data_EF9 # _chem_comp.id EF9 _chem_comp.name "(3S)-1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidine-3-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H17 N O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-12-17 _chem_comp.pdbx_modified_date 2020-12-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.312 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EF9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6LJ4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EF9 N1 N1 N 0 1 N N N 30.593 41.972 26.688 -0.269 -1.139 -0.340 N1 EF9 1 EF9 C4 C1 C 0 1 N N S 28.294 43.157 27.106 -2.116 0.283 0.384 C4 EF9 2 EF9 C5 C2 C 0 1 N N N 28.425 42.845 28.533 -3.027 -0.941 0.257 C5 EF9 3 EF9 C6 C3 C 0 1 N N N 31.541 41.396 25.754 1.056 -1.184 -0.101 C6 EF9 4 EF9 C7 C4 C 0 1 N N S 32.530 40.354 26.234 1.885 0.070 -0.213 C7 EF9 5 EF9 C8 C5 C 0 1 N N N 32.540 39.136 25.311 3.194 -0.114 0.558 C8 EF9 6 EF9 C10 C6 C 0 1 N N N 27.273 42.146 26.471 -2.898 1.529 0.059 C10 EF9 7 EF9 C1 C7 C 0 1 N N N 29.110 41.556 28.731 -2.247 -2.201 0.618 C1 EF9 8 EF9 C2 C8 C 0 1 N N N 30.526 41.606 28.148 -1.071 -2.371 -0.349 C2 EF9 9 EF9 C3 C9 C 0 1 N N N 29.602 43.050 26.300 -0.942 0.143 -0.590 C3 EF9 10 EF9 C9 C10 C 0 1 N N N 33.918 41.000 26.196 2.194 0.347 -1.685 C9 EF9 11 EF9 O1 O1 O 0 1 N N N 31.564 41.726 24.618 1.582 -2.233 0.203 O1 EF9 12 EF9 O2 O2 O 0 1 N N N 26.242 41.796 27.105 -3.978 1.852 0.787 O2 EF9 13 EF9 O3 O3 O 0 1 N N N 27.500 41.687 25.321 -2.554 2.237 -0.858 O3 EF9 14 EF9 S1 S1 S 0 1 N N N 30.935 38.266 25.309 4.124 1.443 0.548 S1 EF9 15 EF9 H1 H1 H 0 1 N N N 27.891 44.173 26.987 -1.735 0.348 1.403 H1 EF9 16 EF9 H2 H2 H 0 1 N N N 29.006 43.640 29.023 -3.875 -0.833 0.933 H2 EF9 17 EF9 H3 H3 H 0 1 N N N 27.423 42.793 28.983 -3.388 -1.019 -0.769 H3 EF9 18 EF9 H4 H4 H 0 1 N N N 32.288 40.045 27.262 1.331 0.910 0.206 H4 EF9 19 EF9 H5 H5 H 0 1 N N N 33.321 38.440 25.650 2.973 -0.398 1.586 H5 EF9 20 EF9 H6 H6 H 0 1 N N N 32.765 39.468 24.287 3.788 -0.895 0.084 H6 EF9 21 EF9 H7 H7 H 0 1 N N N 28.539 40.762 28.228 -1.864 -2.113 1.635 H7 EF9 22 EF9 H8 H8 H 0 1 N N N 29.169 41.339 29.808 -2.904 -3.068 0.550 H8 EF9 23 EF9 H9 H9 H 0 1 N N N 30.984 40.614 28.274 -1.448 -2.554 -1.355 H9 EF9 24 EF9 H10 H10 H 0 1 N N N 31.104 42.351 28.715 -0.454 -3.210 -0.030 H10 EF9 25 EF9 H11 H11 H 0 1 N N N 30.120 44.017 26.388 -0.239 0.961 -0.435 H11 EF9 26 EF9 H12 H12 H 0 1 N N N 29.325 42.876 25.250 -1.313 0.167 -1.615 H12 EF9 27 EF9 H13 H13 H 0 1 N N N 33.931 41.880 26.855 1.265 0.368 -2.255 H13 EF9 28 EF9 H14 H14 H 0 1 N N N 34.670 40.274 26.539 2.697 1.310 -1.776 H14 EF9 29 EF9 H15 H15 H 0 1 N N N 34.150 41.310 25.166 2.842 -0.438 -2.075 H15 EF9 30 EF9 H16 H16 H 0 1 N N N 25.740 41.183 26.580 -4.448 2.661 0.541 H16 EF9 31 EF9 H17 H17 H 0 1 N N N 31.158 37.289 24.481 5.231 1.139 1.249 H17 EF9 32 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EF9 O1 C6 DOUB N N 1 EF9 S1 C8 SING N N 2 EF9 C8 C7 SING N N 3 EF9 O3 C10 DOUB N N 4 EF9 C6 C7 SING N N 5 EF9 C6 N1 SING N N 6 EF9 C9 C7 SING N N 7 EF9 C3 N1 SING N N 8 EF9 C3 C4 SING N N 9 EF9 C10 O2 SING N N 10 EF9 C10 C4 SING N N 11 EF9 N1 C2 SING N N 12 EF9 C4 C5 SING N N 13 EF9 C2 C1 SING N N 14 EF9 C5 C1 SING N N 15 EF9 C4 H1 SING N N 16 EF9 C5 H2 SING N N 17 EF9 C5 H3 SING N N 18 EF9 C7 H4 SING N N 19 EF9 C8 H5 SING N N 20 EF9 C8 H6 SING N N 21 EF9 C1 H7 SING N N 22 EF9 C1 H8 SING N N 23 EF9 C2 H9 SING N N 24 EF9 C2 H10 SING N N 25 EF9 C3 H11 SING N N 26 EF9 C3 H12 SING N N 27 EF9 C9 H13 SING N N 28 EF9 C9 H14 SING N N 29 EF9 C9 H15 SING N N 30 EF9 O2 H16 SING N N 31 EF9 S1 H17 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EF9 InChI InChI 1.03 "InChI=1S/C10H17NO3S/c1-7(6-15)9(12)11-4-2-3-8(5-11)10(13)14/h7-8,15H,2-6H2,1H3,(H,13,14)/t7-,8+/m1/s1" EF9 InChIKey InChI 1.03 DZPFHBBJBWEEDM-SFYZADRCSA-N EF9 SMILES_CANONICAL CACTVS 3.385 "C[C@H](CS)C(=O)N1CCC[C@@H](C1)C(O)=O" EF9 SMILES CACTVS 3.385 "C[CH](CS)C(=O)N1CCC[CH](C1)C(O)=O" EF9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CS)C(=O)N1CCC[C@@H](C1)C(=O)O" EF9 SMILES "OpenEye OEToolkits" 2.0.7 "CC(CS)C(=O)N1CCCC(C1)C(=O)O" # _pdbx_chem_comp_identifier.comp_id EF9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-1-[(2~{S})-2-methyl-3-sulfanyl-propanoyl]piperidine-3-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EF9 "Create component" 2019-12-17 PDBJ EF9 "Initial release" 2020-12-16 RCSB ##