data_EIB # _chem_comp.id EIB _chem_comp.name "[(3S,3aR,4R,6Z,9S,10E,11aR)-9-acetyloxy-6-(acetyloxymethyl)-3,10-dimethyl-2-oxidanylidene-3a,4,5,8,9,11a-hexahydro-3H-cyclodeca[b]furan-4-yl] (E)-2-methyl-4-oxidanyl-but-2-enoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Bound form of Eupalinolide B" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-03 _chem_comp.pdbx_modified_date 2022-08-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 464.505 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EIB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CFR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EIB CAA C1 C 0 1 N N N -40.460 40.749 27.144 5.002 1.510 -1.296 CAA EIB 1 EIB CAB C2 C 0 1 N N N -39.128 41.008 27.849 5.512 2.538 -2.272 CAB EIB 2 EIB CAE C3 C 0 1 N N S -39.131 40.254 25.321 3.286 0.161 -0.340 CAE EIB 3 EIB CAF C4 C 0 1 N N N -38.089 39.228 25.875 2.851 0.846 0.964 CAF EIB 4 EIB CAG C5 C 0 1 N N N -39.305 40.068 23.952 2.101 -0.607 -0.883 CAG EIB 5 EIB CAH C6 C 0 1 N N N -38.630 40.851 23.025 1.350 -0.055 -2.066 CAH EIB 6 EIB CAI C7 C 0 1 N N N -37.739 38.224 24.952 1.815 -0.006 1.652 CAI EIB 7 EIB CAJ C8 C 0 1 N N N -38.482 37.052 24.848 0.563 0.373 1.711 CAJ EIB 8 EIB CAK C9 C 0 1 N N N -40.111 39.004 23.572 1.781 -1.743 -0.327 CAK EIB 9 EIB CAL C10 C 0 1 N N R -40.259 38.508 22.300 0.412 -2.345 -0.452 CAL EIB 10 EIB CAM C11 C 0 1 N N R -39.053 37.631 22.000 -0.166 -2.552 0.965 CAM EIB 11 EIB CAN C12 C 0 1 N N R -39.165 36.222 22.610 -1.120 -1.422 1.333 CAN EIB 12 EIB CAO C13 C 0 1 N N N -38.162 36.047 23.769 -0.463 -0.511 2.373 CAO EIB 13 EIB CAP C14 C 0 1 N N S -39.114 37.567 20.511 -0.897 -3.910 0.848 CAP EIB 14 EIB CAQ C15 C 0 1 N N N -39.722 38.780 20.200 -0.266 -4.546 -0.374 CAQ EIB 15 EIB CAT C16 C 0 1 N N N -37.684 37.556 19.997 -0.648 -4.765 2.092 CAT EIB 16 EIB CAV C17 C 0 1 N N N -39.561 36.842 25.695 0.141 1.689 1.109 CAV EIB 17 EIB CAX C18 C 0 1 N N N -40.273 34.983 26.776 -0.647 3.830 1.797 CAX EIB 18 EIB CAY C19 C 0 1 N N N -41.746 34.704 27.080 -1.061 4.835 2.841 CAY EIB 19 EIB CBA C20 C 0 1 N N N -40.774 34.677 23.069 -2.647 -0.061 0.100 CBA EIB 20 EIB CBB C21 C 0 1 N N N -42.191 34.327 22.624 -3.034 0.737 -1.071 CBB EIB 21 EIB CBD C22 C 0 1 N N N -42.632 32.867 22.569 -4.231 1.318 -1.115 CBD EIB 22 EIB CBE C23 C 0 1 N N N -43.166 35.435 22.230 -2.077 0.897 -2.224 CBE EIB 23 EIB CBF C24 C 0 1 N N N -44.072 32.648 22.110 -4.628 2.136 -2.316 CBF EIB 24 EIB OAC O1 O 0 1 N N N -40.380 40.045 25.982 3.706 1.162 -1.304 OAC EIB 25 EIB OAD O2 O 0 1 N N N -41.517 41.158 27.623 5.761 0.994 -0.510 OAD EIB 26 EIB OAR O3 O 0 1 N N N -40.177 39.493 21.273 0.470 -3.666 -1.065 OAR EIB 27 EIB OAS O4 O 0 1 N N N -39.834 39.150 19.033 -0.410 -5.705 -0.687 OAS EIB 28 EIB OAU O5 O 0 1 N N N -40.492 36.002 23.085 -1.435 -0.649 0.144 OAU EIB 29 EIB OAW O6 O 0 1 N N N -40.033 35.503 25.546 -0.243 2.605 2.168 OAW EIB 30 EIB OAZ O7 O 0 1 N N N -39.395 34.750 27.606 -0.680 4.127 0.626 OAZ EIB 31 EIB OBC O8 O 0 1 N N N -39.975 33.803 23.390 -3.420 -0.190 1.030 OBC EIB 32 EIB OBG O9 O 0 1 N N N -44.911 32.499 23.257 -5.961 1.797 -2.704 OBG EIB 33 EIB H1 H1 H 0 1 N N N -39.306 41.576 28.774 6.582 2.685 -2.120 H1 EIB 34 EIB H2 H2 H 0 1 N N N -38.651 40.048 28.095 5.334 2.193 -3.290 H2 EIB 35 EIB H3 H3 H 0 1 N N N -38.468 41.586 27.185 4.990 3.481 -2.112 H3 EIB 36 EIB H4 H4 H 0 1 N N N -38.760 41.268 25.529 4.109 -0.525 -0.139 H4 EIB 37 EIB H5 H5 H 0 1 N N N -38.516 38.746 26.767 3.715 0.966 1.618 H5 EIB 38 EIB H6 H6 H 0 1 N N N -37.177 39.776 26.155 2.427 1.824 0.737 H6 EIB 39 EIB H7 H7 H 0 1 N N N -38.057 41.630 23.550 1.793 -0.435 -2.986 H7 EIB 40 EIB H8 H8 H 0 1 N N N -37.943 40.219 22.443 0.307 -0.364 -2.010 H8 EIB 41 EIB H9 H9 H 0 1 N N N -39.356 41.324 22.347 1.408 1.033 -2.056 H9 EIB 42 EIB H10 H10 H 0 1 N N N -36.879 38.366 24.314 2.110 -0.943 2.106 H10 EIB 43 EIB H11 H11 H 0 1 N N N -40.677 38.519 24.353 2.472 -2.191 0.382 H11 EIB 44 EIB H12 H12 H 0 1 N N N -41.179 37.914 22.200 -0.265 -1.716 -1.020 H12 EIB 45 EIB H13 H13 H 0 1 N N N -38.127 38.120 22.336 0.643 -2.628 1.692 H13 EIB 46 EIB H14 H14 H 0 1 N N N -38.922 35.487 21.829 -2.037 -1.841 1.746 H14 EIB 47 EIB H15 H15 H 0 1 N N N -38.243 35.029 24.177 0.024 -1.123 3.133 H15 EIB 48 EIB H16 H16 H 0 1 N N N -37.139 36.214 23.401 -1.225 0.109 2.844 H16 EIB 49 EIB H17 H17 H 0 1 N N N -39.676 36.689 20.160 -1.966 -3.760 0.695 H17 EIB 50 EIB H18 H18 H 0 1 N N N -37.211 36.595 20.247 -1.017 -4.241 2.974 H18 EIB 51 EIB H19 H19 H 0 1 N N N -37.686 37.691 18.905 -1.170 -5.716 1.990 H19 EIB 52 EIB H20 H20 H 0 1 N N N -37.119 38.375 20.467 0.421 -4.948 2.200 H20 EIB 53 EIB H21 H21 H 0 1 N N N -39.246 37.006 26.736 0.971 2.113 0.544 H21 EIB 54 EIB H22 H22 H 0 1 N N N -40.368 37.545 25.441 -0.707 1.528 0.442 H22 EIB 55 EIB H23 H23 H 0 1 N N N -41.840 34.293 28.096 -1.355 5.764 2.354 H23 EIB 56 EIB H24 H24 H 0 1 N N N -42.319 35.641 27.009 -1.902 4.441 3.411 H24 EIB 57 EIB H25 H25 H 0 1 N N N -42.139 33.978 26.353 -0.224 5.026 3.513 H25 EIB 58 EIB H27 H27 H 0 1 N N N -41.976 32.051 22.834 -4.917 1.203 -0.289 H27 EIB 59 EIB H29 H29 H 0 1 N N N -42.672 36.412 22.333 -2.238 0.096 -2.944 H29 EIB 60 EIB H30 H30 H 0 1 N N N -43.481 35.292 21.186 -2.247 1.860 -2.707 H30 EIB 61 EIB H31 H31 H 0 1 N N N -44.047 35.399 22.887 -1.052 0.853 -1.854 H31 EIB 62 EIB H32 H32 H 0 1 N N N -44.406 33.514 21.519 -4.581 3.196 -2.066 H32 EIB 63 EIB H33 H33 H 0 1 N N N -44.128 31.739 21.492 -3.946 1.927 -3.140 H33 EIB 64 EIB H34 H34 H 0 1 N N N -45.809 32.362 22.978 -6.284 2.287 -3.473 H34 EIB 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EIB OAS CAQ DOUB N N 1 EIB CAT CAP SING N N 2 EIB CAQ CAP SING N N 3 EIB CAQ OAR SING N N 4 EIB CAP CAM SING N N 5 EIB OAR CAL SING N N 6 EIB CAM CAL SING N N 7 EIB CAM CAN SING N N 8 EIB CBF CBD SING N N 9 EIB CBF OBG SING N N 10 EIB CBE CBB SING N N 11 EIB CAL CAK SING N N 12 EIB CBD CBB DOUB N E 13 EIB CAN OAU SING N N 14 EIB CAN CAO SING N N 15 EIB CBB CBA SING N N 16 EIB CAH CAG SING N N 17 EIB CBA OAU SING N N 18 EIB CBA OBC DOUB N N 19 EIB CAK CAG DOUB N E 20 EIB CAO CAJ SING N N 21 EIB CAG CAE SING N N 22 EIB CAJ CAI DOUB N Z 23 EIB CAJ CAV SING N N 24 EIB CAI CAF SING N N 25 EIB CAE CAF SING N N 26 EIB CAE OAC SING N N 27 EIB OAW CAV SING N N 28 EIB OAW CAX SING N N 29 EIB OAC CAA SING N N 30 EIB CAX CAY SING N N 31 EIB CAX OAZ DOUB N N 32 EIB CAA OAD DOUB N N 33 EIB CAA CAB SING N N 34 EIB CAB H1 SING N N 35 EIB CAB H2 SING N N 36 EIB CAB H3 SING N N 37 EIB CAE H4 SING N N 38 EIB CAF H5 SING N N 39 EIB CAF H6 SING N N 40 EIB CAH H7 SING N N 41 EIB CAH H8 SING N N 42 EIB CAH H9 SING N N 43 EIB CAI H10 SING N N 44 EIB CAK H11 SING N N 45 EIB CAL H12 SING N N 46 EIB CAM H13 SING N N 47 EIB CAN H14 SING N N 48 EIB CAO H15 SING N N 49 EIB CAO H16 SING N N 50 EIB CAP H17 SING N N 51 EIB CAT H18 SING N N 52 EIB CAT H19 SING N N 53 EIB CAT H20 SING N N 54 EIB CAV H21 SING N N 55 EIB CAV H22 SING N N 56 EIB CAY H23 SING N N 57 EIB CAY H24 SING N N 58 EIB CAY H25 SING N N 59 EIB CBD H27 SING N N 60 EIB CBE H29 SING N N 61 EIB CBE H30 SING N N 62 EIB CBE H31 SING N N 63 EIB CBF H32 SING N N 64 EIB CBF H33 SING N N 65 EIB OBG H34 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EIB InChI InChI 1.03 "InChI=1S/C24H32O9/c1-13(8-9-25)23(28)32-21-11-18(12-30-16(4)26)6-7-19(31-17(5)27)14(2)10-20-22(21)15(3)24(29)33-20/h6,8,10,15,19-22,25H,7,9,11-12H2,1-5H3/b13-8+,14-10+,18-6-/t15-,19-,20+,21+,22-/m0/s1" EIB InChIKey InChI 1.03 OODVVMBLOMLDHK-QIQWNYEBSA-N EIB SMILES_CANONICAL CACTVS 3.385 "C[C@H]1[C@@H]2[C@@H](C\C(=C\C[C@H](OC(C)=O)/C(=C/[C@H]2OC1=O)C)COC(C)=O)OC(=O)/C(C)=C/CO" EIB SMILES CACTVS 3.385 "C[CH]1[CH]2[CH](CC(=CC[CH](OC(C)=O)C(=C[CH]2OC1=O)C)COC(C)=O)OC(=O)C(C)=CCO" EIB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@@H]2[C@@H](C/C(=C/C[C@@H](/C(=C/[C@H]2OC1=O)/C)OC(=O)C)/COC(=O)C)OC(=O)/C(=C/CO)/C" EIB SMILES "OpenEye OEToolkits" 2.0.7 "CC1C2C(CC(=CCC(C(=CC2OC1=O)C)OC(=O)C)COC(=O)C)OC(=O)C(=CCO)C" # _pdbx_chem_comp_identifier.comp_id EIB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{S},3~{a}~{R},4~{R},6~{Z},9~{S},10~{E},11~{a}~{R})-9-acetyloxy-6-(acetyloxymethyl)-3,10-dimethyl-2-oxidanylidene-3~{a},4,5,8,9,11~{a}-hexahydro-3~{H}-cyclodeca[b]furan-4-yl] (~{E})-2-methyl-4-oxidanyl-but-2-enoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EIB "Create component" 2020-07-03 PDBJ EIB "Modify synonyms" 2020-07-03 PDBJ EIB "Initial release" 2022-08-24 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EIB _pdbx_chem_comp_synonyms.name "Bound form of Eupalinolide B" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #