data_EBT # _chem_comp.id EBT _chem_comp.name "N-[(2R,3R)-3-amino-2-hydroxy-4-phenylbutanoyl]-L-leucine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H24 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Epibestatin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-03-30 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 308.373 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EBT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3M50 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EBT C C C 0 1 N N N -1.356 -33.601 8.595 -4.104 -0.771 -0.412 C EBT 1 EBT N N N 0 1 N N N -0.715 -35.970 9.110 -1.718 -0.335 -0.333 N EBT 2 EBT O O O 0 1 N N N -1.071 -33.918 7.416 -3.808 -1.715 -1.106 O EBT 3 EBT CA CA C 0 1 N N S -1.071 -34.642 9.691 -3.027 0.137 0.125 CA EBT 4 EBT CB CB C 0 1 N N N 0.015 -34.084 10.637 -3.262 1.561 -0.382 CB EBT 5 EBT CG CG C 0 1 N N N -0.606 -32.893 11.409 -2.245 2.506 0.262 CG EBT 6 EBT OAA OAA O 0 1 N N N -2.295 -39.078 8.130 0.587 -3.013 0.583 OAA EBT 7 EBT OAB OAB O 0 1 N N N -2.841 -36.791 9.109 -1.527 -1.708 1.399 OAB EBT 8 EBT NAF NAF N 0 1 N N N -0.424 -38.578 10.641 1.008 0.334 -0.933 NAF EBT 9 EBT CAJ CAJ C 0 1 N N R -0.121 -38.919 9.241 1.325 -0.804 -0.060 CAJ EBT 10 EBT CAK CAK C 0 1 N N R -1.144 -38.242 8.300 0.224 -1.859 -0.176 CAK EBT 11 EBT CAL CAL C 0 1 N N N 1.322 -38.488 8.923 2.663 -1.414 -0.482 CAL EBT 12 EBT CAM CAM C 0 1 N N N -1.640 -36.919 8.880 -1.070 -1.296 0.354 CAM EBT 13 EBT CAP CAP C 0 1 Y N N 2.216 -39.673 8.509 3.767 -0.414 -0.251 CAP EBT 14 EBT CAR CAR C 0 1 Y N N 2.117 -40.218 7.230 4.428 -0.383 0.963 CAR EBT 15 EBT CAS CAS C 0 1 Y N N 3.135 -40.198 9.410 4.122 0.468 -1.254 CAS EBT 16 EBT CAT CAT C 0 1 Y N N 2.922 -41.280 6.842 5.440 0.535 1.175 CAT EBT 17 EBT CAU CAU C 0 1 Y N N 3.938 -41.262 9.019 5.134 1.385 -1.042 CAU EBT 18 EBT CAV CAV C 0 1 Y N N 3.838 -41.803 7.739 5.792 1.420 0.173 CAV EBT 19 EBT CD1 CD1 C 0 1 N N N -0.554 -33.078 12.945 -2.398 3.905 -0.337 CD1 EBT 20 EBT CD2 CD2 C 0 1 N N N 0.002 -31.551 10.960 -2.489 2.567 1.771 CD2 EBT 21 EBT OXT OXT O 0 1 N N N -1.837 -32.501 8.969 -5.392 -0.528 -0.124 OXT EBT 22 EBT HN HN H 0 1 N N N 0.241 -36.160 8.885 -1.318 0.045 -1.131 HN EBT 23 EBT HA HA H 0 1 N N N -1.982 -34.821 10.281 -3.056 0.129 1.214 HA EBT 24 EBT HB HB H 0 1 N N N 0.340 -34.864 11.342 -3.146 1.586 -1.465 HB EBT 25 EBT HBA HBA H 0 1 N N N 0.886 -33.746 10.056 -4.271 1.879 -0.117 HBA EBT 26 EBT HG HG H 0 1 N N N -1.674 -32.871 11.148 -1.237 2.137 0.071 HG EBT 27 EBT HOAA HOAA H 0 0 N N N -3.070 -38.613 8.421 0.717 -2.839 1.526 HOAA EBT 28 EBT HNAF HNAF H 0 0 N N N 0.241 -39.019 11.243 0.828 0.026 -1.877 HNAF EBT 29 EBT HNAA HNAA H 0 0 N N N -0.376 -37.586 10.760 0.229 0.863 -0.571 HNAA EBT 30 EBT HAJ HAJ H 0 1 N N N -0.201 -40.005 9.086 1.392 -0.461 0.973 HAJ EBT 31 EBT HAK HAK H 0 1 N N N -0.630 -38.071 7.342 0.097 -2.137 -1.223 HAK EBT 32 EBT HAL HAL H 0 1 N N N 1.295 -37.766 8.094 2.856 -2.310 0.108 HAL EBT 33 EBT HALA HALA H 0 0 N N N 1.753 -38.024 9.823 2.625 -1.676 -1.539 HALA EBT 34 EBT HAR HAR H 0 1 N N N 1.403 -39.808 6.531 4.153 -1.074 1.746 HAR EBT 35 EBT HAS HAS H 0 1 N N N 3.224 -39.783 10.403 3.609 0.440 -2.204 HAS EBT 36 EBT HAT HAT H 0 1 N N N 2.835 -41.695 5.849 5.956 0.560 2.124 HAT EBT 37 EBT HAU HAU H 0 1 N N N 4.650 -41.676 9.717 5.412 2.073 -1.827 HAU EBT 38 EBT HAV HAV H 0 1 N N N 4.472 -42.627 7.448 6.582 2.137 0.339 HAV EBT 39 EBT HD1 HD1 H 0 1 N N N -1.008 -32.204 13.436 -3.406 4.273 -0.147 HD1 EBT 40 EBT HD1A HD1A H 0 0 N N N -1.111 -33.985 13.224 -1.673 4.578 0.121 HD1A EBT 41 EBT HD1B HD1B H 0 0 N N N 0.493 -33.177 13.267 -2.224 3.861 -1.413 HD1B EBT 42 EBT HD2 HD2 H 0 1 N N N -0.461 -30.730 11.527 -2.380 1.570 2.197 HD2 EBT 43 EBT HD2A HD2A H 0 0 N N N 1.086 -31.559 11.146 -1.764 3.240 2.229 HD2A EBT 44 EBT HD2B HD2B H 0 0 N N N -0.185 -31.405 9.886 -3.497 2.935 1.961 HD2B EBT 45 EBT HOXT HOXT H 0 0 N N N -1.956 -31.934 8.216 -6.047 -1.136 -0.494 HOXT EBT 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EBT C O DOUB N N 1 EBT C CA SING N N 2 EBT C OXT SING N N 3 EBT N CA SING N N 4 EBT N CAM SING N N 5 EBT CA CB SING N N 6 EBT CB CG SING N N 7 EBT CG CD1 SING N N 8 EBT CG CD2 SING N N 9 EBT OAA CAK SING N N 10 EBT OAB CAM DOUB N N 11 EBT NAF CAJ SING N N 12 EBT CAJ CAK SING N N 13 EBT CAJ CAL SING N N 14 EBT CAK CAM SING N N 15 EBT CAL CAP SING N N 16 EBT CAP CAR DOUB Y N 17 EBT CAP CAS SING Y N 18 EBT CAR CAT SING Y N 19 EBT CAS CAU DOUB Y N 20 EBT CAT CAV DOUB Y N 21 EBT CAU CAV SING Y N 22 EBT N HN SING N N 23 EBT CA HA SING N N 24 EBT CB HB SING N N 25 EBT CB HBA SING N N 26 EBT CG HG SING N N 27 EBT OAA HOAA SING N N 28 EBT NAF HNAF SING N N 29 EBT NAF HNAA SING N N 30 EBT CAJ HAJ SING N N 31 EBT CAK HAK SING N N 32 EBT CAL HAL SING N N 33 EBT CAL HALA SING N N 34 EBT CAR HAR SING N N 35 EBT CAS HAS SING N N 36 EBT CAT HAT SING N N 37 EBT CAU HAU SING N N 38 EBT CAV HAV SING N N 39 EBT CD1 HD1 SING N N 40 EBT CD1 HD1A SING N N 41 EBT CD1 HD1B SING N N 42 EBT CD2 HD2 SING N N 43 EBT CD2 HD2A SING N N 44 EBT CD2 HD2B SING N N 45 EBT OXT HOXT SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EBT SMILES ACDLabs 12.01 "O=C(O)C(NC(=O)C(O)C(N)Cc1ccccc1)CC(C)C" EBT SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(=O)[C@H](O)[C@H](N)Cc1ccccc1)C(O)=O" EBT SMILES CACTVS 3.370 "CC(C)C[CH](NC(=O)[CH](O)[CH](N)Cc1ccccc1)C(O)=O" EBT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)C[C@@H](C(=O)O)NC(=O)[C@@H]([C@@H](Cc1ccccc1)N)O" EBT SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)CC(C(=O)O)NC(=O)C(C(Cc1ccccc1)N)O" EBT InChI InChI 1.03 "InChI=1S/C16H24N2O4/c1-10(2)8-13(16(21)22)18-15(20)14(19)12(17)9-11-6-4-3-5-7-11/h3-7,10,12-14,19H,8-9,17H2,1-2H3,(H,18,20)(H,21,22)/t12-,13+,14-/m1/s1" EBT InChIKey InChI 1.03 VGGGPCQERPFHOB-HZSPNIEDSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EBT "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2R,3R)-3-amino-2-hydroxy-4-phenylbutanoyl]-L-leucine" EBT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-[[(2R,3R)-3-azanyl-2-hydroxy-4-phenyl-butanoyl]amino]-4-methyl-pentanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EBT "Create component" 2010-03-30 PDBJ EBT "Modify aromatic_flag" 2011-06-04 RCSB EBT "Modify descriptor" 2011-06-04 RCSB EBT "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EBT _pdbx_chem_comp_synonyms.name Epibestatin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##