data_E2A # _chem_comp.id E2A _chem_comp.name "~{O}1-methyl ~{O}3-(phenylmethyl) (1~{S},3~{R})-1-methyl-4-oxidanylidene-cyclohexane-1,3-dicarboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-18 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.338 _chem_comp.one_letter_code ? _chem_comp.three_letter_code E2A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code 8PT1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal E2A C3 C1 C 0 1 N N N N N N -23.132 -32.489 20.659 ? ? ? C3 E2A 1 E2A C4 C2 C 0 1 N N S N N N -24.108 -31.289 20.501 ? ? ? C4 E2A 2 E2A C7 C3 C 0 1 N N N N N N -24.151 -30.410 21.726 ? ? ? C7 E2A 3 E2A C14 C4 C 0 1 N N N N N N -23.918 -30.562 19.218 ? ? ? C14 E2A 4 E2A C15 C5 C 0 1 N N N N N N -24.205 -28.457 18.053 ? ? ? C15 E2A 5 E2A C5 C6 C 0 1 N N N N N N -25.568 -31.601 20.347 ? ? ? C5 E2A 6 E2A C6 C7 C 0 1 N N N N N N -25.915 -32.435 21.531 ? ? ? C6 E2A 7 E2A C1 C8 C 0 1 N N N N N N -25.364 -33.725 21.047 ? ? ? C1 E2A 8 E2A C2 C9 C 0 1 N N N N N N -23.983 -33.783 20.460 ? ? ? C2 E2A 9 E2A C16 C10 C 0 1 N N N N N N -23.408 -35.101 20.902 ? ? ? C16 E2A 10 E2A C17 C11 C 0 1 N N N N N N -21.797 -36.454 22.134 ? ? ? C17 E2A 11 E2A C18 C12 C 0 1 Y N N N N N -20.821 -36.170 23.227 ? ? ? C18 E2A 12 E2A C23 C13 C 0 1 Y N N N N N -19.965 -35.111 23.100 ? ? ? C23 E2A 13 E2A C22 C14 C 0 1 Y N N N N N -19.072 -34.898 24.122 ? ? ? C22 E2A 14 E2A C21 C15 C 0 1 Y N N N N N -19.037 -35.712 25.231 ? ? ? C21 E2A 15 E2A C20 C16 C 0 1 Y N N N N N -19.904 -36.769 25.342 ? ? ? C20 E2A 16 E2A C19 C17 C 0 1 Y N N N N N -20.801 -36.994 24.331 ? ? ? C19 E2A 17 E2A O O1 O 0 1 N N N N N N -23.630 -29.159 19.141 ? ? ? O E2A 18 E2A O1 O2 O 0 1 N N N N N N -24.102 -31.168 18.198 ? ? ? O1 E2A 19 E2A O4 O3 O 0 1 N N N N N N -26.111 -34.673 21.103 ? ? ? O4 E2A 20 E2A O2 O4 O 0 1 N N N N N N -24.064 -36.128 20.843 ? ? ? O2 E2A 21 E2A O3 O5 O 0 1 N N N N N N -22.084 -35.233 21.469 ? ? ? O3 E2A 22 E2A H1 H1 H 0 1 N N N N N N -22.680 -32.482 21.662 ? ? ? H1 E2A 23 E2A H2 H2 H 0 1 N N N N N N -22.338 -32.436 19.899 ? ? ? H2 E2A 24 E2A H3 H3 H 0 1 N N N N N N -24.294 -31.034 22.621 ? ? ? H3 E2A 25 E2A H4 H4 H 0 1 N N N N N N -23.205 -29.856 21.813 ? ? ? H4 E2A 26 E2A H5 H5 H 0 1 N N N N N N -24.986 -29.699 21.638 ? ? ? H5 E2A 27 E2A H6 H6 H 0 1 N N N N N N -23.913 -27.398 18.104 ? ? ? H6 E2A 28 E2A H7 H7 H 0 1 N N N N N N -23.848 -28.891 17.107 ? ? ? H7 E2A 29 E2A H8 H8 H 0 1 N N N N N N -25.301 -28.538 18.103 ? ? ? H8 E2A 30 E2A H9 H9 H 0 1 N N N N N N -26.162 -30.675 20.340 ? ? ? H9 E2A 31 E2A H10 H10 H 0 1 N N N N N N -25.747 -32.159 19.416 ? ? ? H10 E2A 32 E2A H11 H11 H 0 1 N N N N N N -25.415 -32.086 22.447 ? ? ? H11 E2A 33 E2A H12 H12 H 0 1 N N N N N N -27.001 -32.484 21.702 ? ? ? H12 E2A 34 E2A H13 H13 H 0 1 N N N N N N -24.124 -33.869 19.373 ? ? ? H13 E2A 35 E2A H14 H14 H 0 1 N N N N N N -22.721 -36.873 22.559 ? ? ? H14 E2A 36 E2A H15 H15 H 0 1 N N N N N N -21.362 -37.172 21.423 ? ? ? H15 E2A 37 E2A H16 H16 H 0 1 N N N N N N -19.990 -34.469 22.232 ? ? ? H16 E2A 38 E2A H17 H17 H 0 1 N N N N N N -18.380 -34.071 24.053 ? ? ? H17 E2A 39 E2A H18 H18 H 0 1 N N N N N N -18.323 -35.518 26.018 ? ? ? H18 E2A 40 E2A H19 H19 H 0 1 N N N N N N -19.880 -37.412 26.210 ? ? ? H19 E2A 41 E2A H20 H20 H 0 1 N N N N N N -21.494 -37.819 24.400 ? ? ? H20 E2A 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal E2A C15 O SING N N 1 E2A O1 C14 DOUB N N 2 E2A O C14 SING N N 3 E2A C14 C4 SING N N 4 E2A C5 C4 SING N N 5 E2A C5 C6 SING N N 6 E2A C2 C3 SING N N 7 E2A C2 C16 SING N N 8 E2A C2 C1 SING N N 9 E2A C4 C3 SING N N 10 E2A C4 C7 SING N N 11 E2A O2 C16 DOUB N N 12 E2A C16 O3 SING N N 13 E2A C1 O4 DOUB N N 14 E2A C1 C6 SING N N 15 E2A O3 C17 SING N N 16 E2A C17 C18 SING N N 17 E2A C23 C18 DOUB Y N 18 E2A C23 C22 SING Y N 19 E2A C18 C19 SING Y N 20 E2A C22 C21 DOUB Y N 21 E2A C19 C20 DOUB Y N 22 E2A C21 C20 SING Y N 23 E2A C3 H1 SING N N 24 E2A C3 H2 SING N N 25 E2A C7 H3 SING N N 26 E2A C7 H4 SING N N 27 E2A C7 H5 SING N N 28 E2A C15 H6 SING N N 29 E2A C15 H7 SING N N 30 E2A C15 H8 SING N N 31 E2A C5 H9 SING N N 32 E2A C5 H10 SING N N 33 E2A C6 H11 SING N N 34 E2A C6 H12 SING N N 35 E2A C2 H13 SING N N 36 E2A C17 H14 SING N N 37 E2A C17 H15 SING N N 38 E2A C23 H16 SING N N 39 E2A C22 H17 SING N N 40 E2A C21 H18 SING N N 41 E2A C20 H19 SING N N 42 E2A C19 H20 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor E2A InChI InChI 1.06 "InChI=1S/C17H20O5/c1-17(16(20)21-2)9-8-14(18)13(10-17)15(19)22-11-12-6-4-3-5-7-12/h3-7,13H,8-11H2,1-2H3/t13-,17+/m1/s1" E2A InChIKey InChI 1.06 GCPXSVVUBYVMMX-DYVFJYSZSA-N E2A SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@@]1(C)CCC(=O)[C@@H](C1)C(=O)OCc2ccccc2" E2A SMILES CACTVS 3.385 "COC(=O)[C]1(C)CCC(=O)[CH](C1)C(=O)OCc2ccccc2" E2A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]1(CCC(=O)[C@@H](C1)C(=O)OCc2ccccc2)C(=O)OC" E2A SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CCC(=O)C(C1)C(=O)OCc2ccccc2)C(=O)OC" # _pdbx_chem_comp_identifier.comp_id E2A _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{O}1-methyl ~{O}3-(phenylmethyl) (1~{S},3~{R})-1-methyl-4-oxidanylidene-cyclohexane-1,3-dicarboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site E2A "Create component" 2023-07-18 PDBE E2A "Initial release" 2024-07-24 RCSB E2A "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id E2A _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C3 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #