 0.833 HA DXZ 38 DXZ HN HN H 0 1 N N N 1.926 69.937 92.689 -4.279 -0.079 -0.758 HN DXZ 39 DXZ HAK HAK H 0 1 N N N 0.844 68.723 93.009 -2.186 -1.898 2.834 HAK DXZ 40 DXZ HAM HAM H 0 1 N N N -0.622 66.819 93.496 0.202 -1.329 2.973 HAM DXZ 41 DXZ HAJ HAJ H 0 1 N N N 4.179 66.102 93.116 -2.507 0.405 -0.769 HAJ DXZ 42 DXZ HAL HAL H 0 1 N N N 2.717 64.198 93.646 -0.116 0.963 -0.612 HAL DXZ 43 DXZ HBG HBG H 0 1 N N N 0.577 63.386 94.340 2.077 -0.271 2.166 HBG DXZ 44 DXZ H1AA H1AA H 0 0 N N N -2.784 64.634 93.724 1.120 3.459 3.178 H1AA DXZ 45 DXZ H2AA H2AA H 0 0 N N N -2.566 65.441 92.134 0.018 2.075 2.979 H2AA DXZ 46 DXZ H3AA H3AA H 0 0 N N N -3.350 63.827 92.223 1.585 1.855 3.793 H3AA DXZ 47 DXZ H1AQ H1AQ H 0 0 N N N -1.418 65.629 94.914 2.180 -1.374 -0.089 H1AQ DXZ 48 DXZ H2AQ H2AQ H 0 0 N N N -1.859 63.879 95.119 2.000 0.229 -0.842 H2AQ DXZ 49 DXZ H1AN H1AN H 0 0 N N N 0.068 63.601 96.616 4.061 0.999 0.301 H1AN DXZ 50 DXZ H2AN H2AN H 0 0 N N N 0.349 65.427 96.469 4.242 -0.604 1.054 H2AN DXZ 51 DXZ H1AP H1AP H 0 0 N N N -2.177 65.474 97.402 4.406 -1.641 -1.192 H1AP DXZ 52 DXZ H2AP H2AP H 0 0 N N N -1.718 63.932 98.112 4.225 -0.039 -1.946 H2AP DXZ 53 DXZ HNAU HNAU H 0 0 N N N 1.656 65.046 101.184 8.374 1.918 -1.351 HNAU DXZ 54 DXZ H1AB H1AB H 0 0 N N N 1.921 68.553 101.203 10.485 1.098 -0.747 H1AB DXZ 55 DXZ H2AB H2AB H 0 0 N N N 2.567 67.117 102.023 10.652 -0.475 -0.181 H2AB DXZ 56 DXZ H1AC H1AC H 0 0 N N N -1.253 68.650 98.247 5.431 -2.734 -0.190 H1AC DXZ 57 DXZ H2AC H2AC H 0 0 N N N -0.559 67.856 97.000 6.966 -3.270 0.233 H2AC DXZ 58 DXZ HOE2 HOE2 H 0 0 N N N -0.356 73.207 89.368 -8.061 4.390 -1.041 HOE2 DXZ 59 DXZ HOXT HOXT H 0 0 N N N 3.132 72.685 94.949 -7.550 -3.675 -1.505 HOXT DXZ 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DXZ OE1 CD DOUB N N 1 DXZ CD OE2 SING N N 2 DXZ CD CG SING N N 3 DXZ CG CB SING N N 4 DXZ CB CA SING N N 5 DXZ CA N SING N N 6 DXZ CA C SING N N 7 DXZ SAV CAA SING N N 8 DXZ SAV CBG SING N N 9 DXZ OAF CAY DOUB N N 10 DXZ N CAY SING N N 11 DXZ CAY CBB SING N N 12 DXZ CBB CAK DOUB Y N 13 DXZ CBB CAJ SING Y N 14 DXZ CAK CAM SING Y N 15 DXZ CAJ CAL DOUB Y N 16 DXZ CAM CBC DOUB Y N 17 DXZ C O DOUB N N 18 DXZ C OXT SING N N 19 DXZ CAL CBC SING Y N 20 DXZ CBC CBG SING N N 21 DXZ CBG CAQ SING N N 22 DXZ CAQ CAN SING N N 23 DXZ CAN CAP SING N N 24 DXZ CAP CBD SING N N 25 DXZ NAC CBA SING N N 26 DXZ CBD CBA DOUB N N 27 DXZ CBD CBE SING N N 28 DXZ CBA NAS SING N N 29 DXZ NAS CAZ DOUB N N 30 DXZ CBE OAG DOUB N N 31 DXZ CBE NAU SING N N 32 DXZ CAZ NAU SING N N 33 DXZ CAZ NAB SING N N 34 DXZ CG H1G SING N N 35 DXZ CG H2G SING N N 36 DXZ CB H1B SING N N 37 DXZ CB H2B SING N N 38 DXZ CA HA SING N N 39 DXZ N HN SING N N 40 DXZ CAK HAK SING N N 41 DXZ CAM HAM SING N N 42 DXZ CAJ HAJ SING N N 43 DXZ CAL HAL SING N N 44 DXZ CBG HBG SING N N 45 DXZ CAA H1AA SING N N 46 DXZ CAA H2AA SING N N 47 DXZ CAA H3AA SING N N 48 DXZ CAQ H1AQ SING N N 49 DXZ CAQ H2AQ SING N N 50 DXZ CAN H1AN SING N N 51 DXZ CAN H2AN SING N N 52 DXZ CAP H1AP SING N N 53 DXZ CAP H2AP SING N N 54 DXZ NAU HNAU SING N N 55 DXZ NAB H1AB SING N N 56 DXZ NAB H2AB SING N N 57 DXZ NAC H1AC SING N N 58 DXZ NAC H2AC SING N N 59 DXZ OE2 HOE2 SING N N 60 DXZ OXT HOXT SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DXZ SMILES ACDLabs 10.04 "O=C1C(=C(N=C(N)N1)N)CCCC(SC)c2ccc(C(=O)NC(C(=O)O)CCC(=O)O)cc2" DXZ SMILES_CANONICAL CACTVS 3.341 "CS[C@H](CCCC1=C(N)N=C(N)NC1=O)c2ccc(cc2)C(=O)N[C@@H](CCC(O)=O)C(O)=O" DXZ SMILES CACTVS 3.341 "CS[CH](CCCC1=C(N)N=C(N)NC1=O)c2ccc(cc2)C(=O)N[CH](CCC(O)=O)C(O)=O" DXZ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CS[C@H](CCCC1=C(N=C(NC1=O)N)N)c2ccc(cc2)C(=O)N[C@@H](CCC(=O)O)C(=O)O" DXZ SMILES "OpenEye OEToolkits" 1.5.0 "CSC(CCCC1=C(N=C(NC1=O)N)N)c2ccc(cc2)C(=O)NC(CCC(=O)O)C(=O)O" DXZ InChI InChI 1.03 "InChI=1S/C21H27N5O6S/c1-33-15(4-2-3-13-17(22)25-21(23)26-19(13)30)11-5-7-12(8-6-11)18(29)24-14(20(31)32)9-10-16(27)28/h5-8,14-15H,2-4,9-10H2,1H3,(H,24,29)(H,27,28)(H,31,32)(H5,22,23,25,26,30)/t14-,15+/m0/s1" DXZ InChIKey InChI 1.03 GEZLAVXTPLTVRU-LSDHHAIUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DXZ "SYSTEMATIC NAME" ACDLabs 10.04 "N-({4-[(1R)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid" DXZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[[4-[(1R)-4-(2,4-diamino-6-oxo-1H-pyrimidin-5-yl)-1-methylsulfanyl-butyl]phenyl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DXZ "Create component" 2008-12-17 RCSB DXZ "Modify aromatic_flag" 2011-06-04 RCSB DXZ "Modify descriptor" 2011-06-04 RCSB DXZ "Initial release" 2013-07-31 RCSB #