data_ENP # _chem_comp.id ENP _chem_comp.name ETHENO-NADP _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C17 H24 N5 O17 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-12-06 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 663.317 _chem_comp.one_letter_code N _chem_comp.three_letter_code ENP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ENP P1 P1 P 0 1 N N R 9.238 7.594 85.898 2.058 -0.268 -0.530 P1 ENP 1 ENP O1 O1 O 0 1 N N N 8.862 6.360 85.117 1.600 0.246 -1.985 O1 ENP 2 ENP O2 O2 O 0 1 N N N 8.457 7.536 87.182 2.579 -1.649 -0.636 O2 ENP 3 ENP "O5'" O5* O 0 1 N N N 8.824 8.896 85.085 0.795 -0.246 0.469 "O5'" ENP 4 ENP "C5'" C5* C 0 1 N N N 9.312 9.054 83.698 -0.140 -1.206 -0.027 "C5'" ENP 5 ENP "C4'" C4* C 0 1 N N R 9.395 10.518 83.128 -1.371 -1.236 0.882 "C4'" ENP 6 ENP "O4'" O4* O 0 1 N N N 10.587 11.193 83.612 -2.079 0.011 0.786 "O4'" ENP 7 ENP "C3'" C3* C 0 1 N N R 9.454 10.619 81.589 -2.333 -2.349 0.424 "C3'" ENP 8 ENP "O3'" O3* O 0 1 N N N 8.550 11.474 81.111 -2.533 -3.306 1.467 "O3'" ENP 9 ENP "C2'" C2* C 0 1 N N R 10.923 11.031 81.274 -3.656 -1.600 0.115 "C2'" ENP 10 ENP "O2'" O2* O 0 1 N N N 11.048 11.837 80.036 -4.783 -2.344 0.581 "O2'" ENP 11 ENP "C1'" C1* C 0 1 N N R 11.431 11.748 82.562 -3.484 -0.290 0.926 "C1'" ENP 12 ENP N9 N9 N 0 1 Y N N 12.871 11.453 82.893 -4.302 0.784 0.357 N9 ENP 13 ENP C8 C8 C 0 1 Y N N 13.742 12.364 83.533 -3.912 1.674 -0.597 C8 ENP 14 ENP N7 N7 N 0 1 Y N N 15.045 11.898 83.764 -4.893 2.488 -0.867 N7 ENP 15 ENP C5 C5 C 0 1 Y N N 14.881 10.683 83.229 -5.962 2.170 -0.106 C5 ENP 16 ENP C6 C6 C 0 1 Y N N 15.946 9.690 83.175 -7.317 2.702 0.040 C6 ENP 17 ENP N6 N6 N 0 1 Y N N 17.159 9.988 83.680 -7.980 3.689 -0.525 N6 ENP 18 ENP N1 N1 N 0 1 Y N N 15.606 8.515 82.600 -8.147 2.089 0.949 N1 ENP 19 ENP C2 C2 C 0 1 Y N N 14.358 8.142 82.053 -7.694 1.028 1.672 C2 ENP 20 ENP N3 N3 N 0 1 Y N N 13.381 9.057 82.102 -6.490 0.555 1.543 N3 ENP 21 ENP C4 C4 C 0 1 Y N N 13.660 10.316 82.690 -5.603 1.074 0.683 C4 ENP 22 ENP O3 O3 O 0 1 N N N 10.820 7.604 86.163 3.211 0.698 0.043 O3 ENP 23 ENP P2 P2 P 0 1 N N S 12.116 6.768 85.705 4.561 0.334 -0.755 P2 ENP 24 ENP O4 O4 O 0 1 N N N 12.116 6.558 84.204 4.542 1.050 -2.197 O4 ENP 25 ENP O5 O5 O 0 1 N N N 12.159 5.397 86.343 4.649 -1.132 -0.933 O5 ENP 26 ENP "O9'" O9* O 0 1 N N N 13.449 7.589 86.065 5.836 0.851 0.083 "O9'" ENP 27 ENP "C0'" C0* C 0 1 N N N 14.568 7.020 86.858 6.999 0.397 -0.613 "C0'" ENP 28 ENP "C9'" C9* C 0 1 N N R 15.984 7.407 86.288 8.252 0.856 0.135 "C9'" ENP 29 ENP "O8'" O8* O 0 1 N N N 16.159 8.837 86.127 8.341 0.198 1.418 "O8'" ENP 30 ENP "C8'" C8* C 0 1 N N S 17.261 6.951 87.086 9.524 0.418 -0.623 "C8'" ENP 31 ENP "O7'" O7* O 0 1 N N N 18.175 6.491 86.218 10.035 1.497 -1.409 "O7'" ENP 32 ENP "C7'" C7* C 0 1 N N R 17.672 8.280 87.800 10.521 0.045 0.500 "C7'" ENP 33 ENP "O6'" O6* O 0 1 N N N 18.923 8.264 88.292 11.679 0.881 0.439 "O6'" ENP 34 ENP "C6'" C6* C 0 1 N N R 17.452 9.166 86.641 9.730 0.300 1.802 "C6'" ENP 35 ENP P3 P3 P 0 1 N N N 10.574 11.250 78.662 -5.792 -2.488 -0.666 P3 ENP 36 ENP O7 O7 O 0 1 N N N 9.086 11.471 78.523 -7.029 -3.431 -0.248 O7 ENP 37 ENP O8 O8 O 0 1 N N N 11.226 11.945 77.506 -6.343 -1.034 -1.082 O8 ENP 38 ENP O9 O9 O 0 1 N N N 10.817 9.769 78.531 -5.077 -3.092 -1.812 O9 ENP 39 ENP C1 C1 C 0 1 Y N N 17.703 8.753 83.356 -9.215 3.740 -0.012 C1 ENP 40 ENP C9 C9 C 0 1 Y N N 16.782 7.868 82.714 -9.342 2.757 0.904 C9 ENP 41 ENP O6 O6 O 0 1 N N N 17.608 10.585 86.555 10.050 -0.692 2.780 O6 ENP 42 ENP HO1 HO1 H 0 1 N N N 9.355 6.397 84.306 1.268 1.147 -1.871 HO1 ENP 43 ENP "H5'" 1H5* H 0 1 N N N 8.696 8.424 83.014 -0.442 -0.931 -1.038 "H5'" ENP 44 ENP "H5''" 2H5* H 0 0 N N N 10.306 8.560 83.596 0.324 -2.192 -0.042 "H5''" ENP 45 ENP "H4'" H4* H 0 1 N N N 8.448 10.989 83.482 -1.065 -1.410 1.913 "H4'" ENP 46 ENP "H3'" H3* H 0 1 N N N 9.195 9.657 81.089 -1.952 -2.837 -0.473 "H3'" ENP 47 ENP HO3 HO3 H 0 1 N Y N 8.586 11.536 80.164 -1.681 -3.739 1.615 HO3 ENP 48 ENP "H2'" H2* H 0 1 N N N 11.561 10.146 81.043 -3.745 -1.388 -0.950 "H2'" ENP 49 ENP "H1'" H1* H 0 1 N N N 11.377 12.855 82.440 -3.740 -0.451 1.974 "H1'" ENP 50 ENP H8 H8 H 0 1 N N N 13.424 13.377 83.834 -2.936 1.701 -1.059 H8 ENP 51 ENP H2 H2 H 0 1 N N N 14.151 7.159 81.598 -8.361 0.560 2.382 H2 ENP 52 ENP HO4 HO4 H 0 1 N N N 12.881 6.064 83.934 4.484 2.002 -2.037 HO4 ENP 53 ENP "H0'1" 1H0* H 0 0 N N N 14.466 5.914 86.954 7.004 0.812 -1.620 "H0'1" ENP 54 ENP "H0'2" 2H0* H 0 0 N N N 14.480 7.305 87.932 6.987 -0.692 -0.668 "H0'2" ENP 55 ENP "H9'" H9* H 0 1 N N N 15.942 6.838 85.330 8.240 1.939 0.264 "H9'" ENP 56 ENP "H8'" H8* H 0 1 N N N 17.123 6.118 87.815 9.315 -0.447 -1.252 "H8'" ENP 57 ENP "HO'7" 7HO* H 0 0 N N N 18.946 6.216 86.700 10.825 1.166 -1.857 "HO'7" ENP 58 ENP "H7'" H7* H 0 1 N N N 17.122 8.557 88.729 10.805 -1.004 0.426 "H7'" ENP 59 ENP "HO'6" 6HO* H 0 0 N N N 19.173 9.071 88.726 12.262 0.604 1.159 "HO'6" ENP 60 ENP "H6'" H6* H 0 1 N N N 18.400 8.929 86.104 9.945 1.296 2.188 "H6'" ENP 61 ENP HO7 HO7 H 0 1 N N N 8.799 11.115 77.690 -7.608 -3.491 -1.021 HO7 ENP 62 ENP HO8 HO8 H 0 1 N N N 10.939 11.589 76.673 -6.801 -0.676 -0.309 HO8 ENP 63 ENP H1 H1 H 0 1 N N N 18.753 8.502 83.584 -9.982 4.449 -0.286 H1 ENP 64 ENP H9 H9 H 0 1 N N N 16.954 6.838 82.359 -10.222 2.538 1.491 H9 ENP 65 ENP HO6 HO6 H 0 1 N N N 18.467 10.804 86.897 9.511 -0.499 3.559 HO6 ENP 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ENP P1 O1 SING N N 1 ENP P1 O2 DOUB N N 2 ENP P1 "O5'" SING N N 3 ENP P1 O3 SING N N 4 ENP O1 HO1 SING N N 5 ENP "O5'" "C5'" SING N N 6 ENP "C5'" "C4'" SING N N 7 ENP "C5'" "H5'" SING N N 8 ENP "C5'" "H5''" SING N N 9 ENP "C4'" "O4'" SING N N 10 ENP "C4'" "C3'" SING N N 11 ENP "C4'" "H4'" SING N N 12 ENP "O4'" "C1'" SING N N 13 ENP "C3'" "O3'" SING N N 14 ENP "C3'" "C2'" SING N N 15 ENP "C3'" "H3'" SING N N 16 ENP "O3'" HO3 SING N N 17 ENP "C2'" "O2'" SING N N 18 ENP "C2'" "C1'" SING N N 19 ENP "C2'" "H2'" SING N N 20 ENP "O2'" P3 SING N N 21 ENP "C1'" N9 SING N N 22 ENP "C1'" "H1'" SING N N 23 ENP N9 C8 SING Y N 24 ENP N9 C4 SING Y N 25 ENP C8 N7 DOUB Y N 26 ENP C8 H8 SING N N 27 ENP N7 C5 SING Y N 28 ENP C5 C6 SING Y N 29 ENP C5 C4 DOUB Y N 30 ENP C6 N6 DOUB Y N 31 ENP C6 N1 SING Y N 32 ENP N6 C1 SING Y N 33 ENP N1 C2 SING Y N 34 ENP N1 C9 SING Y N 35 ENP C2 N3 DOUB Y N 36 ENP C2 H2 SING N N 37 ENP N3 C4 SING Y N 38 ENP O3 P2 SING N N 39 ENP P2 O4 SING N N 40 ENP P2 O5 DOUB N N 41 ENP P2 "O9'" SING N N 42 ENP O4 HO4 SING N N 43 ENP "O9'" "C0'" SING N N 44 ENP "C0'" "C9'" SING N N 45 ENP "C0'" "H0'1" SING N N 46 ENP "C0'" "H0'2" SING N N 47 ENP "C9'" "O8'" SING N N 48 ENP "C9'" "C8'" SING N N 49 ENP "C9'" "H9'" SING N N 50 ENP "O8'" "C6'" SING N N 51 ENP "C8'" "O7'" SING N N 52 ENP "C8'" "C7'" SING N N 53 ENP "C8'" "H8'" SING N N 54 ENP "O7'" "HO'7" SING N N 55 ENP "C7'" "O6'" SING N N 56 ENP "C7'" "C6'" SING N N 57 ENP "C7'" "H7'" SING N N 58 ENP "O6'" "HO'6" SING N N 59 ENP "C6'" O6 SING N N 60 ENP "C6'" "H6'" SING N N 61 ENP P3 O7 SING N N 62 ENP P3 O8 SING N N 63 ENP P3 O9 DOUB N N 64 ENP O7 HO7 SING N N 65 ENP O8 HO8 SING N N 66 ENP C1 C9 DOUB Y N 67 ENP C1 H1 SING N N 68 ENP C9 H9 SING N N 69 ENP O6 HO6 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ENP SMILES ACDLabs 10.04 "O=P(O)(O)OC4C(O)C(OC4n2c3ncn1ccnc1c3nc2)COP(=O)(O)OP(=O)(O)OCC5OC(O)C(O)C5O" ENP SMILES_CANONICAL CACTVS 3.341 "O[C@@H]1O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)OC[C@H]2O[C@H]([C@H](O[P](O)(O)=O)[C@@H]2O)n3cnc4c5nccn5cnc34)[C@@H](O)[C@H]1O" ENP SMILES CACTVS 3.341 "O[CH]1O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O[P](O)(O)=O)[CH]2O)n3cnc4c5nccn5cnc34)[CH](O)[CH]1O" ENP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cn2cnc3c(c2n1)ncn3[C@H]4[C@@H]([C@@H]([C@H](O4)CO[P@@](=O)(O)O[P@@](=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)O)O)O)O)OP(=O)(O)O" ENP SMILES "OpenEye OEToolkits" 1.5.0 "c1cn2cnc3c(c2n1)ncn3C4C(C(C(O4)COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)O)O)O)O)OP(=O)(O)O" ENP InChI InChI 1.03 ;InChI=1S/C17H24N5O17P3/c23-10-7(37-17(26)12(10)25)3-34-41(30,31)39-42(32,33)35-4-8-11(24)13(38-40(27,28)29)16(36-8)22-6-19-9-14-18-1-2-21(14)5-20-15(9)22/h1-2,5-8,10-13,16-17,23-26H,3-4H2,(H,30,31)(H,32,33)(H2,27,28,29)/t7-,8-,10-,11-,12-,13-,16-,17-/m1/s1 ; ENP InChIKey InChI 1.03 KWEQFQACRLGUSH-QJWJOKBXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ENP "SYSTEMATIC NAME" ACDLabs 10.04 "[(2R,3R,4R,5R)-3-hydroxy-5-(3H-imidazo[2,1-i]purin-3-yl)-4-(phosphonooxy)tetrahydrofuran-2-yl]methyl [(2R,3S,4R,5R)-3,4,5-trihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" ENP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5R)-3-hydroxy-5-imidazo[2,1-f]purin-3-yl-4-phosphonooxy-oxolan-2-yl]methyl [hydroxy-[[(2R,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ENP "Create component" 2001-12-06 RCSB ENP "Modify descriptor" 2011-06-04 RCSB #