data_EIF # _chem_comp.id EIF _chem_comp.name "[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 F N5 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-18 _chem_comp.pdbx_modified_date 2024-07-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 379.238 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EIF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PTS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EIF O6 O1 O 0 1 N N N N N N 19.483 46.020 13.962 5.230 2.641 0.950 O6 EIF 1 EIF C10 C1 C 0 1 N N N N N N 20.343 46.215 13.125 4.728 1.694 0.368 C10 EIF 2 EIF C7 C2 C 0 1 Y N N N N N 21.750 46.435 13.274 3.340 1.439 0.463 C7 EIF 3 EIF N1 N1 N 0 1 Y N N N N N 22.522 46.490 14.444 2.311 2.042 1.108 N1 EIF 4 EIF C6 C3 C 0 1 Y N N N N N 23.774 46.727 14.021 1.210 1.394 0.862 C6 EIF 5 EIF N4 N2 N 0 1 N N N N N N 19.916 46.237 11.746 5.482 0.867 -0.389 N4 EIF 6 EIF C9 C4 C 0 1 N N N N N N 20.808 46.440 10.682 4.908 -0.184 -1.041 C9 EIF 7 EIF N3 N3 N 0 1 N N N N N N 20.302 46.447 9.399 5.698 -1.003 -1.808 N3 EIF 8 EIF N2 N4 N 0 1 N N N N N N 22.147 46.643 10.804 3.620 -0.432 -0.960 N2 EIF 9 EIF C8 C5 C 0 1 Y N N N N N 22.549 46.632 12.132 2.812 0.340 -0.224 C8 EIF 10 EIF N N5 N 0 1 Y N N N N N 23.842 46.828 12.601 1.470 0.334 0.043 N EIF 11 EIF C5 C6 C 0 1 N N R N N N 24.980 47.111 11.736 0.489 -0.626 -0.469 C5 EIF 12 EIF C1 C7 C 0 1 N N R N N N 25.429 48.630 11.798 0.461 -1.877 0.430 C1 EIF 13 EIF F F1 F 0 1 N N N N N N 25.724 49.025 10.539 0.800 -3.017 -0.308 F EIF 14 EIF C C8 C 0 1 N N N N N N 24.413 49.591 12.399 1.413 -1.706 1.615 C EIF 15 EIF O5 O2 O 0 1 N N N N N N 26.056 46.333 12.215 -0.826 -0.046 -0.435 O5 EIF 16 EIF C3 C9 C 0 1 N N R N N N 27.226 47.121 12.243 -1.751 -1.116 -0.145 C3 EIF 17 EIF C2 C10 C 0 1 N N R N N N 26.745 48.534 12.642 -1.005 -1.961 0.919 C2 EIF 18 EIF O O3 O 0 1 N N N N N N 27.632 49.562 12.411 -1.469 -3.312 0.913 O EIF 19 EIF C4 C11 C 0 1 N N N N N N 28.246 46.446 13.162 -3.057 -0.560 0.427 C4 EIF 20 EIF O1 O4 O 0 1 N N N N N N 27.863 46.512 14.503 -3.729 0.204 -0.577 O1 EIF 21 EIF P P1 P 0 1 N N N N N N 28.845 46.037 15.702 -5.139 0.938 -0.322 P EIF 22 EIF O4 O5 O 0 1 N N N N N N 30.110 46.790 15.745 -5.662 1.589 -1.699 O4 EIF 23 EIF O3 O6 O 0 1 N N N N N N 28.934 44.484 15.508 -6.129 -0.050 0.164 O3 EIF 24 EIF O2 O7 O 0 1 N N N N N N 27.874 46.120 16.936 -4.950 2.095 0.781 O2 EIF 25 EIF H11 H1 H 0 1 N N N N N N 24.626 46.829 14.677 0.236 1.656 1.248 H11 EIF 26 EIF H14 H2 H 0 1 N N N N N N 18.947 46.102 11.541 6.436 1.023 -0.470 H14 EIF 27 EIF H12 H3 H 0 1 N N N N N N 20.913 46.596 8.621 5.304 -1.753 -2.280 H12 EIF 28 EIF H13 H4 H 0 1 N N N N N N 19.324 46.303 9.246 6.650 -0.833 -1.877 H13 EIF 29 EIF H2 H5 H 0 1 N N N N N N 24.741 46.856 10.693 0.743 -0.909 -1.491 H2 EIF 30 EIF H5 H6 H 0 1 N N N N N N 24.169 49.274 13.424 1.107 -0.840 2.204 H5 EIF 31 EIF H4 H7 H 0 1 N N N N N N 24.836 50.606 12.420 1.380 -2.599 2.239 H4 EIF 32 EIF H3 H8 H 0 1 N N N N N N 23.499 49.588 11.787 2.428 -1.556 1.248 H3 EIF 33 EIF H1 H9 H 0 1 N N N N N N 27.659 47.181 11.234 -1.945 -1.709 -1.039 H1 EIF 34 EIF H H10 H 0 1 N N N N N N 26.460 48.508 13.704 -1.110 -1.519 1.910 H EIF 35 EIF H6 H11 H 0 1 N N N N N N 28.404 49.443 12.952 -2.382 -3.416 1.212 H6 EIF 36 EIF H7 H12 H 0 1 N N N N N N 28.342 45.389 12.871 -3.695 -1.384 0.744 H7 EIF 37 EIF H8 H13 H 0 1 N N N N N N 29.218 46.948 13.045 -2.836 0.079 1.282 H8 EIF 38 EIF H9 H15 H 0 1 N N N N N N 27.626 45.243 17.204 -4.314 2.778 0.529 H9 EIF 39 EIF H15 H16 H 0 1 N N N N N N 30.840 46.190 15.643 -6.509 2.049 -1.620 H15 EIF 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EIF N3 C9 SING N N 1 EIF F C1 SING N N 2 EIF C9 N2 DOUB N N 3 EIF C9 N4 SING N N 4 EIF N2 C8 SING N N 5 EIF C5 C1 SING N N 6 EIF C5 O5 SING N N 7 EIF C5 N SING N N 8 EIF N4 C10 SING N N 9 EIF C1 C SING N N 10 EIF C1 C2 SING N N 11 EIF C8 N SING Y N 12 EIF C8 C7 DOUB Y N 13 EIF O5 C3 SING N N 14 EIF C3 C2 SING N N 15 EIF C3 C4 SING N N 16 EIF O C2 SING N N 17 EIF N C6 SING Y N 18 EIF C10 C7 SING N N 19 EIF C10 O6 DOUB N N 20 EIF C4 O1 SING N N 21 EIF C7 N1 SING Y N 22 EIF C6 N1 DOUB Y N 23 EIF O1 P SING N N 24 EIF O3 P DOUB N N 25 EIF P O4 SING N N 26 EIF P O2 SING N N 27 EIF C6 H11 SING N N 28 EIF N4 H14 SING N N 29 EIF N3 H12 SING N N 30 EIF N3 H13 SING N N 31 EIF C5 H2 SING N N 32 EIF C H5 SING N N 33 EIF C H4 SING N N 34 EIF C H3 SING N N 35 EIF C3 H1 SING N N 36 EIF C2 H SING N N 37 EIF O H6 SING N N 38 EIF C4 H7 SING N N 39 EIF C4 H8 SING N N 40 EIF O2 H9 SING N N 41 EIF O4 H15 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EIF InChI InChI 1.06 "InChI=1S/C11H15FN5O7P/c1-11(12)6(18)4(2-23-25(20,21)22)24-9(11)17-3-14-5-7(17)15-10(13)16-8(5)19/h3-4,6,9,18H,2H2,1H3,(H2,20,21,22)(H3,13,15,16,19)/t4-,6-,9-,11-/m1/s1" EIF InChIKey InChI 1.06 BOEZKCHYGLAVGV-GITKWUPZSA-N EIF SMILES_CANONICAL CACTVS 3.385 "C[C@@]1(F)[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3C(=O)NC(=Nc23)N" EIF SMILES CACTVS 3.385 "C[C]1(F)[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3C(=O)NC(=Nc23)N" EIF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]1([C@@H]([C@H](O[C@H]1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O)F" EIF SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C(C(OC1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O)F" # _pdbx_chem_comp_identifier.comp_id EIF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EIF "Create component" 2023-07-18 PDBE EIF "Initial release" 2024-07-24 RCSB #