data_EHZ # _chem_comp.id EHZ _chem_comp.name "~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H49 N2 O9 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-03-23 _chem_comp.pdbx_modified_date 2018-06-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 584.703 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EHZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6G2J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EHZ O1 O1 O 0 1 N N N 257.882 230.495 267.045 5.623 -1.694 0.911 O1 EHZ 1 EHZ C1 C1 C 0 1 N N N 257.475 238.190 267.454 12.824 0.983 0.605 C1 EHZ 2 EHZ C2 C2 C 0 1 N N N 256.945 236.861 267.932 11.816 0.309 -0.327 C2 EHZ 3 EHZ C3 C3 C 0 1 N N N 257.887 235.698 267.732 10.425 0.353 0.309 C3 EHZ 4 EHZ C4 C4 C 0 1 N N N 257.385 234.402 268.320 9.416 -0.322 -0.623 C4 EHZ 5 EHZ O2 O2 O 0 1 N N N 259.989 228.908 265.739 3.065 -0.803 0.402 O2 EHZ 6 EHZ C5 C5 C 0 1 N N N 258.292 233.211 268.124 8.025 -0.277 0.014 C5 EHZ 7 EHZ C6 C6 C 0 1 N N N 258.499 232.803 266.689 7.017 -0.952 -0.918 C6 EHZ 8 EHZ C7 C7 C 0 1 N N S 258.868 231.344 266.464 5.626 -0.908 -0.282 C7 EHZ 9 EHZ C8 C8 C 0 1 N N N 260.236 230.930 266.993 4.597 -1.469 -1.265 C8 EHZ 10 EHZ C10 C9 C 0 1 N N N 262.599 227.662 265.971 0.531 -1.416 -0.416 C10 EHZ 11 EHZ C11 C10 C 0 1 N N N 262.560 227.883 264.476 -0.821 -1.819 -1.009 C11 EHZ 12 EHZ C12 C11 C 0 1 N N N 264.894 227.426 263.910 -3.175 -1.724 -0.386 C12 EHZ 13 EHZ C13 C12 C 0 1 N N N 265.907 226.404 263.440 -4.275 -1.358 0.577 C13 EHZ 14 EHZ C14 C13 C 0 1 N N N 267.294 227.003 263.502 -5.627 -1.761 -0.015 C14 EHZ 15 EHZ C15 C14 C 0 1 N N N 269.226 225.972 262.403 -7.980 -1.667 0.608 C15 EHZ 16 EHZ C16 C15 C 0 1 N N R 268.813 226.634 261.100 -9.070 -1.404 1.615 C16 EHZ 17 EHZ C17 C16 C 0 1 N N N 269.640 227.857 260.682 -9.319 0.102 1.716 C17 EHZ 18 EHZ C18 C17 C 0 1 N N N 269.539 228.952 261.747 -10.518 0.361 2.630 C18 EHZ 19 EHZ C19 C18 C 0 1 N N N 271.109 227.464 260.508 -8.079 0.786 2.296 C19 EHZ 20 EHZ C20 C19 C 0 1 N N N 269.088 228.372 259.356 -9.608 0.666 0.324 C20 EHZ 21 EHZ C21 C20 C 0 1 N N N 256.539 239.353 267.668 14.215 0.939 -0.031 C21 EHZ 22 EHZ C22 C21 C 0 1 N N N 255.234 239.246 266.916 15.224 1.614 0.901 C22 EHZ 23 EHZ C9 C22 C 0 1 N N N 260.670 229.592 266.464 3.214 -1.313 -0.689 C9 EHZ 24 EHZ N1 N1 N 0 1 N N N 263.597 227.123 263.795 -1.890 -1.462 -0.073 N1 EHZ 25 EHZ N2 N2 N 0 1 N N N 268.352 226.006 263.400 -6.696 -1.405 0.921 N2 EHZ 26 EHZ O3 O3 O 0 1 N N N 265.264 228.481 264.418 -3.446 -2.255 -1.442 O3 EHZ 27 EHZ O4 O4 O 0 1 N N N 270.303 225.386 262.478 -8.259 -2.114 -0.484 O4 EHZ 28 EHZ O5 O5 O 0 1 N N N 268.864 225.681 260.052 -10.270 -2.058 1.200 O5 EHZ 29 EHZ O6 O6 O 0 1 N N N 269.863 229.517 258.910 -9.840 2.073 0.418 O6 EHZ 30 EHZ O7 O7 O 0 1 N N N 270.347 228.981 256.516 -8.907 3.020 -1.850 O7 EHZ 31 EHZ O9 O8 O 0 1 N N N 268.159 230.056 257.170 -11.347 2.439 -1.574 O9 EHZ 32 EHZ P1 P1 P 0 1 N N N 269.659 230.015 257.387 -10.175 2.993 -0.860 P1 EHZ 33 EHZ S1 S1 S 0 1 N N N 262.288 229.132 266.983 1.852 -1.856 -1.573 S1 EHZ 34 EHZ H1 H1 H 0 1 N N N 258.113 229.587 266.888 5.842 -2.625 0.769 H1 EHZ 35 EHZ H2 H2 H 0 1 N N N 257.681 238.110 266.377 12.532 2.021 0.767 H2 EHZ 36 EHZ H3 H3 H 0 1 N N N 258.411 238.400 267.992 12.845 0.458 1.560 H3 EHZ 37 EHZ H4 H4 H 0 1 N N N 256.728 236.945 269.007 11.795 0.834 -1.282 H4 EHZ 38 EHZ H5 H5 H 0 1 N N N 256.015 236.646 267.386 12.108 -0.729 -0.489 H5 EHZ 39 EHZ H6 H6 H 0 1 N N N 258.037 235.554 266.652 10.445 -0.172 1.264 H6 EHZ 40 EHZ H7 H7 H 0 1 N N N 258.849 235.945 268.206 10.132 1.390 0.472 H7 EHZ 41 EHZ H8 H8 H 0 1 N N N 257.247 234.550 269.401 9.396 0.204 -1.577 H8 EHZ 42 EHZ H9 H9 H 0 1 N N N 256.415 234.171 267.855 9.709 -1.359 -0.785 H9 EHZ 43 EHZ H10 H10 H 0 1 N N N 257.856 232.357 268.663 8.046 -0.803 0.968 H10 EHZ 44 EHZ H11 H11 H 0 1 N N N 259.274 233.454 268.555 7.733 0.760 0.176 H11 EHZ 45 EHZ H12 H12 H 0 1 N N N 259.307 233.424 266.274 6.996 -0.426 -1.873 H12 EHZ 46 EHZ H13 H13 H 0 1 N N N 257.566 233.004 266.143 7.309 -1.989 -1.081 H13 EHZ 47 EHZ H14 H14 H 0 1 N N N 258.875 231.174 265.377 5.370 0.123 -0.038 H14 EHZ 48 EHZ H15 H15 H 0 1 N N N 260.976 231.686 266.692 4.661 -0.926 -2.208 H15 EHZ 49 EHZ H16 H16 H 0 1 N N N 260.190 230.879 268.091 4.801 -2.526 -1.441 H16 EHZ 50 EHZ H17 H17 H 0 1 N N N 261.837 226.910 266.223 0.545 -0.340 -0.241 H17 EHZ 51 EHZ H18 H18 H 0 1 N N N 263.596 227.276 266.231 0.684 -1.940 0.527 H18 EHZ 52 EHZ H19 H19 H 0 1 N N N 262.708 228.953 264.269 -0.975 -1.294 -1.952 H19 EHZ 53 EHZ H20 H20 H 0 1 N N N 261.578 227.568 264.094 -0.835 -2.894 -1.185 H20 EHZ 54 EHZ H21 H21 H 0 1 N N N 265.680 226.112 262.404 -4.121 -1.883 1.521 H21 EHZ 55 EHZ H22 H22 H 0 1 N N N 265.861 225.517 264.089 -4.261 -0.283 0.753 H22 EHZ 56 EHZ H23 H23 H 0 1 N N N 267.404 227.533 264.459 -5.780 -1.236 -0.959 H23 EHZ 57 EHZ H24 H24 H 0 1 N N N 267.405 227.717 262.673 -5.641 -2.836 -0.191 H24 EHZ 58 EHZ H25 H25 H 0 1 N N N 267.773 226.971 261.219 -8.765 -1.788 2.589 H25 EHZ 59 EHZ H26 H26 H 0 1 N N N 269.938 228.575 262.700 -10.352 -0.121 3.593 H26 EHZ 60 EHZ H27 H27 H 0 1 N N N 270.121 229.829 261.427 -10.638 1.434 2.777 H27 EHZ 61 EHZ H28 H28 H 0 1 N N N 268.485 229.239 261.879 -11.419 -0.046 2.171 H28 EHZ 62 EHZ H29 H29 H 0 1 N N N 271.506 227.093 261.465 -7.250 0.691 1.595 H29 EHZ 63 EHZ H30 H30 H 0 1 N N N 271.189 226.674 259.747 -8.292 1.842 2.465 H30 EHZ 64 EHZ H31 H31 H 0 1 N N N 271.688 228.343 260.187 -7.812 0.313 3.241 H31 EHZ 65 EHZ H32 H32 H 0 1 N N N 268.038 228.672 259.490 -8.753 0.482 -0.327 H32 EHZ 66 EHZ H33 H33 H 0 1 N N N 269.148 227.574 258.601 -10.491 0.179 -0.090 H33 EHZ 67 EHZ H34 H34 H 0 1 N N N 257.050 240.271 267.342 14.508 -0.098 -0.194 H34 EHZ 68 EHZ H35 H35 H 0 1 N N N 256.313 239.420 268.742 14.195 1.465 -0.986 H35 EHZ 69 EHZ H36 H36 H 0 1 N N N 254.534 239.388 267.752 14.931 2.651 1.063 H36 EHZ 70 EHZ H37 H37 H 0 1 N N N 255.292 240.172 266.325 15.244 1.088 1.855 H37 EHZ 71 EHZ H39 H39 H 0 1 N N N 263.331 226.348 263.222 -1.674 -1.038 0.772 H39 EHZ 72 EHZ H40 H40 H 0 1 N N N 268.422 225.313 264.117 -6.479 -0.980 1.766 H40 EHZ 73 EHZ H41 H41 H 0 1 N N N 269.438 224.966 260.301 -10.601 -1.765 0.340 H41 EHZ 74 EHZ H42 H42 H 0 1 N N N 269.700 228.536 255.981 -8.101 3.372 -1.448 H42 EHZ 75 EHZ OP3 OP3 O 0 1 N N N 270.241 231.440 257.084 -10.505 4.491 -0.370 OP3 EHZ 76 EHZ C23 C23 C 0 1 N N N ? ? ? 16.615 1.570 0.264 C23 EHZ 77 EHZ C24 C24 C 0 1 N N N ? ? ? 17.623 2.244 1.196 C24 EHZ 78 EHZ C25 C25 C 0 1 N N N ? ? ? 19.014 2.200 0.560 C25 EHZ 79 EHZ H44 H44 H 0 1 N N N 269.535 232.023 256.830 -10.717 5.102 -1.089 H44 EHZ 80 EHZ H45 H45 H 0 1 N N N ? ? ? 16.907 0.532 0.102 H45 EHZ 81 EHZ H46 H46 H 0 1 N N N ? ? ? 16.594 2.095 -0.690 H46 EHZ 82 EHZ H47 H47 H 0 1 N N N ? ? ? 17.331 3.282 1.359 H47 EHZ 83 EHZ H48 H48 H 0 1 N N N ? ? ? 17.644 1.719 2.151 H48 EHZ 84 EHZ H49 H49 H 0 1 N N N ? ? ? 19.307 1.163 0.398 H49 EHZ 85 EHZ H50 H50 H 0 1 N N N ? ? ? 18.994 2.726 -0.395 H50 EHZ 86 EHZ H51 H51 H 0 1 N N N ? ? ? 19.733 2.681 1.224 H51 EHZ 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EHZ O7 P1 SING N N 1 EHZ O9 P1 DOUB N N 2 EHZ P1 O6 SING N N 3 EHZ O6 C20 SING N N 4 EHZ C20 C17 SING N N 5 EHZ O5 C16 SING N N 6 EHZ C19 C17 SING N N 7 EHZ C17 C16 SING N N 8 EHZ C17 C18 SING N N 9 EHZ C16 C15 SING N N 10 EHZ C15 O4 DOUB N N 11 EHZ C15 N2 SING N N 12 EHZ N2 C14 SING N N 13 EHZ C13 C14 SING N N 14 EHZ C13 C12 SING N N 15 EHZ N1 C12 SING N N 16 EHZ N1 C11 SING N N 17 EHZ C12 O3 DOUB N N 18 EHZ C11 C10 SING N N 19 EHZ O2 C9 DOUB N N 20 EHZ C10 S1 SING N N 21 EHZ C7 C6 SING N N 22 EHZ C7 C8 SING N N 23 EHZ C7 O1 SING N N 24 EHZ C9 S1 SING N N 25 EHZ C9 C8 SING N N 26 EHZ C6 C5 SING N N 27 EHZ C22 C21 SING N N 28 EHZ C1 C21 SING N N 29 EHZ C1 C2 SING N N 30 EHZ C3 C2 SING N N 31 EHZ C3 C4 SING N N 32 EHZ C5 C4 SING N N 33 EHZ O1 H1 SING N N 34 EHZ C1 H2 SING N N 35 EHZ C1 H3 SING N N 36 EHZ C2 H4 SING N N 37 EHZ C2 H5 SING N N 38 EHZ C3 H6 SING N N 39 EHZ C3 H7 SING N N 40 EHZ C4 H8 SING N N 41 EHZ C4 H9 SING N N 42 EHZ C5 H10 SING N N 43 EHZ C5 H11 SING N N 44 EHZ C6 H12 SING N N 45 EHZ C6 H13 SING N N 46 EHZ C7 H14 SING N N 47 EHZ C8 H15 SING N N 48 EHZ C8 H16 SING N N 49 EHZ C10 H17 SING N N 50 EHZ C10 H18 SING N N 51 EHZ C11 H19 SING N N 52 EHZ C11 H20 SING N N 53 EHZ C13 H21 SING N N 54 EHZ C13 H22 SING N N 55 EHZ C14 H23 SING N N 56 EHZ C14 H24 SING N N 57 EHZ C16 H25 SING N N 58 EHZ C18 H26 SING N N 59 EHZ C18 H27 SING N N 60 EHZ C18 H28 SING N N 61 EHZ C19 H29 SING N N 62 EHZ C19 H30 SING N N 63 EHZ C19 H31 SING N N 64 EHZ C20 H32 SING N N 65 EHZ C20 H33 SING N N 66 EHZ C21 H34 SING N N 67 EHZ C21 H35 SING N N 68 EHZ C22 H36 SING N N 69 EHZ C22 H37 SING N N 70 EHZ N1 H39 SING N N 71 EHZ N2 H40 SING N N 72 EHZ O5 H41 SING N N 73 EHZ O7 H42 SING N N 74 EHZ P1 OP3 SING N N 75 EHZ C22 C23 SING N N 76 EHZ C23 C24 SING N N 77 EHZ C24 C25 SING N N 78 EHZ OP3 H44 SING N N 79 EHZ C23 H45 SING N N 80 EHZ C23 H46 SING N N 81 EHZ C24 H47 SING N N 82 EHZ C24 H48 SING N N 83 EHZ C25 H49 SING N N 84 EHZ C25 H50 SING N N 85 EHZ C25 H51 SING N N 86 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EHZ InChI InChI 1.03 "InChI=1S/C25H49N2O9PS/c1-4-5-6-7-8-9-10-11-12-13-20(28)18-22(30)38-17-16-26-21(29)14-15-27-24(32)23(31)25(2,3)19-36-37(33,34)35/h20,23,28,31H,4-19H2,1-3H3,(H,26,29)(H,27,32)(H2,33,34,35)/t20-,23-/m0/s1" EHZ InChIKey InChI 1.03 JYSKQPQRUCZFIQ-REWPJTCUSA-N EHZ SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O" EHZ SMILES CACTVS 3.385 "CCCCCCCCCCC[CH](O)CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O" EHZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCC[C@@H](CC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O)O" EHZ SMILES "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCC(CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EHZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EHZ "Create component" 2018-03-23 EBI EHZ "Initial release" 2018-06-06 RCSB #