data_EKF # _chem_comp.id EKF _chem_comp.name "N-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-[4-[(dimethylamino)methyl]phenyl]-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H24 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-01-08 _chem_comp.pdbx_modified_date 2022-04-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 400.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EKF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6LO5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EKF C1 C1 C 0 1 Y N N 30.990 -75.104 5.924 0.680 1.445 -0.307 C1 EKF 1 EKF C2 C2 C 0 1 Y N N 31.624 -75.455 7.061 1.535 0.357 -0.253 C2 EKF 2 EKF C3 C3 C 0 1 Y N N 32.097 -74.336 7.919 0.937 -0.979 -0.287 C3 EKF 3 EKF C12 C4 C 0 1 N N N 30.156 -71.134 5.018 -3.378 1.169 -0.537 C12 EKF 4 EKF C13 C5 C 0 1 Y N N 28.649 -71.332 5.203 -4.832 0.782 -0.619 C13 EKF 5 EKF C14 C6 C 0 1 Y N N 27.922 -70.537 6.118 -5.486 0.799 -1.838 C14 EKF 6 EKF C15 C7 C 0 1 Y N N 26.519 -70.640 6.242 -6.820 0.442 -1.907 C15 EKF 7 EKF C16 C8 C 0 1 Y N N 25.804 -71.571 5.467 -7.502 0.072 -0.767 C16 EKF 8 EKF C17 C9 C 0 1 Y N N 26.538 -72.366 4.556 -6.853 0.056 0.465 C17 EKF 9 EKF C18 C10 C 0 1 Y N N 27.929 -72.257 4.430 -5.509 0.405 0.519 C18 EKF 10 EKF C20 C11 C 0 1 N N N 27.014 -73.868 2.939 -6.232 -0.553 2.575 C20 EKF 11 EKF C21 C12 C 0 1 N N N 28.370 -73.262 3.375 -5.074 0.273 1.966 C21 EKF 12 EKF C22 C13 C 0 1 Y N N 30.776 -77.822 7.319 3.567 1.133 0.963 C22 EKF 13 EKF C23 C14 C 0 1 Y N N 30.975 -79.190 7.600 4.935 1.299 1.039 C23 EKF 14 EKF C24 C15 C 0 1 Y N N 32.262 -79.646 7.938 5.745 0.879 -0.000 C24 EKF 15 EKF C25 C16 C 0 1 Y N N 33.329 -78.728 8.032 5.190 0.290 -1.122 C25 EKF 16 EKF C26 C17 C 0 1 Y N N 33.131 -77.360 7.762 3.824 0.117 -1.210 C26 EKF 17 EKF C27 C18 C 0 1 N N N 32.491 -81.138 8.260 7.238 1.064 0.089 C27 EKF 18 EKF C29 C19 C 0 1 N N N 34.397 -81.634 6.637 7.687 -1.304 -0.143 C29 EKF 19 EKF C30 C20 C 0 1 N N N 32.026 -82.272 6.037 9.256 0.117 1.034 C30 EKF 20 EKF C9 C21 C 0 1 Y N N 32.372 -72.407 8.537 -0.711 -2.406 -0.383 C9 EKF 21 EKF O19 O1 O 0 1 N N N 25.934 -73.301 3.740 -7.332 -0.254 1.701 O19 EKF 22 EKF N8 N1 N 0 1 Y N N 32.950 -73.105 9.430 0.429 -3.043 -0.315 N8 EKF 23 EKF N28 N2 N 0 1 N N N 33.005 -81.939 7.108 7.842 -0.120 0.714 N28 EKF 24 EKF N6 N3 N 0 1 Y N N 30.782 -73.701 5.676 -0.637 1.258 -0.381 N6 EKF 25 EKF C5 C22 C 0 1 Y N N 31.154 -72.772 6.492 -1.186 0.065 -0.407 C5 EKF 26 EKF N7 N4 N 0 1 Y N N 32.773 -74.451 8.996 1.406 -2.206 -0.257 N7 EKF 27 EKF C10 C23 C 0 1 Y N N 31.850 -76.912 7.401 3.002 0.539 -0.165 C10 EKF 28 EKF N11 N5 N 0 1 N N N 30.898 -71.506 6.214 -2.553 -0.040 -0.484 N11 EKF 29 EKF N4 N6 N 0 1 Y N N 31.833 -73.110 7.579 -0.434 -1.072 -0.370 N4 EKF 30 EKF H1 H1 H 0 1 N N N 30.649 -75.851 5.222 1.082 2.447 -0.284 H1 EKF 31 EKF H2 H2 H 0 1 N N N 30.497 -71.757 4.178 -3.109 1.755 -1.416 H2 EKF 32 EKF H3 H3 H 0 1 N N N 30.352 -70.075 4.792 -3.210 1.764 0.361 H3 EKF 33 EKF H4 H4 H 0 1 N N N 28.454 -69.832 6.739 -4.956 1.091 -2.733 H4 EKF 34 EKF H5 H5 H 0 1 N N N 25.992 -70.001 6.935 -7.330 0.452 -2.859 H5 EKF 35 EKF H6 H6 H 0 1 N N N 24.733 -71.675 5.564 -8.544 -0.205 -0.829 H6 EKF 36 EKF H7 H7 H 0 1 N N N 26.838 -73.641 1.877 -6.001 -1.618 2.549 H7 EKF 37 EKF H8 H8 H 0 1 N N N 29.033 -74.028 3.803 -4.129 -0.264 2.044 H8 EKF 38 EKF H9 H9 H 0 1 N N N 29.794 -77.469 7.039 2.937 1.457 1.777 H9 EKF 39 EKF H10 H10 H 0 1 N N N 30.146 -79.881 7.556 5.374 1.759 1.913 H10 EKF 40 EKF H11 H11 H 0 1 N N N 34.311 -79.079 8.315 5.827 -0.036 -1.931 H11 EKF 41 EKF H12 H12 H 0 1 N N N 33.954 -76.664 7.832 3.392 -0.343 -2.087 H12 EKF 42 EKF H13 H13 H 0 1 N N N 31.533 -81.573 8.583 7.648 1.196 -0.912 H13 EKF 43 EKF H14 H14 H 0 1 N N N 33.220 -81.206 9.081 7.459 1.945 0.692 H14 EKF 44 EKF H15 H15 H 0 1 N N N 35.035 -81.403 7.503 8.080 -2.180 0.373 H15 EKF 45 EKF H16 H16 H 0 1 N N N 34.803 -82.507 6.105 6.631 -1.456 -0.365 H16 EKF 46 EKF H17 H17 H 0 1 N N N 34.373 -80.769 5.958 8.236 -1.153 -1.072 H17 EKF 47 EKF H18 H18 H 0 1 N N N 31.044 -82.477 6.488 9.802 0.346 0.119 H18 EKF 48 EKF H19 H19 H 0 1 N N N 31.940 -81.424 5.342 9.336 0.956 1.726 H19 EKF 49 EKF H20 H20 H 0 1 N N N 32.371 -83.161 5.489 9.678 -0.776 1.496 H20 EKF 50 EKF H21 H21 H 0 1 N N N 32.331 -71.328 8.569 -1.691 -2.855 -0.442 H21 EKF 51 EKF H23 H23 H 0 1 N N N 31.783 -71.044 6.154 -2.971 -0.914 -0.504 H23 EKF 52 EKF H24 H24 H 0 1 N N N 27.040 -74.958 3.081 -6.445 -0.228 3.593 H24 EKF 53 EKF H25 H25 H 0 1 N N N 28.877 -72.766 2.534 -5.004 1.253 2.440 H25 EKF 54 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EKF C20 C21 SING N N 1 EKF C20 O19 SING N N 2 EKF C21 C18 SING N N 3 EKF O19 C17 SING N N 4 EKF C18 C17 SING Y N 5 EKF C18 C13 DOUB Y N 6 EKF C17 C16 DOUB Y N 7 EKF C12 C13 SING N N 8 EKF C12 N11 SING N N 9 EKF C13 C14 SING Y N 10 EKF C16 C15 SING Y N 11 EKF N6 C1 SING Y N 12 EKF N6 C5 DOUB Y N 13 EKF C1 C2 DOUB Y N 14 EKF C30 N28 SING N N 15 EKF C14 C15 DOUB Y N 16 EKF N11 C5 SING N N 17 EKF C5 N4 SING Y N 18 EKF C29 N28 SING N N 19 EKF C2 C10 SING N N 20 EKF C2 C3 SING Y N 21 EKF N28 C27 SING N N 22 EKF C22 C10 DOUB Y N 23 EKF C22 C23 SING Y N 24 EKF C10 C26 SING Y N 25 EKF N4 C3 SING Y N 26 EKF N4 C9 SING Y N 27 EKF C23 C24 DOUB Y N 28 EKF C26 C25 DOUB Y N 29 EKF C3 N7 DOUB Y N 30 EKF C24 C25 SING Y N 31 EKF C24 C27 SING N N 32 EKF C9 N8 DOUB Y N 33 EKF N7 N8 SING Y N 34 EKF C1 H1 SING N N 35 EKF C12 H2 SING N N 36 EKF C12 H3 SING N N 37 EKF C14 H4 SING N N 38 EKF C15 H5 SING N N 39 EKF C16 H6 SING N N 40 EKF C20 H7 SING N N 41 EKF C21 H8 SING N N 42 EKF C22 H9 SING N N 43 EKF C23 H10 SING N N 44 EKF C25 H11 SING N N 45 EKF C26 H12 SING N N 46 EKF C27 H13 SING N N 47 EKF C27 H14 SING N N 48 EKF C29 H15 SING N N 49 EKF C29 H16 SING N N 50 EKF C29 H17 SING N N 51 EKF C30 H18 SING N N 52 EKF C30 H19 SING N N 53 EKF C30 H20 SING N N 54 EKF C9 H21 SING N N 55 EKF N11 H23 SING N N 56 EKF C20 H24 SING N N 57 EKF C21 H25 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EKF InChI InChI 1.03 "InChI=1S/C23H24N6O/c1-28(2)14-16-6-8-17(9-7-16)20-13-25-23(29-15-26-27-22(20)29)24-12-18-4-3-5-21-19(18)10-11-30-21/h3-9,13,15H,10-12,14H2,1-2H3,(H,24,25)" EKF InChIKey InChI 1.03 KCSVXFVJXLVYFS-UHFFFAOYSA-N EKF SMILES_CANONICAL CACTVS 3.385 "CN(C)Cc1ccc(cc1)c2cnc(NCc3cccc4OCCc34)n5cnnc25" EKF SMILES CACTVS 3.385 "CN(C)Cc1ccc(cc1)c2cnc(NCc3cccc4OCCc34)n5cnnc25" EKF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)Cc1ccc(cc1)c2cnc(n3c2nnc3)NCc4cccc5c4CCO5" EKF SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)Cc1ccc(cc1)c2cnc(n3c2nnc3)NCc4cccc5c4CCO5" # _pdbx_chem_comp_identifier.comp_id EKF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-[4-[(dimethylamino)methyl]phenyl]-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EKF "Create component" 2020-01-08 PDBJ EKF "Initial release" 2022-04-13 RCSB ##