data_EGP # _chem_comp.id EGP _chem_comp.name "N-[2-(1H-indol-3-yl)ethyl]-N'-{3-[(4-methylpiperazin-1-yl)methyl]-1-[2-(morpholin-4-yl)-2-oxoethyl]-1H-indol-6-yl}thiourea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H39 N7 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-01-10 _chem_comp.pdbx_modified_date 2019-01-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 573.752 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EGP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6C3L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EGP N N1 N 0 1 Y N N -20.717 3.700 2.166 -3.349 1.174 0.012 N EGP 1 EGP CA C1 C 0 1 N N N -21.715 4.494 1.442 -3.421 2.554 0.500 CA EGP 2 EGP C C2 C 0 1 N N N -20.986 5.789 1.050 -2.751 3.471 -0.490 C EGP 3 EGP O O1 O 0 1 N N N -19.960 6.130 1.639 -2.261 3.017 -1.503 O EGP 4 EGP CAA C3 C 0 1 N N N -14.801 6.521 6.434 -8.206 -5.044 1.234 CAA EGP 5 EGP CAD C4 C 0 1 Y N N -12.018 -1.378 1.721 9.688 0.163 -1.914 CAD EGP 6 EGP CAE C5 C 0 1 Y N N -11.831 -1.176 0.362 8.619 0.989 -1.595 CAE EGP 7 EGP CAF C6 C 0 1 Y N N -18.143 0.801 1.090 -0.512 -1.820 0.253 CAF EGP 8 EGP CAG C7 C 0 1 Y N N -12.927 -0.565 2.389 9.846 -1.054 -1.287 CAG EGP 9 EGP CAH C8 C 0 1 Y N N -12.563 -0.172 -0.265 7.704 0.609 -0.654 CAH EGP 10 EGP CAI C9 C 0 1 Y N N -18.252 1.330 2.374 -1.712 -1.964 -0.382 CAI EGP 11 EGP CAJ C10 C 0 1 Y N N -14.892 2.017 1.132 7.709 -2.482 1.263 CAJ EGP 12 EGP CAK C11 C 0 1 Y N N -19.874 2.283 0.383 -1.056 0.455 0.840 CAK EGP 13 EGP CAL C12 C 0 1 Y N N -20.417 3.841 3.457 -4.331 0.539 -0.702 CAL EGP 14 EGP CAM C13 C 0 1 N N N -15.398 1.429 -2.232 4.607 -1.189 0.831 CAM EGP 15 EGP CAN C14 C 0 1 N N N -20.872 7.877 -1.880 -1.055 6.590 -0.428 CAN EGP 16 EGP CAO C15 C 0 1 N N N -22.645 6.363 -2.163 -2.231 6.265 1.638 CAO EGP 17 EGP CAP C16 C 0 1 N N N -14.347 2.158 -1.365 5.819 -0.832 1.694 CAP EGP 18 EGP CAQ C17 C 0 1 N N N -20.821 7.731 -0.381 -2.046 5.712 -1.202 CAQ EGP 19 EGP CAR C18 C 0 1 N N N -22.721 6.043 -0.675 -3.282 5.370 0.971 CAR EGP 20 EGP CAS C19 C 0 1 N N N -16.526 4.970 7.122 -6.982 -2.967 1.006 CAS EGP 21 EGP CAT C20 C 0 1 N N N -16.302 5.579 4.812 -6.551 -4.799 -0.517 CAT EGP 22 EGP CAU C21 C 0 1 N N N -17.335 3.743 6.728 -6.397 -1.984 -0.011 CAU EGP 23 EGP CAV C22 C 0 1 N N N -17.099 4.355 4.416 -5.966 -3.815 -1.534 CAV EGP 24 EGP CAX C23 C 0 1 N N N -18.796 2.774 5.074 -4.742 -1.738 -1.762 CAX EGP 25 EGP CBC C24 C 0 1 N N N -17.790 0.790 -1.936 2.187 -0.916 0.901 CBC EGP 26 EGP CBE C25 C 0 1 Y N N -18.954 1.290 0.065 -0.173 -0.610 0.857 CBE EGP 27 EGP CBF C26 C 0 1 Y N N -14.226 1.577 0.066 7.076 -1.323 1.022 CBF EGP 28 EGP CBG C27 C 0 1 Y N N -19.452 2.967 3.709 -3.948 -0.714 -0.991 CBG EGP 29 EGP CBH C28 C 0 1 Y N N -13.601 0.388 1.740 8.930 -1.458 -0.322 CBH EGP 30 EGP CBI C29 C 0 1 Y N N -13.419 0.581 0.429 7.846 -0.620 -0.006 CBI EGP 31 EGP CBJ C30 C 0 1 Y N N -19.142 2.292 2.604 -2.613 -0.898 -0.415 CBJ EGP 32 EGP CBK C31 C 0 1 Y N N -19.935 2.761 1.634 -2.283 0.323 0.199 CBK EGP 33 EGP NAY N2 N 0 1 N N N -16.667 1.377 -1.493 3.385 -0.712 1.483 NAY EGP 34 EGP NAZ N3 N 0 1 N N N -18.902 0.774 -1.179 1.063 -0.478 1.502 NAZ EGP 35 EGP NBA N4 N 0 1 Y N N -14.507 1.274 2.170 8.814 -2.584 0.462 NBA EGP 36 EGP NBL N5 N 0 1 N N N -15.570 5.324 6.060 -7.566 -4.113 0.295 NBL EGP 37 EGP NBM N6 N 0 1 N N N -18.062 3.991 5.471 -5.382 -2.669 -0.823 NBM EGP 38 EGP NBN N7 N 0 1 N N N -21.498 6.487 0.031 -2.695 4.796 -0.250 NBN EGP 39 EGP OBB O2 O 0 1 N N N -22.224 7.721 -2.349 -1.728 7.196 0.678 OBB EGP 40 EGP SAC S1 S 0 1 N N N -17.841 0.024 -3.500 2.092 -1.733 -0.601 SAC EGP 41 EGP H1 H1 H 0 1 N N N -22.576 4.716 2.090 -4.465 2.845 0.615 H1 EGP 42 EGP H2 H2 H 0 1 N N N -22.059 3.958 0.545 -2.915 2.626 1.462 H2 EGP 43 EGP H3 H3 H 0 1 N N N -14.254 6.329 7.368 -7.452 -5.464 1.900 H3 EGP 44 EGP H4 H4 H 0 1 N N N -14.086 6.762 5.633 -8.953 -4.510 1.822 H4 EGP 45 EGP H5 H5 H 0 1 N N N -15.488 7.368 6.579 -8.689 -5.847 0.678 H5 EGP 46 EGP H6 H6 H 0 1 N N N -11.472 -2.147 2.247 10.400 0.475 -2.663 H6 EGP 47 EGP H7 H7 H 0 1 N N N -11.134 -1.783 -0.197 8.509 1.940 -2.095 H7 EGP 48 EGP H8 H8 H 0 1 N N N -17.432 0.014 0.888 0.185 -2.645 0.277 H8 EGP 49 EGP H9 H9 H 0 1 N N N -13.090 -0.706 3.447 10.679 -1.692 -1.546 H9 EGP 50 EGP H10 H10 H 0 1 N N N -12.437 -0.000 -1.324 6.876 1.258 -0.411 H10 EGP 51 EGP H11 H11 H 0 1 N N N -17.623 0.964 3.172 -1.963 -2.901 -0.858 H11 EGP 52 EGP H12 H12 H 0 1 N N N -15.609 2.824 1.152 7.388 -3.228 1.974 H12 EGP 53 EGP H13 H13 H 0 1 N N N -20.538 2.668 -0.376 -0.793 1.385 1.322 H13 EGP 54 EGP H14 H14 H 0 1 N N N -20.869 4.528 4.157 -5.273 0.982 -0.989 H14 EGP 55 EGP H15 H15 H 0 1 N N N -15.054 0.407 -2.449 4.705 -0.717 -0.147 H15 EGP 56 EGP H16 H16 H 0 1 N N N -15.542 1.975 -3.176 4.555 -2.271 0.708 H16 EGP 57 EGP H17 H17 H 0 1 N N N -20.236 7.107 -2.342 -0.233 5.975 -0.062 H17 EGP 58 EGP H18 H18 H 0 1 N N N -20.503 8.874 -2.161 -0.664 7.365 -1.087 H18 EGP 59 EGP H19 H19 H 0 1 N N N -23.637 6.223 -2.617 -2.688 6.807 2.467 H19 EGP 60 EGP H20 H20 H 0 1 N N N -21.923 5.688 -2.645 -1.414 5.649 2.013 H20 EGP 61 EGP H21 H21 H 0 1 N N N -13.368 2.075 -1.860 5.871 0.249 1.817 H21 EGP 62 EGP H22 H22 H 0 1 N N N -14.631 3.218 -1.289 5.721 -1.305 2.671 H22 EGP 63 EGP H23 H23 H 0 1 N N N -19.771 7.699 -0.054 -2.798 6.340 -1.679 H23 EGP 64 EGP H24 H24 H 0 1 N N N -21.324 8.591 0.086 -1.513 5.137 -1.959 H24 EGP 65 EGP H25 H25 H 0 1 N N N -23.592 6.556 -0.242 -3.568 4.569 1.652 H25 EGP 66 EGP H26 H26 H 0 1 N N N -22.835 4.956 -0.547 -4.159 5.964 0.713 H26 EGP 67 EGP H27 H27 H 0 1 N N N -15.974 4.756 8.049 -6.192 -3.316 1.671 H27 EGP 68 EGP H28 H28 H 0 1 N N N -17.210 5.815 7.289 -7.756 -2.468 1.590 H28 EGP 69 EGP H29 H29 H 0 1 N N N -15.586 5.821 4.013 -7.011 -5.635 -1.043 H29 EGP 70 EGP H30 H30 H 0 1 N N N -16.987 6.427 4.959 -5.757 -5.169 0.131 H30 EGP 71 EGP H31 H31 H 0 1 N N N -18.057 3.513 7.525 -7.192 -1.614 -0.659 H31 EGP 72 EGP H32 H32 H 0 1 N N N -16.655 2.889 6.592 -5.938 -1.147 0.515 H32 EGP 73 EGP H33 H33 H 0 1 N N N -17.647 4.567 3.486 -5.192 -4.313 -2.118 H33 EGP 74 EGP H34 H34 H 0 1 N N N -16.410 3.514 4.252 -6.756 -3.466 -2.199 H34 EGP 75 EGP H35 H35 H 0 1 N N N -19.573 2.560 5.822 -5.507 -1.235 -2.353 H35 EGP 76 EGP H36 H36 H 0 1 N N N -18.094 1.929 5.022 -4.075 -2.290 -2.424 H36 EGP 77 EGP H37 H37 H 0 1 N N N -16.696 1.811 -0.593 3.439 -0.250 2.334 H37 EGP 78 EGP H38 H38 H 0 1 N N N -19.730 0.359 -1.557 1.110 -0.070 2.381 H38 EGP 79 EGP H39 H39 H 0 1 N N N -14.839 1.364 3.109 9.431 -3.333 0.457 H39 EGP 80 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EGP SAC CBC DOUB N N 1 EGP OBB CAO SING N N 2 EGP OBB CAN SING N N 3 EGP CAM NAY SING N N 4 EGP CAM CAP SING N N 5 EGP CAO CAR SING N N 6 EGP CBC NAY SING N N 7 EGP CBC NAZ SING N N 8 EGP CAN CAQ SING N N 9 EGP CAP CBF SING N N 10 EGP NAZ CBE SING N N 11 EGP CAR NBN SING N N 12 EGP CAQ NBN SING N N 13 EGP CAH CAE DOUB Y N 14 EGP CAH CBI SING Y N 15 EGP NBN C SING N N 16 EGP CBE CAK DOUB Y N 17 EGP CBE CAF SING Y N 18 EGP CBF CBI SING Y N 19 EGP CBF CAJ DOUB Y N 20 EGP CAE CAD SING Y N 21 EGP CAK CBK SING Y N 22 EGP CBI CBH DOUB Y N 23 EGP C CA SING N N 24 EGP C O DOUB N N 25 EGP CAF CAI DOUB Y N 26 EGP CAJ NBA SING Y N 27 EGP CA N SING N N 28 EGP CBK N SING Y N 29 EGP CBK CBJ DOUB Y N 30 EGP CAD CAG DOUB Y N 31 EGP CBH NBA SING Y N 32 EGP CBH CAG SING Y N 33 EGP N CAL SING Y N 34 EGP CAI CBJ SING Y N 35 EGP CBJ CBG SING Y N 36 EGP CAL CBG DOUB Y N 37 EGP CBG CAX SING N N 38 EGP CAV CAT SING N N 39 EGP CAV NBM SING N N 40 EGP CAT NBL SING N N 41 EGP CAX NBM SING N N 42 EGP NBM CAU SING N N 43 EGP NBL CAA SING N N 44 EGP NBL CAS SING N N 45 EGP CAU CAS SING N N 46 EGP CA H1 SING N N 47 EGP CA H2 SING N N 48 EGP CAA H3 SING N N 49 EGP CAA H4 SING N N 50 EGP CAA H5 SING N N 51 EGP CAD H6 SING N N 52 EGP CAE H7 SING N N 53 EGP CAF H8 SING N N 54 EGP CAG H9 SING N N 55 EGP CAH H10 SING N N 56 EGP CAI H11 SING N N 57 EGP CAJ H12 SING N N 58 EGP CAK H13 SING N N 59 EGP CAL H14 SING N N 60 EGP CAM H15 SING N N 61 EGP CAM H16 SING N N 62 EGP CAN H17 SING N N 63 EGP CAN H18 SING N N 64 EGP CAO H19 SING N N 65 EGP CAO H20 SING N N 66 EGP CAP H21 SING N N 67 EGP CAP H22 SING N N 68 EGP CAQ H23 SING N N 69 EGP CAQ H24 SING N N 70 EGP CAR H25 SING N N 71 EGP CAR H26 SING N N 72 EGP CAS H27 SING N N 73 EGP CAS H28 SING N N 74 EGP CAT H29 SING N N 75 EGP CAT H30 SING N N 76 EGP CAU H31 SING N N 77 EGP CAU H32 SING N N 78 EGP CAV H33 SING N N 79 EGP CAV H34 SING N N 80 EGP CAX H35 SING N N 81 EGP CAX H36 SING N N 82 EGP NAY H37 SING N N 83 EGP NAZ H38 SING N N 84 EGP NBA H39 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EGP SMILES ACDLabs 12.01 "n2(cc(CN1CCN(C)CC1)c3ccc(cc23)NC(NCCc4cnc5ccccc45)=S)CC(=O)N6CCOCC6" EGP InChI InChI 1.03 "InChI=1S/C31H39N7O2S/c1-35-10-12-36(13-11-35)20-24-21-38(22-30(39)37-14-16-40-17-15-37)29-18-25(6-7-27(24)29)34-31(41)32-9-8-23-19-33-28-5-3-2-4-26(23)28/h2-7,18-19,21,33H,8-17,20,22H2,1H3,(H2,32,34,41)" EGP InChIKey InChI 1.03 KSDJEFBPBCSCLA-UHFFFAOYSA-N EGP SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)Cc2cn(CC(=O)N3CCOCC3)c4cc(NC(=S)NCCc5c[nH]c6ccccc56)ccc24" EGP SMILES CACTVS 3.385 "CN1CCN(CC1)Cc2cn(CC(=O)N3CCOCC3)c4cc(NC(=S)NCCc5c[nH]c6ccccc56)ccc24" EGP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN1CCN(CC1)Cc2cn(c3c2ccc(c3)NC(=S)NCCc4c[nH]c5c4cccc5)CC(=O)N6CCOCC6" EGP SMILES "OpenEye OEToolkits" 2.0.6 "CN1CCN(CC1)Cc2cn(c3c2ccc(c3)NC(=S)NCCc4c[nH]c5c4cccc5)CC(=O)N6CCOCC6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EGP "SYSTEMATIC NAME" ACDLabs 12.01 "N-[2-(1H-indol-3-yl)ethyl]-N'-{3-[(4-methylpiperazin-1-yl)methyl]-1-[2-(morpholin-4-yl)-2-oxoethyl]-1H-indol-6-yl}thiourea" EGP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[2-(1~{H}-indol-3-yl)ethyl]-3-[3-[(4-methylpiperazin-1-yl)methyl]-1-(2-morpholin-4-yl-2-oxidanylidene-ethyl)indol-6-yl]thiourea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EGP "Create component" 2018-01-10 RCSB EGP "Initial release" 2019-01-16 RCSB #