data_EM4 # _chem_comp.id EM4 _chem_comp.name "N-[(2S,3S,4R)-3,4-dihydroxy-8-oxo-8-[(6-phenylhexyl)amino]-1-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octan-2-yl]hexacosanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C52 H94 N2 O10" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "aGSA[26,6P]" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-01-19 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 907.310 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EM4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6C6E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EM4 C1 C1 C 0 1 N N N -0.090 -9.525 -33.561 -1.688 2.798 0.283 C1 EM4 1 EM4 C2 C2 C 0 1 N N N -1.098 -8.572 -32.872 -0.391 2.673 1.086 C2 EM4 2 EM4 C3 C3 C 0 1 N N N -0.509 -7.977 -31.573 0.715 2.119 0.185 C3 EM4 3 EM4 C4 C4 C 0 1 N N N -1.467 -6.824 -31.145 2.011 1.993 0.988 C4 EM4 4 EM4 C5 C5 C 0 1 N N N -1.203 -6.523 -29.660 3.117 1.440 0.087 C5 EM4 5 EM4 C6 C6 C 0 1 N N N -1.522 -5.048 -29.302 4.414 1.314 0.890 C6 EM4 6 EM4 C7 C7 C 0 1 N N N -3.018 -4.833 -29.070 5.520 0.761 -0.011 C7 EM4 7 EM4 O1 O1 O 0 1 N N N 1.222 -8.153 -26.769 -8.769 -2.388 1.002 O1 EM4 8 EM4 O3 O2 O 0 1 N N N 2.736 -14.225 -30.731 -7.473 4.254 1.762 O3 EM4 9 EM4 O4 O3 O 0 1 N N N 2.206 -13.986 -33.998 -5.271 6.105 0.250 O4 EM4 10 EM4 O5 O4 O 0 1 N N N 4.463 -14.649 -35.233 -7.101 7.479 -1.368 O5 EM4 11 EM4 O6 O5 O 0 1 N N N 4.377 -12.954 -37.606 -5.332 7.874 -3.580 O6 EM4 12 EM4 O7 O6 O 0 1 N N N 1.861 -13.935 -38.540 -3.378 9.302 -2.174 O7 EM4 13 EM4 C52 C8 C 0 1 N N N -4.458 -1.125 -30.613 27.141 -5.351 -0.894 C52 EM4 14 EM4 C51 C9 C 0 1 N N N -5.638 -0.248 -31.011 26.035 -4.798 0.007 C51 EM4 15 EM4 C50 C10 C 0 1 N N N -6.367 -1.097 -32.048 24.739 -4.672 -0.796 C50 EM4 16 EM4 C49 C11 C 0 1 N N N -7.421 -0.254 -32.748 23.633 -4.119 0.105 C49 EM4 17 EM4 C48 C12 C 0 1 N N N -8.675 -0.250 -31.910 22.336 -3.993 -0.698 C48 EM4 18 EM4 C47 C13 C 0 1 N N N -9.598 -1.393 -32.321 21.230 -3.440 0.203 C47 EM4 19 EM4 C46 C14 C 0 1 N N N -10.642 -1.422 -31.207 19.934 -3.314 -0.600 C46 EM4 20 EM4 C45 C15 C 0 1 N N N -11.444 -2.726 -31.302 18.828 -2.760 0.301 C45 EM4 21 EM4 C44 C16 C 0 1 N N N -11.843 -3.291 -29.903 17.532 -2.635 -0.502 C44 EM4 22 EM4 C39 C17 C 0 1 N N N -10.549 -3.617 -29.187 16.426 -2.081 0.399 C39 EM4 23 EM4 C38 C18 C 0 1 N N N -10.768 -4.598 -28.012 15.129 -1.956 -0.403 C38 EM4 24 EM4 C37 C19 C 0 1 N N N -9.335 -5.080 -27.845 14.023 -1.402 0.497 C37 EM4 25 EM4 C36 C20 C 0 1 N N N -9.065 -5.583 -26.449 12.727 -1.276 -0.305 C36 EM4 26 EM4 C35 C21 C 0 1 N N N -7.564 -5.920 -26.465 11.621 -0.723 0.595 C35 EM4 27 EM4 C43 C22 C 0 1 N N N -6.790 -4.713 -25.928 10.324 -0.597 -0.207 C43 EM4 28 EM4 C42 C23 C 0 1 N N N -5.283 -5.016 -26.042 9.218 -0.044 0.694 C42 EM4 29 EM4 C41 C24 C 0 1 N N N -4.794 -4.508 -27.393 7.922 0.082 -0.109 C41 EM4 30 EM4 C40 C25 C 0 1 N N N -3.310 -4.869 -27.548 6.816 0.635 0.792 C40 EM4 31 EM4 C20 C26 C 0 1 N N N -0.043 -10.937 -32.891 -2.777 3.343 1.171 C20 EM4 32 EM4 O O7 O 0 1 N N N -1.079 -11.555 -32.644 -2.540 3.605 2.331 O EM4 33 EM4 N2 N1 N 0 1 N N N 1.169 -11.475 -32.668 -4.015 3.540 0.675 N2 EM4 34 EM4 C27 C27 C 0 1 N N S 1.309 -12.822 -32.044 -5.074 4.069 1.538 C27 EM4 35 EM4 C28 C28 C 0 1 N N N 1.118 -13.960 -33.080 -4.999 5.597 1.558 C28 EM4 36 EM4 C31 C29 C 0 1 N N S 2.066 -14.758 -35.195 -5.226 7.530 0.158 C31 EM4 37 EM4 O9 O8 O 0 1 N N N 0.880 -14.401 -35.936 -3.874 7.974 0.296 O9 EM4 38 EM4 C30 C30 C 0 1 N N R 0.839 -13.078 -36.535 -2.982 7.439 -0.683 C30 EM4 39 EM4 C29 C31 C 0 1 N N N -0.488 -12.803 -37.273 -1.566 7.958 -0.420 C29 EM4 40 EM4 O8 O9 O 0 1 N N N -1.398 -13.884 -37.061 -1.099 7.453 0.832 O8 EM4 41 EM4 C34 C32 C 0 1 N N R 1.989 -12.942 -37.518 -3.435 7.877 -2.078 C34 EM4 42 EM4 C33 C33 C 0 1 N N S 3.279 -13.147 -36.736 -4.874 7.406 -2.310 C33 EM4 43 EM4 C32 C34 C 0 1 N N R 3.312 -14.549 -36.067 -5.770 7.972 -1.203 C32 EM4 44 EM4 C26 C35 C 0 1 N N S 2.671 -12.943 -31.350 -6.437 3.633 0.998 C26 EM4 45 EM4 C25 C36 C 0 1 N N R 2.934 -11.855 -30.282 -6.565 2.112 1.106 C25 EM4 46 EM4 O2 O10 O 0 1 N N N 4.017 -12.357 -29.507 -5.530 1.491 0.342 O2 EM4 47 EM4 C24 C37 C 0 1 N N N 1.761 -11.604 -29.365 -7.929 1.676 0.567 C24 EM4 48 EM4 C23 C38 C 0 1 N N N 2.232 -10.862 -28.098 -8.108 0.172 0.789 C23 EM4 49 EM4 C22 C39 C 0 1 N N N 2.569 -9.403 -28.451 -9.471 -0.264 0.249 C22 EM4 50 EM4 C21 C40 C 0 1 N N N 2.332 -8.509 -27.178 -9.647 -1.745 0.468 C21 EM4 51 EM4 N1 N2 N 0 1 N N N 3.416 -8.106 -26.552 -10.781 -2.355 0.069 N1 EM4 52 EM4 C19 C41 C 0 1 N N N 3.341 -7.235 -25.367 -10.952 -3.794 0.281 C19 EM4 53 EM4 C18 C42 C 0 1 N N N 4.748 -6.918 -24.889 -12.316 -4.231 -0.258 C18 EM4 54 EM4 C17 C43 C 0 1 N N N 5.260 -8.086 -24.055 -12.494 -5.734 -0.036 C17 EM4 55 EM4 C16 C44 C 0 1 N N N 4.889 -7.827 -22.608 -13.858 -6.171 -0.576 C16 EM4 56 EM4 C15 C45 C 0 1 N N N 5.848 -6.789 -21.975 -14.037 -7.674 -0.354 C15 EM4 57 EM4 C14 C46 C 0 1 N N N 6.001 -7.017 -20.472 -15.400 -8.111 -0.894 C14 EM4 58 EM4 C13 C47 C 0 1 Y N N 6.405 -8.394 -19.998 -15.576 -9.591 -0.675 C13 EM4 59 EM4 C12 C48 C 0 1 Y N N 7.223 -9.164 -20.824 -15.159 -10.487 -1.642 C12 EM4 60 EM4 C11 C49 C 0 1 Y N N 7.584 -10.429 -20.425 -15.321 -11.845 -1.441 C11 EM4 61 EM4 C10 C50 C 0 1 Y N N 7.154 -10.962 -19.211 -15.899 -12.307 -0.274 C10 EM4 62 EM4 C9 C51 C 0 1 Y N N 6.329 -10.188 -18.388 -16.315 -11.412 0.693 C9 EM4 63 EM4 C8 C52 C 0 1 Y N N 5.948 -8.901 -18.785 -16.150 -10.054 0.495 C8 EM4 64 EM4 H1 H1 H 0 1 N N N 0.913 -9.076 -33.507 -1.531 3.475 -0.557 H1 EM4 65 EM4 H2 H2 H 0 1 N N N -0.382 -9.645 -34.615 -1.980 1.817 -0.090 H2 EM4 66 EM4 H3 H3 H 0 1 N N N -1.345 -7.752 -33.562 -0.098 3.654 1.460 H3 EM4 67 EM4 H4 H4 H 0 1 N N N -2.012 -9.133 -32.627 -0.548 1.996 1.926 H4 EM4 68 EM4 H5 H5 H 0 1 N N N -0.465 -8.746 -30.788 0.422 1.138 -0.188 H5 EM4 69 EM4 H6 H6 H 0 1 N N N 0.501 -7.583 -31.758 0.872 2.796 -0.655 H6 EM4 70 EM4 H7 H7 H 0 1 N N N -1.268 -5.927 -31.750 2.304 2.975 1.362 H7 EM4 71 EM4 H8 H8 H 0 1 N N N -2.513 -7.135 -31.284 1.854 1.317 1.828 H8 EM4 72 EM4 H9 H9 H 0 1 N N N -1.834 -7.182 -29.046 2.825 0.459 -0.286 H9 EM4 73 EM4 H10 H10 H 0 1 N N N -0.144 -6.721 -29.440 3.274 2.117 -0.753 H10 EM4 74 EM4 H11 H11 H 0 1 N N N -0.977 -4.778 -28.386 4.706 2.296 1.263 H11 EM4 75 EM4 H12 H12 H 0 1 N N N -1.193 -4.401 -30.129 4.257 0.638 1.730 H12 EM4 76 EM4 H13 H13 H 0 1 N N N -3.317 -3.856 -29.479 5.227 -0.220 -0.384 H13 EM4 77 EM4 H14 H14 H 0 1 N N N -3.586 -5.630 -29.572 5.676 1.438 -0.851 H14 EM4 78 EM4 H15 H15 H 0 1 N N N 3.573 -14.324 -30.293 -7.501 3.973 2.687 H15 EM4 79 EM4 H16 H16 H 0 1 N N N 4.484 -15.506 -34.823 -7.724 7.798 -0.700 H16 EM4 80 EM4 H17 H17 H 0 1 N N N 5.187 -13.080 -37.127 -6.238 7.611 -3.793 H17 EM4 81 EM4 H18 H18 H 0 1 N N N 1.053 -13.795 -39.019 -3.657 9.650 -3.031 H18 EM4 82 EM4 H19 H19 H 0 1 N N N -3.852 -0.604 -29.857 27.298 -4.675 -1.734 H19 EM4 83 EM4 H20 H20 H 0 1 N N N -4.830 -2.073 -30.196 28.065 -5.441 -0.322 H20 EM4 84 EM4 H21 H21 H 0 1 N N N -3.840 -1.332 -31.499 26.849 -6.332 -1.268 H21 EM4 85 EM4 H22 H22 H 0 1 N N N -5.295 0.701 -31.449 25.878 -5.474 0.847 H22 EM4 86 EM4 H23 H23 H 0 1 N N N -6.285 -0.040 -30.146 26.328 -3.816 0.380 H23 EM4 87 EM4 H24 H24 H 0 1 N N N -6.852 -1.949 -31.548 24.896 -3.996 -1.636 H24 EM4 88 EM4 H25 H25 H 0 1 N N N -5.645 -1.470 -32.789 24.446 -5.653 -1.170 H25 EM4 89 EM4 H26 H26 H 0 1 N N N -7.052 0.776 -32.867 23.476 -4.795 0.945 H26 EM4 90 EM4 H27 H27 H 0 1 N N N -7.639 -0.682 -33.738 23.926 -3.137 0.478 H27 EM4 91 EM4 H28 H28 H 0 1 N N N -8.403 -0.368 -30.851 22.493 -3.316 -1.538 H28 EM4 92 EM4 H29 H29 H 0 1 N N N -9.200 0.707 -32.049 22.044 -4.974 -1.071 H29 EM4 93 EM4 H30 H30 H 0 1 N N N -10.067 -1.190 -33.295 21.073 -4.116 1.043 H30 EM4 94 EM4 H31 H31 H 0 1 N N N -9.048 -2.345 -32.370 21.523 -2.458 0.576 H31 EM4 95 EM4 H32 H32 H 0 1 N N N -10.139 -1.370 -30.230 20.091 -2.637 -1.440 H32 EM4 96 EM4 H33 H33 H 0 1 N N N -11.321 -0.564 -31.317 19.641 -4.295 -0.973 H33 EM4 97 EM4 H34 H34 H 0 1 N N N -12.361 -2.534 -31.879 18.671 -3.437 1.141 H34 EM4 98 EM4 H35 H35 H 0 1 N N N -10.833 -3.477 -31.824 19.121 -1.779 0.675 H35 EM4 99 EM4 H36 H36 H 0 1 N N N -12.411 -2.538 -29.337 17.689 -1.958 -1.342 H36 EM4 100 EM4 H37 H37 H 0 1 N N N -12.452 -4.199 -30.020 17.239 -3.616 -0.875 H37 EM4 101 EM4 H38 H38 H 0 1 N N N -9.851 -4.073 -29.905 16.269 -2.758 1.239 H38 EM4 102 EM4 H39 H39 H 0 1 N N N -10.115 -2.685 -28.795 16.718 -1.100 0.773 H39 EM4 103 EM4 H40 H40 H 0 1 N N N -11.141 -4.088 -27.111 15.286 -1.279 -1.243 H40 EM4 104 EM4 H41 H41 H 0 1 N N N -11.452 -5.417 -28.279 14.837 -2.937 -0.777 H41 EM4 105 EM4 H42 H42 H 0 1 N N N -9.150 -5.897 -28.558 13.866 -2.079 1.337 H42 EM4 106 EM4 H43 H43 H 0 1 N N N -8.652 -4.244 -28.059 14.316 -0.421 0.871 H43 EM4 107 EM4 H44 H44 H 0 1 N N N -9.284 -4.805 -25.703 12.884 -0.600 -1.145 H44 EM4 108 EM4 H45 H45 H 0 1 N N N -9.666 -6.479 -26.232 12.434 -2.258 -0.679 H45 EM4 109 EM4 H46 H46 H 0 1 N N N -7.374 -6.796 -25.828 11.464 -1.400 1.436 H46 EM4 110 EM4 H47 H47 H 0 1 N N N -7.244 -6.138 -27.494 11.913 0.258 0.969 H47 EM4 111 EM4 H48 H48 H 0 1 N N N -7.036 -3.820 -26.521 10.481 0.079 -1.047 H48 EM4 112 EM4 H49 H49 H 0 1 N N N -7.056 -4.539 -24.875 10.032 -1.579 -0.581 H49 EM4 113 EM4 H50 H50 H 0 1 N N N -5.115 -6.101 -25.969 9.061 -0.720 1.534 H50 EM4 114 EM4 H51 H51 H 0 1 N N N -4.739 -4.506 -25.234 9.511 0.937 1.067 H51 EM4 115 EM4 H52 H52 H 0 1 N N N -4.916 -3.416 -27.444 8.079 0.758 -0.949 H52 EM4 116 EM4 H53 H53 H 0 1 N N N -5.376 -4.980 -28.198 7.629 -0.900 -0.483 H53 EM4 117 EM4 H54 H54 H 0 1 N N N -3.117 -5.874 -27.146 7.109 1.617 1.165 H54 EM4 118 EM4 H55 H55 H 0 1 N N N -2.681 -4.136 -27.021 6.659 -0.041 1.632 H55 EM4 119 EM4 H56 H56 H 0 1 N N N 1.989 -10.964 -32.925 -4.205 3.330 -0.253 H56 EM4 120 EM4 H57 H57 H 0 1 N N N 0.528 -12.933 -31.278 -4.944 3.686 2.550 H57 EM4 121 EM4 H58 H58 H 0 1 N N N 0.182 -13.793 -33.633 -4.001 5.908 1.867 H58 EM4 122 EM4 H59 H59 H 0 1 N N N 1.066 -14.924 -32.553 -5.735 5.988 2.260 H59 EM4 123 EM4 H60 H60 H 0 1 N N N 2.015 -15.825 -34.932 -5.834 7.965 0.951 H60 EM4 124 EM4 H61 H61 H 0 1 N N N 0.959 -12.318 -35.749 -2.987 6.351 -0.624 H61 EM4 125 EM4 H62 H62 H 0 1 N N N -0.291 -12.699 -38.350 -0.903 7.623 -1.217 H62 EM4 126 EM4 H63 H63 H 0 1 N N N -0.932 -11.872 -36.890 -1.578 9.047 -0.392 H63 EM4 127 EM4 H64 H64 H 0 1 N N N -2.212 -13.708 -37.518 -0.206 7.742 1.064 H64 EM4 128 EM4 H65 H65 H 0 1 N N N 1.982 -11.932 -37.953 -2.782 7.436 -2.830 H65 EM4 129 EM4 H66 H66 H 0 1 N N N 3.312 -12.395 -35.934 -4.909 6.317 -2.288 H66 EM4 130 EM4 H67 H67 H 0 1 N N N 3.335 -15.318 -36.853 -5.774 9.060 -1.259 H67 EM4 131 EM4 H68 H68 H 0 1 N N N 3.455 -12.863 -32.117 -6.527 3.932 -0.046 H68 EM4 132 EM4 H69 H69 H 0 1 N N N 3.215 -10.918 -30.785 -6.475 1.813 2.151 H69 EM4 133 EM4 H70 H70 H 0 1 N N N 4.234 -11.733 -28.824 -5.549 1.713 -0.599 H70 EM4 134 EM4 H71 H71 H 0 1 N N N 1.013 -10.991 -29.889 -8.717 2.216 1.090 H71 EM4 135 EM4 H72 H72 H 0 1 N N N 1.311 -12.566 -29.078 -7.985 1.895 -0.500 H72 EM4 136 EM4 H73 H73 H 0 1 N N N 1.432 -10.881 -27.344 -7.319 -0.369 0.265 H73 EM4 137 EM4 H74 H74 H 0 1 N N N 3.128 -11.358 -27.695 -8.052 -0.047 1.855 H74 EM4 138 EM4 H75 H75 H 0 1 N N N 3.621 -9.331 -28.763 -10.259 0.276 0.773 H75 EM4 139 EM4 H76 H76 H 0 1 N N N 1.919 -9.061 -29.270 -9.527 -0.045 -0.817 H76 EM4 140 EM4 H77 H77 H 0 1 N N N 4.311 -8.398 -26.888 -11.484 -1.841 -0.359 H77 EM4 141 EM4 H78 H78 H 0 1 N N N 2.823 -6.301 -25.629 -10.164 -4.335 -0.243 H78 EM4 142 EM4 H79 H79 H 0 1 N N N 2.788 -7.749 -24.567 -10.896 -4.013 1.348 H79 EM4 143 EM4 H80 H80 H 0 1 N N N 5.407 -6.766 -25.756 -13.104 -3.690 0.266 H80 EM4 144 EM4 H81 H81 H 0 1 N N N 4.733 -6.005 -24.276 -12.372 -4.012 -1.325 H81 EM4 145 EM4 H82 H82 H 0 1 N N N 4.795 -9.022 -24.398 -11.706 -6.275 -0.560 H82 EM4 146 EM4 H83 H83 H 0 1 N N N 6.353 -8.163 -24.152 -12.439 -5.953 1.030 H83 EM4 147 EM4 H84 H84 H 0 1 N N N 3.859 -7.442 -22.562 -14.646 -5.630 -0.052 H84 EM4 148 EM4 H85 H85 H 0 1 N N N 4.954 -8.769 -22.044 -13.914 -5.952 -1.642 H85 EM4 149 EM4 H86 H86 H 0 1 N N N 6.835 -6.875 -22.453 -13.248 -8.215 -0.878 H86 EM4 150 EM4 H87 H87 H 0 1 N N N 5.446 -5.779 -22.145 -13.981 -7.893 0.712 H87 EM4 151 EM4 H88 H88 H 0 1 N N N 6.763 -6.311 -20.110 -16.188 -7.570 -0.370 H88 EM4 152 EM4 H89 H89 H 0 1 N N N 5.033 -6.782 -20.006 -15.456 -7.891 -1.960 H89 EM4 153 EM4 H90 H90 H 0 1 N N N 7.570 -8.770 -21.768 -14.708 -10.126 -2.554 H90 EM4 154 EM4 H91 H91 H 0 1 N N N 8.216 -11.024 -21.068 -14.996 -12.545 -2.197 H91 EM4 155 EM4 H92 H92 H 0 1 N N N 7.453 -11.956 -18.911 -16.026 -13.368 -0.118 H92 EM4 156 EM4 H93 H93 H 0 1 N N N 5.985 -10.584 -17.444 -16.767 -11.773 1.605 H93 EM4 157 EM4 H94 H94 H 0 1 N N N 5.304 -8.306 -18.155 -16.471 -9.354 1.252 H94 EM4 158 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EM4 O7 C34 SING N N 1 EM4 O6 C33 SING N N 2 EM4 C34 C33 SING N N 3 EM4 C34 C30 SING N N 4 EM4 C29 O8 SING N N 5 EM4 C29 C30 SING N N 6 EM4 C33 C32 SING N N 7 EM4 C30 O9 SING N N 8 EM4 C32 O5 SING N N 9 EM4 C32 C31 SING N N 10 EM4 O9 C31 SING N N 11 EM4 C31 O4 SING N N 12 EM4 O4 C28 SING N N 13 EM4 C1 C20 SING N N 14 EM4 C1 C2 SING N N 15 EM4 C28 C27 SING N N 16 EM4 C20 N2 SING N N 17 EM4 C20 O DOUB N N 18 EM4 C2 C3 SING N N 19 EM4 C49 C50 SING N N 20 EM4 C49 C48 SING N N 21 EM4 N2 C27 SING N N 22 EM4 C47 C48 SING N N 23 EM4 C47 C46 SING N N 24 EM4 C50 C51 SING N N 25 EM4 C27 C26 SING N N 26 EM4 C3 C4 SING N N 27 EM4 C26 O3 SING N N 28 EM4 C26 C25 SING N N 29 EM4 C45 C46 SING N N 30 EM4 C45 C44 SING N N 31 EM4 C4 C5 SING N N 32 EM4 C51 C52 SING N N 33 EM4 C25 O2 SING N N 34 EM4 C25 C24 SING N N 35 EM4 C44 C39 SING N N 36 EM4 C5 C6 SING N N 37 EM4 C24 C23 SING N N 38 EM4 C6 C7 SING N N 39 EM4 C39 C38 SING N N 40 EM4 C7 C40 SING N N 41 EM4 C22 C23 SING N N 42 EM4 C22 C21 SING N N 43 EM4 C38 C37 SING N N 44 EM4 C37 C36 SING N N 45 EM4 C40 C41 SING N N 46 EM4 C41 C42 SING N N 47 EM4 C21 O1 DOUB N N 48 EM4 C21 N1 SING N N 49 EM4 N1 C19 SING N N 50 EM4 C35 C36 SING N N 51 EM4 C35 C43 SING N N 52 EM4 C42 C43 SING N N 53 EM4 C19 C18 SING N N 54 EM4 C18 C17 SING N N 55 EM4 C17 C16 SING N N 56 EM4 C16 C15 SING N N 57 EM4 C15 C14 SING N N 58 EM4 C12 C11 DOUB Y N 59 EM4 C12 C13 SING Y N 60 EM4 C14 C13 SING N N 61 EM4 C11 C10 SING Y N 62 EM4 C13 C8 DOUB Y N 63 EM4 C10 C9 DOUB Y N 64 EM4 C8 C9 SING Y N 65 EM4 C1 H1 SING N N 66 EM4 C1 H2 SING N N 67 EM4 C2 H3 SING N N 68 EM4 C2 H4 SING N N 69 EM4 C3 H5 SING N N 70 EM4 C3 H6 SING N N 71 EM4 C4 H7 SING N N 72 EM4 C4 H8 SING N N 73 EM4 C5 H9 SING N N 74 EM4 C5 H10 SING N N 75 EM4 C6 H11 SING N N 76 EM4 C6 H12 SING N N 77 EM4 C7 H13 SING N N 78 EM4 C7 H14 SING N N 79 EM4 O3 H15 SING N N 80 EM4 O5 H16 SING N N 81 EM4 O6 H17 SING N N 82 EM4 O7 H18 SING N N 83 EM4 C52 H19 SING N N 84 EM4 C52 H20 SING N N 85 EM4 C52 H21 SING N N 86 EM4 C51 H22 SING N N 87 EM4 C51 H23 SING N N 88 EM4 C50 H24 SING N N 89 EM4 C50 H25 SING N N 90 EM4 C49 H26 SING N N 91 EM4 C49 H27 SING N N 92 EM4 C48 H28 SING N N 93 EM4 C48 H29 SING N N 94 EM4 C47 H30 SING N N 95 EM4 C47 H31 SING N N 96 EM4 C46 H32 SING N N 97 EM4 C46 H33 SING N N 98 EM4 C45 H34 SING N N 99 EM4 C45 H35 SING N N 100 EM4 C44 H36 SING N N 101 EM4 C44 H37 SING N N 102 EM4 C39 H38 SING N N 103 EM4 C39 H39 SING N N 104 EM4 C38 H40 SING N N 105 EM4 C38 H41 SING N N 106 EM4 C37 H42 SING N N 107 EM4 C37 H43 SING N N 108 EM4 C36 H44 SING N N 109 EM4 C36 H45 SING N N 110 EM4 C35 H46 SING N N 111 EM4 C35 H47 SING N N 112 EM4 C43 H48 SING N N 113 EM4 C43 H49 SING N N 114 EM4 C42 H50 SING N N 115 EM4 C42 H51 SING N N 116 EM4 C41 H52 SING N N 117 EM4 C41 H53 SING N N 118 EM4 C40 H54 SING N N 119 EM4 C40 H55 SING N N 120 EM4 N2 H56 SING N N 121 EM4 C27 H57 SING N N 122 EM4 C28 H58 SING N N 123 EM4 C28 H59 SING N N 124 EM4 C31 H60 SING N N 125 EM4 C30 H61 SING N N 126 EM4 C29 H62 SING N N 127 EM4 C29 H63 SING N N 128 EM4 O8 H64 SING N N 129 EM4 C34 H65 SING N N 130 EM4 C33 H66 SING N N 131 EM4 C32 H67 SING N N 132 EM4 C26 H68 SING N N 133 EM4 C25 H69 SING N N 134 EM4 O2 H70 SING N N 135 EM4 C24 H71 SING N N 136 EM4 C24 H72 SING N N 137 EM4 C23 H73 SING N N 138 EM4 C23 H74 SING N N 139 EM4 C22 H75 SING N N 140 EM4 C22 H76 SING N N 141 EM4 N1 H77 SING N N 142 EM4 C19 H78 SING N N 143 EM4 C19 H79 SING N N 144 EM4 C18 H80 SING N N 145 EM4 C18 H81 SING N N 146 EM4 C17 H82 SING N N 147 EM4 C17 H83 SING N N 148 EM4 C16 H84 SING N N 149 EM4 C16 H85 SING N N 150 EM4 C15 H86 SING N N 151 EM4 C15 H87 SING N N 152 EM4 C14 H88 SING N N 153 EM4 C14 H89 SING N N 154 EM4 C12 H90 SING N N 155 EM4 C11 H91 SING N N 156 EM4 C10 H92 SING N N 157 EM4 C9 H93 SING N N 158 EM4 C8 H94 SING N N 159 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EM4 SMILES ACDLabs 12.01 "C(C(NC(C(O)C(O)CCCC(=O)NCCCCCCc1ccccc1)COC2OC(CO)C(O)C(O)C2O)=O)CCCCCCCCCCCCCCCCCCCCCCCC" EM4 InChI InChI 1.03 "InChI=1S/C52H94N2O10/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-30-37-47(58)54-43(41-63-52-51(62)50(61)49(60)45(40-55)64-52)48(59)44(56)36-32-38-46(57)53-39-31-25-24-27-33-42-34-28-26-29-35-42/h26,28-29,34-35,43-45,48-52,55-56,59-62H,2-25,27,30-33,36-41H2,1H3,(H,53,57)(H,54,58)/t43-,44+,45+,48-,49-,50-,51+,52-/m0/s1" EM4 InChIKey InChI 1.03 CDZMLEFFZGLIAZ-PWIBDSRESA-N EM4 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O)[C@H](O)[C@H](O)CCCC(=O)NCCCCCCc2ccccc2" EM4 SMILES CACTVS 3.385 "CCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[CH](CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O)[CH](O)[CH](O)CCCC(=O)NCCCCCCc2ccccc2" EM4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O)[C@@H]([C@@H](CCCC(=O)NCCCCCCc2ccccc2)O)O" EM4 SMILES "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCCCCCCCCCCCC(=O)NC(COC1C(C(C(C(O1)CO)O)O)O)C(C(CCCC(=O)NCCCCCCc2ccccc2)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EM4 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S,3S,4R)-3,4-dihydroxy-8-oxo-8-[(6-phenylhexyl)amino]-1-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octan-2-yl]hexacosanamide (non-preferred name)" EM4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[(2~{S},3~{S},4~{R})-1-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,4-bis(oxidanyl)-8-oxidanylidene-8-(6-phenylhexylamino)octan-2-yl]hexacosanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EM4 "Create component" 2018-01-19 RCSB EM4 "Modify name" 2018-01-19 RCSB EM4 "Initial release" 2019-01-30 RCSB EM4 "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EM4 _pdbx_chem_comp_synonyms.name "aGSA[26,6P]" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##