data_E8X # _chem_comp.id E8X _chem_comp.name "(2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H23 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-21 _chem_comp.pdbx_modified_date 2021-01-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 245.315 _chem_comp.one_letter_code ? _chem_comp.three_letter_code E8X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6LD0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal E8X C6 C1 C 0 1 N N N -33.861 33.712 -31.342 -1.517 1.968 0.116 C6 E8X 1 E8X C5 C2 C 0 1 N N S -33.806 34.486 -30.057 -1.615 0.540 -0.355 C5 E8X 2 E8X C4 C3 C 0 1 N N R -34.190 33.592 -28.888 -2.896 -0.094 0.195 C4 E8X 3 E8X O4 O1 O 0 1 N N N -33.445 32.371 -28.924 -4.032 0.604 -0.318 O4 E8X 4 E8X C3 C4 C 0 1 N N R -33.939 34.328 -27.576 -2.957 -1.561 -0.238 C3 E8X 5 E8X O3 O2 O 0 1 N N N -34.398 33.523 -26.486 -4.121 -2.175 0.318 O3 E8X 6 E8X C2 C5 C 0 1 N N N -34.673 35.668 -27.530 -1.707 -2.289 0.262 C2 E8X 7 E8X C7 C6 C 0 1 N N S -34.792 35.646 -30.051 -0.404 -0.249 0.149 C7 E8X 8 E8X C8 C7 C 0 1 N N N -34.643 36.589 -31.241 0.877 0.369 -0.415 C8 E8X 9 E8X C9 C8 C 0 1 N N N -36.003 37.167 -31.613 2.092 -0.340 0.187 C9 E8X 10 E8X N N1 N 0 1 N N N -34.611 36.372 -28.804 -0.509 -1.645 -0.292 N E8X 11 E8X O61 O3 O 0 1 N N N -35.004 33.584 -32.012 -0.576 2.319 0.787 O61 E8X 12 E8X O62 O4 O 0 1 N N N -32.854 33.182 -31.789 -2.474 2.850 -0.213 O62 E8X 13 E8X C10 C9 C 0 1 N N N -35.882 38.396 -32.507 3.374 0.278 -0.377 C10 E8X 14 E8X C11 C10 C 0 1 N N N -37.185 38.624 -33.269 4.589 -0.431 0.224 C11 E8X 15 E8X C12 C11 C 0 1 N N N -37.315 40.072 -33.732 5.870 0.187 -0.340 C12 E8X 16 E8X C13 C12 C 0 1 N N N -36.220 40.434 -34.714 7.086 -0.522 0.262 C13 E8X 17 E8X H1 H1 H 0 1 N N N -32.788 34.872 -29.902 -1.636 0.517 -1.445 H1 E8X 18 E8X H2 H2 H 0 1 N N N -35.265 33.370 -28.960 -2.892 -0.036 1.284 H2 E8X 19 E8X H3 H3 H 0 1 N N N -33.696 31.825 -28.189 -4.880 0.255 -0.010 H3 E8X 20 E8X H4 H4 H 0 1 N N N -32.859 34.515 -27.477 -3.000 -1.617 -1.326 H4 E8X 21 E8X H5 H5 H 0 1 N N N -34.243 33.979 -25.667 -4.224 -3.107 0.084 H5 E8X 22 E8X H6 H6 H 0 1 N N N -34.213 36.298 -26.754 -1.672 -2.244 1.351 H6 E8X 23 E8X H7 H7 H 0 1 N N N -35.728 35.486 -27.277 -1.741 -3.330 -0.057 H7 E8X 24 E8X H8 H8 H 0 1 N N N -35.809 35.228 -30.075 -0.375 -0.213 1.238 H8 E8X 25 E8X H9 H9 H 0 1 N N N -34.235 36.034 -32.098 0.889 0.255 -1.499 H9 E8X 26 E8X H10 H10 H 0 1 N N N -33.958 37.408 -30.975 0.912 1.429 -0.161 H10 E8X 27 E8X H11 H11 H 0 1 N N N -36.532 37.450 -30.691 2.080 -0.225 1.270 H11 E8X 28 E8X H12 H12 H 0 1 N N N -36.581 36.397 -32.145 2.058 -1.399 -0.067 H12 E8X 29 E8X H13 H13 H 0 1 N N N -33.710 36.804 -28.851 -0.499 -1.708 -1.299 H13 E8X 30 E8X H15 H15 H 0 1 N N N -33.065 32.733 -32.599 -2.367 3.755 0.112 H15 E8X 31 E8X H16 H16 H 0 1 N N N -35.063 38.244 -33.225 3.386 0.163 -1.461 H16 E8X 32 E8X H17 H17 H 0 1 N N N -35.665 39.277 -31.886 3.408 1.337 -0.123 H17 E8X 33 E8X H18 H18 H 0 1 N N N -38.032 38.382 -32.610 4.577 -0.316 1.308 H18 E8X 34 E8X H19 H19 H 0 1 N N N -37.205 37.964 -34.149 4.554 -1.490 -0.030 H19 E8X 35 E8X H20 H20 H 0 1 N N N -37.246 40.736 -32.858 5.882 0.072 -1.424 H20 E8X 36 E8X H21 H21 H 0 1 N N N -38.292 40.207 -34.219 5.905 1.247 -0.086 H21 E8X 37 E8X H22 H22 H 0 1 N N N -36.340 41.481 -35.029 7.998 -0.082 -0.140 H22 E8X 38 E8X H23 H23 H 0 1 N N N -35.239 40.306 -34.233 7.074 -0.407 1.345 H23 E8X 39 E8X H24 H24 H 0 1 N N N -36.285 39.777 -35.594 7.051 -1.581 0.008 H24 E8X 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal E8X C13 C12 SING N N 1 E8X C12 C11 SING N N 2 E8X C11 C10 SING N N 3 E8X C10 C9 SING N N 4 E8X O61 C6 DOUB N N 5 E8X O62 C6 SING N N 6 E8X C9 C8 SING N N 7 E8X C6 C5 SING N N 8 E8X C8 C7 SING N N 9 E8X C5 C7 SING N N 10 E8X C5 C4 SING N N 11 E8X C7 N SING N N 12 E8X O4 C4 SING N N 13 E8X C4 C3 SING N N 14 E8X N C2 SING N N 15 E8X C3 C2 SING N N 16 E8X C3 O3 SING N N 17 E8X C5 H1 SING N N 18 E8X C4 H2 SING N N 19 E8X O4 H3 SING N N 20 E8X C3 H4 SING N N 21 E8X O3 H5 SING N N 22 E8X C2 H6 SING N N 23 E8X C2 H7 SING N N 24 E8X C7 H8 SING N N 25 E8X C8 H9 SING N N 26 E8X C8 H10 SING N N 27 E8X C9 H11 SING N N 28 E8X C9 H12 SING N N 29 E8X N H13 SING N N 30 E8X O62 H15 SING N N 31 E8X C10 H16 SING N N 32 E8X C10 H17 SING N N 33 E8X C11 H18 SING N N 34 E8X C11 H19 SING N N 35 E8X C12 H20 SING N N 36 E8X C12 H21 SING N N 37 E8X C13 H22 SING N N 38 E8X C13 H23 SING N N 39 E8X C13 H24 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor E8X InChI InChI 1.03 "InChI=1S/C12H23NO4/c1-2-3-4-5-6-8-10(12(16)17)11(15)9(14)7-13-8/h8-11,13-15H,2-7H2,1H3,(H,16,17)/t8-,9+,10-,11-/m0/s1" E8X InChIKey InChI 1.03 RRWNAAJMVJWKAM-VLEAKVRGSA-N E8X SMILES_CANONICAL CACTVS 3.385 "CCCCCC[C@@H]1NC[C@@H](O)[C@H](O)[C@H]1C(O)=O" E8X SMILES CACTVS 3.385 "CCCCCC[CH]1NC[CH](O)[CH](O)[CH]1C(O)=O" E8X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC[C@H]1[C@@H]([C@H]([C@@H](CN1)O)O)C(=O)O" E8X SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCC1C(C(C(CN1)O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id E8X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site E8X "Create component" 2019-11-21 PDBJ E8X "Initial release" 2021-01-27 RCSB ##