data_E5N # _chem_comp.id E5N _chem_comp.name "(2~{R})-2-methylpentanedioic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H10 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-02-20 _chem_comp.pdbx_modified_date 2019-01-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 146.141 _chem_comp.one_letter_code ? _chem_comp.three_letter_code E5N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6FEV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal E5N O42 O1 O 0 1 N N N -41.669 -4.377 11.338 -3.808 -0.462 0.223 O42 E5N 1 E5N O41 O2 O 0 1 N N N -42.777 -3.540 9.602 -2.547 1.260 -0.350 O41 E5N 2 E5N C4 C1 C 0 1 N N N -42.037 -3.435 10.609 -2.611 0.117 0.035 C4 E5N 3 E5N C41 C2 C 0 1 N N N -41.405 -2.103 10.992 -1.348 -0.660 0.304 C41 E5N 4 E5N C32 C3 C 0 1 N N N -41.306 -0.998 9.924 -0.134 0.225 0.014 C32 E5N 5 E5N C3 C4 C 0 1 N N N -39.541 -2.452 8.982 2.341 0.343 0.119 C3 E5N 6 E5N O31 O3 O 0 1 N N N -39.645 -3.569 8.436 2.181 1.500 -0.187 O31 E5N 7 E5N O32 O4 O 0 1 N N N -38.669 -2.054 9.790 3.580 -0.136 0.310 O32 E5N 8 E5N C22 C5 C 0 1 N N N -40.147 -0.487 7.790 1.251 -1.729 -0.700 C22 E5N 9 E5N C31 C6 C 0 1 N N R -40.715 -1.600 8.672 1.148 -0.564 0.287 C31 E5N 10 E5N H1 H1 H 0 1 N N N -42.036 -5.191 11.014 -4.589 0.076 0.037 H1 E5N 11 E5N H2 H2 H 0 1 N N N -40.381 -2.316 11.333 -1.329 -0.972 1.348 H2 E5N 12 E5N H3 H3 H 0 1 N N N -41.992 -1.694 11.828 -1.319 -1.540 -0.339 H3 E5N 13 E5N H4 H4 H 0 1 N N N -40.659 -0.186 10.288 -0.153 0.536 -1.031 H4 E5N 14 E5N H5 H5 H 0 1 N N N -42.308 -0.599 9.708 -0.163 1.104 0.656 H5 E5N 15 E5N H6 H6 H 0 1 N N N -38.046 -2.752 9.954 4.313 0.483 0.192 H6 E5N 16 E5N H7 H7 H 0 1 N N N -40.954 0.204 7.506 2.165 -2.290 -0.506 H7 E5N 17 E5N H8 H8 H 0 1 N N N -39.373 0.062 8.346 0.389 -2.384 -0.579 H8 E5N 18 E5N H9 H9 H 0 1 N N N -39.705 -0.927 6.884 1.273 -1.341 -1.719 H9 E5N 19 E5N H10 H10 H 0 1 N N N -41.478 -2.169 8.121 1.127 -0.951 1.305 H10 E5N 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal E5N C22 C31 SING N N 1 E5N O31 C3 DOUB N N 2 E5N C31 C3 SING N N 3 E5N C31 C32 SING N N 4 E5N C3 O32 SING N N 5 E5N O41 C4 DOUB N N 6 E5N C32 C41 SING N N 7 E5N C4 C41 SING N N 8 E5N C4 O42 SING N N 9 E5N O42 H1 SING N N 10 E5N C41 H2 SING N N 11 E5N C41 H3 SING N N 12 E5N C32 H4 SING N N 13 E5N C32 H5 SING N N 14 E5N O32 H6 SING N N 15 E5N C22 H7 SING N N 16 E5N C22 H8 SING N N 17 E5N C22 H9 SING N N 18 E5N C31 H10 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor E5N InChI InChI 1.03 "InChI=1S/C6H10O4/c1-4(6(9)10)2-3-5(7)8/h4H,2-3H2,1H3,(H,7,8)(H,9,10)/t4-/m1/s1" E5N InChIKey InChI 1.03 AQYCMVICBNBXNA-SCSAIBSYSA-N E5N SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCC(O)=O)C(O)=O" E5N SMILES CACTVS 3.385 "C[CH](CCC(O)=O)C(O)=O" E5N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H](CCC(=O)O)C(=O)O" E5N SMILES "OpenEye OEToolkits" 2.0.6 "CC(CCC(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier E5N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-2-methylpentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site E5N "Create component" 2018-02-20 EBI E5N "Initial release" 2019-01-30 RCSB #