data_EEQ # _chem_comp.id EEQ _chem_comp.name "2-deoxy-2-[(fluoroacetyl)amino]-alpha-D-galactopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H14 F N O6" _chem_comp.mon_nstd_parent_comp_id A2G _chem_comp.pdbx_synonyms ;2-fluoranyl-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide; 2-deoxy-2-[(fluoroacetyl)amino]-alpha-D-galactose; 2-deoxy-2-[(fluoroacetyl)amino]-D-galactose; 2-deoxy-2-[(fluoroacetyl)amino]-galactose ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-03-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 239.198 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EEQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6FZR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 EEQ "2-fluoranyl-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide" PDB ? 2 EEQ "2-deoxy-2-[(fluoroacetyl)amino]-alpha-D-galactose" PDB ? 3 EEQ "2-deoxy-2-[(fluoroacetyl)amino]-D-galactose" PDB ? 4 EEQ "2-deoxy-2-[(fluoroacetyl)amino]-galactose" PDB ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EEQ C8 CME C 0 1 N N N N N N -22.458 14.634 -3.887 4.150 -0.152 0.456 C8 EEQ 1 EEQ F23 F23 F 0 1 N N N N N N -23.067 13.706 -4.130 5.077 -0.589 -0.497 F23 EEQ 2 EEQ C7 C2N C 0 1 N N N N N N -21.914 14.477 -2.499 2.773 -0.133 -0.156 C7 EEQ 3 EEQ O7 O2N O 0 1 N N N N N N -22.665 14.359 -1.544 2.618 -0.468 -1.311 O7 EEQ 4 EEQ N2 N2 N 0 1 N N N N N N -20.590 14.490 -2.449 1.714 0.256 0.581 N2 EEQ 5 EEQ C2 C2 C 0 1 N N R N N N -19.846 14.315 -1.223 0.375 0.275 -0.014 C2 EEQ 6 EEQ C1 C1 C 0 1 N N S N N N -19.358 12.882 -1.062 -0.251 -1.118 0.091 C1 EEQ 7 EEQ O5 O5 O 0 1 N N N N N N -18.844 12.816 0.264 -1.578 -1.084 -0.437 O5 EEQ 8 EEQ C5 C5 C 0 1 N N R N N N -17.664 13.534 0.188 -2.459 -0.197 0.256 C5 EEQ 9 EEQ C6 C6 C 0 1 N N N N N N -16.740 13.325 1.390 -3.851 -0.263 -0.375 C6 EEQ 10 EEQ O6 O6 O 0 1 N N N N N N -16.459 11.949 1.631 -4.400 -1.569 -0.182 O6 EEQ 11 EEQ C4 C4 C 0 1 N N R N N N -17.980 15.012 0.019 -1.922 1.234 0.158 C4 EEQ 12 EEQ O4 O4 O 0 1 N N N N N N -18.823 15.510 1.048 -1.891 1.639 -1.212 O4 EEQ 13 EEQ C3 C3 C 0 1 N N R N N N -18.667 15.181 -1.277 -0.505 1.279 0.737 C3 EEQ 14 EEQ O3 O3 O 0 1 N N N N N N -19.080 16.489 -1.451 0.033 2.594 0.583 O3 EEQ 15 EEQ O1 O1 O 0 1 N Y N N N N -18.626 12.447 -2.223 -0.294 -1.519 1.462 O1 EEQ 16 EEQ H81 H1 H 0 1 N N N N N N -21.630 14.736 -4.604 4.159 -0.831 1.309 H81 EEQ 17 EEQ H82 H2 H 0 1 N N N N N N -23.099 15.526 -3.938 4.415 0.852 0.787 H82 EEQ 18 EEQ HN2 H3 H 0 1 N N N N N N -20.082 14.627 -3.299 1.838 0.524 1.505 HN2 EEQ 19 EEQ H2 H4 H 0 1 N N N N N N -20.470 14.583 -0.358 0.446 0.564 -1.062 H2 EEQ 20 EEQ H1 H5 H 0 1 N N N N N N -20.277 12.277 -1.053 0.348 -1.830 -0.477 H1 EEQ 21 EEQ H5 H6 H 0 1 N N N N N N -17.108 13.216 -0.706 -2.521 -0.491 1.304 H5 EEQ 22 EEQ H61 H7 H 0 1 N N N N N N -15.792 13.851 1.202 -4.499 0.477 0.094 H61 EEQ 23 EEQ H62 H8 H 0 1 N N N N N N -17.223 13.748 2.283 -3.776 -0.055 -1.443 H62 EEQ 24 EEQ HO6 H9 H 0 1 N Y N N N N -15.884 11.870 2.383 -5.284 -1.683 -0.558 HO6 EEQ 25 EEQ H4 H10 H 0 1 N N N N N N -17.034 15.574 0.003 -2.569 1.905 0.722 H4 EEQ 26 EEQ HO4 H11 H 0 1 N Y N N N N -18.392 15.407 1.888 -2.755 1.629 -1.645 HO4 EEQ 27 EEQ H3 H12 H 0 1 N N N N N N -18.004 14.862 -2.094 -0.535 1.018 1.795 H3 EEQ 28 EEQ HO3 H13 H 0 1 N Y N N N N -18.321 17.059 -1.487 -0.476 3.282 1.034 HO3 EEQ 29 EEQ HO1 H14 H 0 1 N Y N N N N -18.334 11.552 -2.097 -0.679 -2.395 1.604 HO1 EEQ 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EEQ F23 C8 SING N N 1 EEQ C8 C7 SING N N 2 EEQ C7 N2 SING N N 3 EEQ C7 O7 DOUB N N 4 EEQ N2 C2 SING N N 5 EEQ O3 C3 SING N N 6 EEQ C3 C2 SING N N 7 EEQ C3 C4 SING N N 8 EEQ C2 C1 SING N N 9 EEQ C1 O5 SING N N 10 EEQ C4 C5 SING N N 11 EEQ C4 O4 SING N N 12 EEQ C5 O5 SING N N 13 EEQ C5 C6 SING N N 14 EEQ C6 O6 SING N N 15 EEQ C1 O1 SING N N 16 EEQ C8 H81 SING N N 17 EEQ C8 H82 SING N N 18 EEQ N2 HN2 SING N N 19 EEQ C2 H2 SING N N 20 EEQ C1 H1 SING N N 21 EEQ C5 H5 SING N N 22 EEQ C6 H61 SING N N 23 EEQ C6 H62 SING N N 24 EEQ O6 HO6 SING N N 25 EEQ C4 H4 SING N N 26 EEQ O4 HO4 SING N N 27 EEQ C3 H3 SING N N 28 EEQ O3 HO3 SING N N 29 EEQ O1 HO1 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EEQ InChI InChI 1.03 "InChI=1S/C8H14FNO6/c9-1-4(12)10-5-7(14)6(13)3(2-11)16-8(5)15/h3,5-8,11,13-15H,1-2H2,(H,10,12)/t3-,5-,6+,7-,8+/m1/s1" EEQ InChIKey InChI 1.03 LMPCEKTVFVQIPT-VDUCJHRSSA-N EEQ SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](O)[C@H](NC(=O)CF)[C@@H](O)[C@H]1O" EEQ SMILES CACTVS 3.385 "OC[CH]1O[CH](O)[CH](NC(=O)CF)[CH](O)[CH]1O" EEQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)O)NC(=O)CF)O)O)O" EEQ SMILES "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(O1)O)NC(=O)CF)O)O)O" # _pdbx_chem_comp_identifier.comp_id EEQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "2-fluoranyl-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide" # _pdbx_chem_comp_related.comp_id EEQ _pdbx_chem_comp_related.related_comp_id A2G _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 EEQ C1 A2G C1 "Carbohydrate core" 2 EEQ C2 A2G C2 "Carbohydrate core" 3 EEQ C7 A2G C7 "Carbohydrate core" 4 EEQ C3 A2G C3 "Carbohydrate core" 5 EEQ C4 A2G C4 "Carbohydrate core" 6 EEQ C5 A2G C5 "Carbohydrate core" 7 EEQ C6 A2G C6 "Carbohydrate core" 8 EEQ C8 A2G C8 "Carbohydrate core" 9 EEQ N2 A2G N2 "Carbohydrate core" 10 EEQ O1 A2G O1 "Carbohydrate core" 11 EEQ O7 A2G O7 "Carbohydrate core" 12 EEQ O3 A2G O3 "Carbohydrate core" 13 EEQ O4 A2G O4 "Carbohydrate core" 14 EEQ O5 A2G O5 "Carbohydrate core" 15 EEQ O6 A2G O6 "Carbohydrate core" 16 EEQ H81 A2G H81 "Carbohydrate core" 17 EEQ H4 A2G H4 "Carbohydrate core" 18 EEQ HO4 A2G HO4 "Carbohydrate core" 19 EEQ H3 A2G H3 "Carbohydrate core" 20 EEQ HO3 A2G HO3 "Carbohydrate core" 21 EEQ HO1 A2G HO1 "Carbohydrate core" 22 EEQ H82 A2G H82 "Carbohydrate core" 23 EEQ HN2 A2G HN2 "Carbohydrate core" 24 EEQ H2 A2G H2 "Carbohydrate core" 25 EEQ H1 A2G H1 "Carbohydrate core" 26 EEQ H5 A2G H5 "Carbohydrate core" 27 EEQ H61 A2G H61 "Carbohydrate core" 28 EEQ H62 A2G H62 "Carbohydrate core" 29 EEQ HO6 A2G HO6 "Carbohydrate core" # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support EEQ "CARBOHYDRATE ISOMER" D PDB ? EEQ "CARBOHYDRATE RING" pyranose PDB ? EEQ "CARBOHYDRATE ANOMER" alpha PDB ? EEQ "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EEQ "Create component" 2018-03-16 EBI EEQ "Initial release" 2019-02-20 RCSB EEQ "Other modification" 2020-07-03 RCSB EEQ "Modify parent residue" 2020-07-17 RCSB EEQ "Modify name" 2020-07-17 RCSB EEQ "Modify synonyms" 2020-07-17 RCSB EEQ "Modify internal type" 2020-07-17 RCSB EEQ "Modify linking type" 2020-07-17 RCSB EEQ "Modify atom id" 2020-07-17 RCSB EEQ "Modify component atom id" 2020-07-17 RCSB EEQ "Modify leaving atom flag" 2020-07-17 RCSB EEQ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id EEQ _pdbx_chem_comp_pcm.modified_residue_id THR _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category Carbohydrate _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG1 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #