data_EC6 # _chem_comp.id EC6 _chem_comp.name "N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H54 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Double bound form of enone carmaphycin analogue 6; (S)-N1-((S,Z)-2,6-dimethyl-5-oxooct-6-en-4-yl)-2-((S)-2-hexanamido-3-methylbutanamido)-N5,N5-dimethylpentanediamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-09-06 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 526.752 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EC6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4LTC _chem_comp.pdbx_subcomponent_list "6NA VAL QMM 27W" _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EC6 C27 C27 C 0 1 N N N 12.438 -136.087 22.500 -5.882 0.460 0.318 CA 6NA 1 EC6 C1 C1 C 0 1 N N N 11.795 -137.068 21.533 -4.607 0.896 -0.357 C 6NA 2 EC6 O1 O1 O 0 1 N N N 12.489 -137.994 21.167 -4.611 1.178 -1.536 O 6NA 3 EC6 C28 C28 C 0 1 N N N 12.452 -136.617 23.964 -7.024 0.459 -0.701 CB 6NA 4 EC6 C29 C29 C 0 1 N N N 13.688 -136.139 24.774 -8.318 0.016 -0.017 CG 6NA 5 EC6 C30 C30 C 0 1 N N N 13.733 -136.823 26.174 -9.460 0.016 -1.036 CD 6NA 6 EC6 C31 C31 C 0 1 N N N 13.388 -135.848 27.332 -10.754 -0.427 -0.352 C6 6NA 7 EC6 N1 N1 N 0 1 N N N 10.881 -136.494 20.714 -3.463 0.972 0.351 N VAL 8 EC6 C2 C2 C 0 1 N N S 10.163 -137.361 19.757 -2.223 1.396 -0.304 CA VAL 9 EC6 C5 C5 C 0 1 N N N 10.772 -137.174 18.370 -1.041 0.838 0.447 C VAL 10 EC6 O3 O3 O 0 1 N N N 11.502 -136.182 18.300 -1.174 0.463 1.593 O VAL 11 EC6 C3 C3 C 0 1 N N N 8.612 -137.089 19.838 -2.147 2.924 -0.313 CB VAL 12 EC6 C26 C26 C 0 1 N N N 8.059 -135.987 18.879 -3.263 3.485 -1.197 CG1 VAL 13 EC6 C4 C4 C 0 1 N N N 7.777 -138.386 19.647 -2.314 3.451 1.114 CG2 VAL 14 EC6 C10 C10 C 0 1 N N N 11.183 -138.227 15.142 2.582 0.662 -0.002 C QMM 15 EC6 C9 C9 C 0 1 N N N 15.088 -138.048 17.403 -0.080 -3.454 0.741 CD QMM 16 EC6 C8 C8 C 0 1 N N N 14.037 -139.097 17.699 -0.027 -1.965 0.966 CG QMM 17 EC6 N2 N2 N 0 1 N N N 10.978 -138.246 17.565 0.162 0.756 -0.154 N QMM 18 EC6 O7 O7 O 0 1 N N N 15.623 -138.194 16.318 0.802 -4.005 0.116 OE1 QMM 19 EC6 N5 N5 N 0 1 N N N 15.800 -137.499 18.414 -1.107 -4.174 1.233 NE2 QMM 20 EC6 C24 C24 C 0 1 N N N 15.106 -137.168 19.658 -1.158 -5.622 1.014 CH1 QMM 21 EC6 C25 C25 C 0 1 N N N 16.932 -136.650 18.023 -2.172 -3.510 1.988 CH2 QMM 22 EC6 C6 C6 C 0 1 N N S 11.936 -138.173 16.455 1.285 0.118 0.538 CA QMM 23 EC6 C7 C7 C 0 1 N N N 13.011 -139.304 16.545 1.231 -1.394 0.309 CB QMM 24 EC6 O2 O2 O 0 1 N N N 9.975 -138.120 15.209 2.570 1.500 -0.878 O QMM 25 EC6 N3 N3 N 0 1 N N N 11.872 -137.754 14.075 3.756 0.216 0.489 N3 27W 26 EC6 C11 C11 C 0 1 N N S 11.144 -137.445 12.830 5.017 0.745 -0.036 C11 27W 27 EC6 C12 C12 C 0 1 N N N 11.054 -135.868 12.774 5.715 1.568 1.049 C12 27W 28 EC6 C13 C13 C 0 1 N N N 9.655 -135.165 12.716 4.868 2.798 1.381 C13 27W 29 EC6 C15 C15 C 0 1 N N N 8.654 -135.650 13.812 5.502 3.554 2.551 C15 27W 30 EC6 C14 C14 C 0 1 N N N 9.836 -133.621 12.867 4.799 3.715 0.159 C14 27W 31 EC6 C16 C16 C 0 1 N N S 11.844 -138.120 11.573 5.921 -0.415 -0.456 C16 27W 32 EC6 O6 O6 O 0 1 N N N 13.244 -137.757 11.621 6.251 -1.202 0.690 O6 27W 33 EC6 C17 C17 C 0 1 N N R 11.747 -139.707 11.337 5.189 -1.286 -1.480 C17 27W 34 EC6 C23 C23 C 0 1 N N N 10.558 -140.368 12.119 6.056 -2.497 -1.831 C23 27W 35 EC6 C18 C18 C 0 1 N N N 13.011 -140.557 11.744 4.918 -0.469 -2.744 C18 27W 36 EC6 C44 C44 C 0 1 N N N 13.464 -140.651 13.224 4.079 -1.299 -3.718 C44 27W 37 EC6 H10 H10 H 0 1 N N N 13.475 -135.905 22.181 -5.755 -0.545 0.721 HAC1 6NA 38 EC6 H11 H11 H 0 1 N N N 11.874 -135.143 22.472 -6.119 1.149 1.128 HAC2 6NA 39 EC6 H12 H12 H 0 1 N N N 11.543 -136.264 24.473 -7.151 1.464 -1.105 HBC1 6NA 40 EC6 H13 H13 H 0 1 N N N 12.455 -137.717 23.938 -6.787 -0.231 -1.512 HBC2 6NA 41 EC6 H14 H14 H 0 1 N N N 14.603 -136.394 24.219 -8.191 -0.988 0.387 HGC1 6NA 42 EC6 H15 H15 H 0 1 N N N 13.632 -135.049 24.907 -8.555 0.706 0.793 HGC2 6NA 43 EC6 H16 H16 H 0 1 N N N 13.009 -137.651 26.184 -9.587 1.020 -1.440 HDC1 6NA 44 EC6 H17 H17 H 0 1 N N N 14.746 -137.220 26.339 -9.223 -0.674 -1.846 HDC2 6NA 45 EC6 H18 H18 H 0 1 N N N 13.436 -136.385 28.291 -11.567 -0.428 -1.078 H6C1 6NA 46 EC6 H19 H19 H 0 1 N N N 14.110 -135.018 27.340 -10.627 -1.432 0.052 H6C2 6NA 47 EC6 H20 H20 H 0 1 N N N 12.373 -135.449 27.185 -10.991 0.263 0.459 H6C3 6NA 48 EC6 H9 H9 H 0 1 N N N 10.698 -135.512 20.756 -3.460 0.746 1.294 H VAL 49 EC6 H1 H1 H 0 1 N N N 10.323 -138.408 20.053 -2.209 1.025 -1.329 HA VAL 50 EC6 H2 H2 H 0 1 N N N 8.414 -136.738 20.862 -1.180 3.237 -0.705 HB VAL 51 EC6 H3 H3 H 0 1 N N N 8.643 -135.063 19.006 -4.229 3.273 -0.741 HG11 VAL 52 EC6 H4 H4 H 0 1 N N N 8.141 -136.333 17.838 -3.137 4.562 -1.300 HG12 VAL 53 EC6 H5 H5 H 0 1 N N N 7.004 -135.789 19.118 -3.215 3.018 -2.181 HG13 VAL 54 EC6 H6 H6 H 0 1 N N N 8.158 -139.170 20.318 -1.519 3.051 1.744 HG21 VAL 55 EC6 H7 H7 H 0 1 N N N 6.722 -138.181 19.884 -2.260 4.539 1.108 HG22 VAL 56 EC6 H8 H8 H 0 1 N N N 7.859 -138.725 18.604 -3.281 3.137 1.506 HG23 VAL 57 EC6 H25 H25 H 0 1 N N N 13.487 -138.791 18.601 -0.910 -1.500 0.527 HG1 QMM 58 EC6 H26 H26 H 0 1 N N N 14.546 -140.054 17.886 -0.003 -1.760 2.036 HG2 QMM 59 EC6 H21 H21 H 0 1 N N N 10.473 -139.093 17.729 0.285 1.120 -1.045 H QMM 60 EC6 H30 H30 H 0 1 N N N 15.820 -136.734 20.373 -0.276 -6.088 1.453 HH1 QMM 61 EC6 H31 H31 H 0 1 N N N 14.308 -136.441 19.450 -2.055 -6.029 1.482 HH1A QMM 62 EC6 H32 H32 H 0 1 N N N 14.668 -138.081 20.087 -1.183 -5.827 -0.056 HH1B QMM 63 EC6 H27 H27 H 0 1 N N N 17.430 -136.264 18.925 -2.960 -3.194 1.304 HH2 QMM 64 EC6 H28 H28 H 0 1 N N N 17.648 -137.242 17.434 -2.584 -4.202 2.722 HH2A QMM 65 EC6 H29 H29 H 0 1 N N N 16.566 -135.808 17.417 -1.765 -2.638 2.500 HH2B QMM 66 EC6 H22 H22 H 0 1 N N N 12.464 -137.209 16.507 1.219 0.326 1.605 HA QMM 67 EC6 H23 H23 H 0 1 N N N 12.495 -140.262 16.706 2.113 -1.860 0.748 HB2 QMM 68 EC6 H24 H24 H 0 1 N N N 13.561 -139.338 15.593 1.207 -1.599 -0.762 HB3 QMM 69 EC6 H33 H33 H 0 1 N N N 12.861 -137.616 14.131 3.765 -0.454 1.190 H33 27W 70 EC6 H34 H34 H 0 1 N N N 10.120 -137.841 12.899 4.814 1.379 -0.899 H34 27W 71 EC6 H35 H35 H 0 1 N N N 11.607 -135.550 11.878 5.838 0.959 1.944 H35 27W 72 EC6 H36 H36 H 0 1 N N N 11.563 -135.489 13.672 6.694 1.888 0.689 H36 27W 73 EC6 H37 H37 H 0 1 N N N 9.210 -135.365 11.730 3.861 2.482 1.656 H37 27W 74 EC6 H38 H38 H 0 1 N N N 7.701 -135.111 13.703 6.508 3.869 2.276 H38 27W 75 EC6 H39 H39 H 0 1 N N N 8.480 -136.730 13.697 4.898 4.430 2.787 H39 27W 76 EC6 H40 H40 H 0 1 N N N 9.076 -135.451 14.808 5.551 2.900 3.422 H40 27W 77 EC6 H41 H41 H 0 1 N N N 8.852 -133.130 12.826 5.805 4.031 -0.116 H41 27W 78 EC6 H42 H42 H 0 1 N N N 10.315 -133.401 13.832 4.347 3.177 -0.675 H42 27W 79 EC6 H43 H43 H 0 1 N N N 10.468 -133.244 12.049 4.195 4.591 0.395 H43 27W 80 EC6 H44 H44 H 0 1 N N N 11.401 -137.650 10.682 6.834 -0.021 -0.902 H44 27W 81 EC6 H45 H45 H 0 1 N N N 13.324 -136.821 11.760 5.484 -1.585 1.138 H45 27W 82 EC6 H46 H46 H 0 1 N N N 11.571 -139.867 10.263 4.244 -1.626 -1.057 H46 27W 83 EC6 H47 H47 H 0 1 N N N 10.543 -141.450 11.919 6.208 -3.106 -0.939 H47 27W 84 EC6 H48 H48 H 0 1 N N N 10.688 -140.197 13.198 5.556 -3.092 -2.596 H48 27W 85 EC6 H49 H49 H 0 1 N N N 9.609 -139.921 11.789 7.021 -2.157 -2.207 H49 27W 86 EC6 H50 H50 H 0 1 N N N 12.817 -141.587 11.410 4.377 0.440 -2.481 H50 27W 87 EC6 H51 H51 H 0 1 N N N 13.861 -140.143 11.182 5.865 -0.204 -3.215 H51 27W 88 EC6 H52 H52 H 0 1 N N N 14.359 -141.287 13.294 3.886 -0.717 -4.619 H52 27W 89 EC6 H53 H53 H 0 1 N N N 13.699 -139.644 13.600 4.620 -2.207 -3.981 H53 27W 90 EC6 H54 H54 H 0 1 N N N 12.655 -141.088 13.828 3.132 -1.564 -3.246 H54 27W 91 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EC6 C17 C16 SING N N 1 EC6 C17 C18 SING N N 2 EC6 C17 C23 SING N N 3 EC6 C16 O6 SING N N 4 EC6 C16 C11 SING N N 5 EC6 C18 C44 SING N N 6 EC6 C13 C12 SING N N 7 EC6 C13 C14 SING N N 8 EC6 C13 C15 SING N N 9 EC6 C12 C11 SING N N 10 EC6 C11 N3 SING N N 11 EC6 N3 C10 SING N N 12 EC6 C10 O2 DOUB N N 13 EC6 C10 C6 SING N N 14 EC6 O7 C9 DOUB N N 15 EC6 C6 C7 SING N N 16 EC6 C6 N2 SING N N 17 EC6 C7 C8 SING N N 18 EC6 C9 C8 SING N N 19 EC6 C9 N5 SING N N 20 EC6 N2 C5 SING N N 21 EC6 C25 N5 SING N N 22 EC6 O3 C5 DOUB N N 23 EC6 C5 C2 SING N N 24 EC6 N5 C24 SING N N 25 EC6 C26 C3 SING N N 26 EC6 C4 C3 SING N N 27 EC6 C2 C3 SING N N 28 EC6 C2 N1 SING N N 29 EC6 N1 C1 SING N N 30 EC6 O1 C1 DOUB N N 31 EC6 C1 C27 SING N N 32 EC6 C27 C28 SING N N 33 EC6 C28 C29 SING N N 34 EC6 C29 C30 SING N N 35 EC6 C30 C31 SING N N 36 EC6 C2 H1 SING N N 37 EC6 C3 H2 SING N N 38 EC6 C26 H3 SING N N 39 EC6 C26 H4 SING N N 40 EC6 C26 H5 SING N N 41 EC6 C4 H6 SING N N 42 EC6 C4 H7 SING N N 43 EC6 C4 H8 SING N N 44 EC6 N1 H9 SING N N 45 EC6 C27 H10 SING N N 46 EC6 C27 H11 SING N N 47 EC6 C28 H12 SING N N 48 EC6 C28 H13 SING N N 49 EC6 C29 H14 SING N N 50 EC6 C29 H15 SING N N 51 EC6 C30 H16 SING N N 52 EC6 C30 H17 SING N N 53 EC6 C31 H18 SING N N 54 EC6 C31 H19 SING N N 55 EC6 C31 H20 SING N N 56 EC6 N2 H21 SING N N 57 EC6 C6 H22 SING N N 58 EC6 C7 H23 SING N N 59 EC6 C7 H24 SING N N 60 EC6 C8 H25 SING N N 61 EC6 C8 H26 SING N N 62 EC6 C25 H27 SING N N 63 EC6 C25 H28 SING N N 64 EC6 C25 H29 SING N N 65 EC6 C24 H30 SING N N 66 EC6 C24 H31 SING N N 67 EC6 C24 H32 SING N N 68 EC6 N3 H33 SING N N 69 EC6 C11 H34 SING N N 70 EC6 C12 H35 SING N N 71 EC6 C12 H36 SING N N 72 EC6 C13 H37 SING N N 73 EC6 C15 H38 SING N N 74 EC6 C15 H39 SING N N 75 EC6 C15 H40 SING N N 76 EC6 C14 H41 SING N N 77 EC6 C14 H42 SING N N 78 EC6 C14 H43 SING N N 79 EC6 C16 H44 SING N N 80 EC6 O6 H45 SING N N 81 EC6 C17 H46 SING N N 82 EC6 C23 H47 SING N N 83 EC6 C23 H48 SING N N 84 EC6 C23 H49 SING N N 85 EC6 C18 H50 SING N N 86 EC6 C18 H51 SING N N 87 EC6 C44 H52 SING N N 88 EC6 C44 H53 SING N N 89 EC6 C44 H54 SING N N 90 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EC6 SMILES ACDLabs 12.01 "O=C(NC(C(O)C(CC)C)CC(C)C)C(NC(=O)C(NC(=O)CCCCC)C(C)C)CCC(=O)N(C)C" EC6 InChI InChI 1.03 "InChI=1S/C28H54N4O5/c1-10-12-13-14-23(33)31-25(19(5)6)28(37)29-21(15-16-24(34)32(8)9)27(36)30-22(17-18(3)4)26(35)20(7)11-2/h18-22,25-26,35H,10-17H2,1-9H3,(H,29,37)(H,30,36)(H,31,33)/t20-,21+,22+,25+,26+/m1/s1" EC6 InChIKey InChI 1.03 BFKSFYOCNVYLSG-DGTHGUPJSA-N EC6 SMILES_CANONICAL CACTVS 3.385 "CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(=O)N(C)C)C(=O)N[C@@H](CC(C)C)[C@@H](O)[C@H](C)CC" EC6 SMILES CACTVS 3.385 "CCCCCC(=O)N[CH](C(C)C)C(=O)N[CH](CCC(=O)N(C)C)C(=O)N[CH](CC(C)C)[CH](O)[CH](C)CC" EC6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(=O)N(C)C)C(=O)N[C@@H](CC(C)C)[C@H]([C@H](C)CC)O" EC6 SMILES "OpenEye OEToolkits" 1.7.6 "CCCCCC(=O)NC(C(C)C)C(=O)NC(CCC(=O)N(C)C)C(=O)NC(CC(C)C)C(C(C)CC)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EC6 "SYSTEMATIC NAME" ACDLabs 12.01 "N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide" EC6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-N-[(4S,5S,6R)-2,6-dimethyl-5-oxidanyl-octan-4-yl]-2-[[(2S)-2-(hexanoylamino)-3-methyl-butanoyl]amino]-N',N'-dimethyl-pentanediamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EC6 "Create component" 2013-09-06 RCSB EC6 "Initial release" 2014-07-02 RCSB EC6 "Modify synonyms" 2020-05-27 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 EC6 "Double bound form of enone carmaphycin analogue 6" ? ? 2 EC6 "(S)-N1-((S,Z)-2,6-dimethyl-5-oxooct-6-en-4-yl)-2-((S)-2-hexanamido-3-methylbutanamido)-N5,N5-dimethylpentanediamide" ? ? #