data_DZU # _chem_comp.id DZU _chem_comp.name "8-[(E)-2-[5-methyl-1-[3-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]benzimidazol-2-yl]ethenyl]quinoline" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H35 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-09-26 _chem_comp.pdbx_modified_date 2020-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 517.664 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DZU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KZE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DZU C3 C1 C 0 1 Y N N 18.412 2.754 -17.712 -3.972 -5.065 0.107 C3 DZU 1 DZU C4 C2 C 0 1 Y N N 19.578 3.377 -18.214 -4.305 -3.715 -0.164 C4 DZU 2 DZU C11 C3 C 0 1 N N N 21.044 3.989 -20.149 -3.646 -1.257 -0.057 C11 DZU 3 DZU C39 C4 C 0 1 N N N 14.730 0.611 -25.152 10.173 0.185 -1.089 C39 DZU 4 DZU N36 N1 N 0 1 N N N 15.105 1.963 -25.580 9.462 -1.062 -1.404 N36 DZU 5 DZU C35 C5 C 0 1 N N N 15.450 2.798 -24.430 8.231 -0.790 -2.158 C35 DZU 6 DZU C34 C6 C 0 1 N N N 15.979 4.150 -24.880 7.264 0.008 -1.281 C34 DZU 7 DZU C37 C7 C 0 1 N N N 14.018 2.590 -26.330 9.171 -1.825 -0.183 C37 DZU 8 DZU C38 C8 C 0 1 N N N 14.316 4.057 -26.593 8.204 -1.027 0.695 C38 DZU 9 DZU N33 N2 N 0 1 N N N 15.725 4.341 -26.315 6.972 -0.755 -0.059 N33 DZU 10 DZU C32 C9 C 0 1 N N N 16.126 5.674 -26.784 5.987 -0.055 0.776 C32 DZU 11 DZU C31 C10 C 0 1 N N N 17.268 5.634 -27.795 4.642 -0.011 0.049 C31 DZU 12 DZU C30 C11 C 0 1 N N N 18.181 6.831 -27.687 3.615 0.718 0.919 C30 DZU 13 DZU O29 O1 O 0 1 N N N 19.431 6.435 -27.097 2.359 0.760 0.240 O29 DZU 14 DZU C27 C12 C 0 1 Y N N 19.575 6.529 -25.732 1.332 1.377 0.880 C27 DZU 15 DZU C26 C13 C 0 1 Y N N 18.508 6.941 -24.959 1.531 1.936 2.135 C26 DZU 16 DZU C25 C14 C 0 1 Y N N 18.682 7.101 -23.601 0.488 2.565 2.787 C25 DZU 17 DZU C24 C15 C 0 1 Y N N 19.902 6.838 -23.010 -0.757 2.638 2.193 C24 DZU 18 DZU C28 C16 C 0 1 Y N N 20.811 6.263 -25.158 0.085 1.453 0.279 C28 DZU 19 DZU C23 C17 C 0 1 Y N N 20.972 6.398 -23.777 -0.963 2.080 0.938 C23 DZU 20 DZU N14 N3 N 0 1 Y N N 22.120 5.801 -23.142 -2.223 2.160 0.333 N14 DZU 21 DZU C15 C18 C 0 1 Y N N 23.424 5.806 -23.658 -2.869 3.313 -0.076 C15 DZU 22 DZU C18 C19 C 0 1 Y N N 23.963 6.239 -24.859 -2.544 4.661 -0.041 C18 DZU 23 DZU C19 C20 C 0 1 Y N N 25.330 6.100 -25.048 -3.429 5.591 -0.544 C19 DZU 24 DZU C20 C21 C 0 1 Y N N 26.158 5.542 -24.073 -4.642 5.188 -1.084 C20 DZU 25 DZU C22 C22 C 0 1 N N N 27.641 5.392 -24.318 -5.596 6.220 -1.629 C22 DZU 26 DZU C21 C23 C 0 1 Y N N 25.587 5.122 -22.875 -4.981 3.865 -1.127 C21 DZU 27 DZU C16 C24 C 0 1 Y N N 24.223 5.251 -22.660 -4.099 2.903 -0.623 C16 DZU 28 DZU N17 N4 N 0 1 Y N N 23.451 4.911 -21.547 -4.154 1.559 -0.529 N17 DZU 29 DZU C13 C25 C 0 1 Y N N 22.210 5.237 -21.874 -3.052 1.106 0.028 C13 DZU 30 DZU C12 C26 C 0 1 N N N 21.032 4.896 -21.103 -2.754 -0.305 0.287 C12 DZU 31 DZU C10 C27 C 0 1 Y N N 19.861 3.324 -19.608 -3.348 -2.671 0.203 C10 DZU 32 DZU N5 N5 N 0 1 Y N N 20.470 4.024 -17.410 -5.468 -3.417 -0.741 N5 DZU 33 DZU C6 C28 C 0 1 Y N N 20.207 4.063 -16.116 -6.326 -4.354 -1.071 C6 DZU 34 DZU C1 C29 C 0 1 Y N N 19.089 3.497 -15.532 -6.064 -5.701 -0.834 C1 DZU 35 DZU C9 C30 C 0 1 Y N N 18.989 2.649 -20.438 -2.150 -3.045 0.803 C9 DZU 36 DZU C8 C31 C 0 1 Y N N 17.855 2.029 -19.944 -1.869 -4.381 1.048 C8 DZU 37 DZU C7 C32 C 0 1 Y N N 17.563 2.077 -18.614 -2.742 -5.371 0.710 C7 DZU 38 DZU C2 C33 C 0 1 Y N N 18.193 2.846 -16.324 -4.889 -6.074 -0.244 C2 DZU 39 DZU H1 H1 H 0 1 N N N 22.003 3.715 -19.734 -4.580 -0.979 -0.523 H1 DZU 40 DZU H2 H2 H 0 1 N N N 15.561 0.160 -24.591 9.530 0.828 -0.488 H2 DZU 41 DZU H3 H3 H 0 1 N N N 13.839 0.664 -24.509 11.080 -0.045 -0.531 H3 DZU 42 DZU H4 H4 H 0 1 N N N 14.508 -0.005 -26.036 10.436 0.697 -2.015 H4 DZU 43 DZU H6 H6 H 0 1 N N N 14.552 2.950 -23.813 8.471 -0.213 -3.052 H6 DZU 44 DZU H7 H7 H 0 1 N N N 16.222 2.289 -23.834 7.766 -1.733 -2.448 H7 DZU 45 DZU H8 H8 H 0 1 N N N 17.062 4.197 -24.693 7.718 0.962 -1.014 H8 DZU 46 DZU H9 H9 H 0 1 N N N 15.474 4.945 -24.312 6.338 0.186 -1.828 H9 DZU 47 DZU H10 H10 H 0 1 N N N 13.087 2.510 -25.750 8.717 -2.779 -0.449 H10 DZU 48 DZU H11 H11 H 0 1 N N N 13.897 2.069 -27.291 10.097 -2.003 0.365 H11 DZU 49 DZU H12 H12 H 0 1 N N N 14.099 4.289 -27.646 7.963 -1.604 1.589 H12 DZU 50 DZU H13 H13 H 0 1 N N N 13.684 4.679 -25.942 8.668 -0.084 0.985 H13 DZU 51 DZU H15 H15 H 0 1 N N N 16.447 6.269 -25.916 5.871 -0.584 1.722 H15 DZU 52 DZU H16 H16 H 0 1 N N N 15.257 6.155 -27.256 6.330 0.961 0.968 H16 DZU 53 DZU H17 H17 H 0 1 N N N 16.841 5.607 -28.808 4.757 0.518 -0.897 H17 DZU 54 DZU H18 H18 H 0 1 N N N 17.860 4.723 -27.622 4.299 -1.028 -0.143 H18 DZU 55 DZU H19 H19 H 0 1 N N N 18.364 7.243 -28.690 3.500 0.189 1.865 H19 DZU 56 DZU H20 H20 H 0 1 N N N 17.706 7.598 -27.057 3.959 1.735 1.111 H20 DZU 57 DZU H21 H21 H 0 1 N N N 17.548 7.136 -25.413 2.503 1.880 2.602 H21 DZU 58 DZU H22 H22 H 0 1 N N N 17.855 7.436 -22.992 0.646 2.999 3.763 H22 DZU 59 DZU H23 H23 H 0 1 N N N 20.024 6.975 -21.946 -1.572 3.130 2.705 H23 DZU 60 DZU H24 H24 H 0 1 N N N 21.642 5.954 -25.775 -0.071 1.022 -0.699 H24 DZU 61 DZU H25 H25 H 0 1 N N N 23.337 6.672 -25.625 -1.601 4.981 0.378 H25 DZU 62 DZU H26 H26 H 0 1 N N N 25.767 6.434 -25.978 -3.177 6.641 -0.518 H26 DZU 63 DZU H27 H27 H 0 1 N N N 28.163 6.297 -23.973 -5.387 6.386 -2.686 H27 DZU 64 DZU H28 H28 H 0 1 N N N 28.017 4.518 -23.766 -6.620 5.865 -1.513 H28 DZU 65 DZU H29 H29 H 0 1 N N N 27.822 5.252 -25.394 -5.471 7.155 -1.083 H29 DZU 66 DZU H30 H30 H 0 1 N N N 26.212 4.692 -22.106 -5.928 3.563 -1.549 H30 DZU 67 DZU H31 H31 H 0 1 N N N 20.106 5.407 -21.320 -1.820 -0.583 0.753 H31 DZU 68 DZU H32 H32 H 0 1 N N N 20.911 4.570 -15.473 -7.259 -4.074 -1.537 H32 DZU 69 DZU H33 H33 H 0 1 N N N 18.929 3.570 -14.466 -6.789 -6.450 -1.115 H33 DZU 70 DZU H34 H34 H 0 1 N N N 19.196 2.604 -21.497 -1.434 -2.287 1.085 H34 DZU 71 DZU H35 H35 H 0 1 N N N 17.196 1.503 -20.618 -0.931 -4.644 1.515 H35 DZU 72 DZU H36 H36 H 0 1 N N N 16.671 1.591 -18.246 -2.489 -6.400 0.916 H36 DZU 73 DZU H37 H37 H 0 1 N N N 17.312 2.399 -15.887 -4.670 -7.114 -0.052 H37 DZU 74 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DZU C31 C30 SING N N 1 DZU C31 C32 SING N N 2 DZU C30 O29 SING N N 3 DZU O29 C27 SING N N 4 DZU C32 N33 SING N N 5 DZU C38 C37 SING N N 6 DZU C38 N33 SING N N 7 DZU C37 N36 SING N N 8 DZU N33 C34 SING N N 9 DZU C27 C28 DOUB Y N 10 DZU C27 C26 SING Y N 11 DZU N36 C39 SING N N 12 DZU N36 C35 SING N N 13 DZU C28 C23 SING Y N 14 DZU C19 C18 DOUB Y N 15 DZU C19 C20 SING Y N 16 DZU C26 C25 DOUB Y N 17 DZU C34 C35 SING N N 18 DZU C18 C15 SING Y N 19 DZU C22 C20 SING N N 20 DZU C20 C21 DOUB Y N 21 DZU C23 N14 SING N N 22 DZU C23 C24 DOUB Y N 23 DZU C15 N14 SING Y N 24 DZU C15 C16 DOUB Y N 25 DZU C25 C24 SING Y N 26 DZU N14 C13 SING Y N 27 DZU C21 C16 SING Y N 28 DZU C16 N17 SING Y N 29 DZU C13 N17 DOUB Y N 30 DZU C13 C12 SING N N 31 DZU C12 C11 DOUB N E 32 DZU C9 C8 DOUB Y N 33 DZU C9 C10 SING Y N 34 DZU C11 C10 SING N N 35 DZU C8 C7 SING Y N 36 DZU C10 C4 DOUB Y N 37 DZU C7 C3 DOUB Y N 38 DZU C4 C3 SING Y N 39 DZU C4 N5 SING Y N 40 DZU C3 C2 SING Y N 41 DZU N5 C6 DOUB Y N 42 DZU C2 C1 DOUB Y N 43 DZU C6 C1 SING Y N 44 DZU C11 H1 SING N N 45 DZU C39 H2 SING N N 46 DZU C39 H3 SING N N 47 DZU C39 H4 SING N N 48 DZU C35 H6 SING N N 49 DZU C35 H7 SING N N 50 DZU C34 H8 SING N N 51 DZU C34 H9 SING N N 52 DZU C37 H10 SING N N 53 DZU C37 H11 SING N N 54 DZU C38 H12 SING N N 55 DZU C38 H13 SING N N 56 DZU C32 H15 SING N N 57 DZU C32 H16 SING N N 58 DZU C31 H17 SING N N 59 DZU C31 H18 SING N N 60 DZU C30 H19 SING N N 61 DZU C30 H20 SING N N 62 DZU C26 H21 SING N N 63 DZU C25 H22 SING N N 64 DZU C24 H23 SING N N 65 DZU C28 H24 SING N N 66 DZU C18 H25 SING N N 67 DZU C19 H26 SING N N 68 DZU C22 H27 SING N N 69 DZU C22 H28 SING N N 70 DZU C22 H29 SING N N 71 DZU C21 H30 SING N N 72 DZU C12 H31 SING N N 73 DZU C6 H32 SING N N 74 DZU C1 H33 SING N N 75 DZU C9 H34 SING N N 76 DZU C8 H35 SING N N 77 DZU C7 H36 SING N N 78 DZU C2 H37 SING N N 79 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DZU InChI InChI 1.03 "InChI=1S/C33H35N5O/c1-25-12-14-31-30(23-25)35-32(15-13-27-8-3-7-26-9-5-16-34-33(26)27)38(31)28-10-4-11-29(24-28)39-22-6-17-37-20-18-36(2)19-21-37/h3-5,7-16,23-24H,6,17-22H2,1-2H3/b15-13+" DZU InChIKey InChI 1.03 KQVBPBWJTADBHJ-FYWRMAATSA-N DZU SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CCCOc2cccc(c2)n3c(\C=C\c4cccc5cccnc45)nc6cc(C)ccc36)CC1" DZU SMILES CACTVS 3.385 "CN1CCN(CCCOc2cccc(c2)n3c(C=Cc4cccc5cccnc45)nc6cc(C)ccc36)CC1" DZU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)nc(n2c3cccc(c3)OCCCN4CCN(CC4)C)/C=C/c5cccc6c5nccc6" DZU SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)nc(n2c3cccc(c3)OCCCN4CCN(CC4)C)C=Cc5cccc6c5nccc6" # _pdbx_chem_comp_identifier.comp_id DZU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-[(~{E})-2-[5-methyl-1-[3-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]benzimidazol-2-yl]ethenyl]quinoline" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DZU "Create component" 2019-09-26 PDBJ DZU "Initial release" 2020-09-30 RCSB ##