data_EO6 # _chem_comp.id EO6 _chem_comp.name "(1R,2S)-2-[(N-{[(7-cyano-7-azaspiro[3.5]nonan-2-yl)oxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H37 N5 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-10 _chem_comp.pdbx_modified_date 2021-12-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 543.634 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7T4A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EO6 C02 C1 C 0 1 N N N 5.318 29.867 21.841 -10.189 0.984 -0.007 C02 EO6 1 EO6 C04 C2 C 0 1 N N N 7.336 29.614 23.718 -8.352 0.356 -1.506 C04 EO6 2 EO6 C05 C3 C 0 1 N N N 8.884 29.317 23.809 -7.360 -0.763 -1.172 C05 EO6 3 EO6 C06 C4 C 0 1 N N N 9.148 27.821 23.624 -6.304 -0.225 -0.208 C06 EO6 4 EO6 C07 C5 C 0 1 N N N 9.052 27.008 24.997 -5.291 0.716 -0.874 C07 EO6 5 EO6 C12 C6 C 0 1 N N S 12.537 22.074 26.577 0.582 -0.414 0.194 C12 EO6 6 EO6 C13 C7 C 0 1 N N N 13.782 21.799 27.558 0.803 -1.801 0.801 C13 EO6 7 EO6 C14 C8 C 0 1 N N N 15.138 22.368 26.955 -0.318 -2.107 1.796 C14 EO6 8 EO6 C16 C9 C 0 1 N N N 15.355 22.001 25.442 -0.167 -3.540 2.310 C16 EO6 9 EO6 C17 C10 C 0 1 N N N 11.148 21.602 27.226 1.749 -0.062 -0.692 C17 EO6 10 EO6 C19 C11 C 0 1 N N S 9.194 19.870 27.211 4.126 0.346 -1.037 C19 EO6 11 EO6 C20 C12 C 0 1 N N N 8.142 19.837 26.075 5.178 1.099 -0.220 C20 EO6 12 EO6 C21 C13 C 0 1 N N S 8.073 21.212 25.299 4.591 2.425 0.269 C21 EO6 13 EO6 C22 C14 C 0 1 N N N 6.953 21.078 24.225 5.612 3.188 1.084 C22 EO6 14 EO6 O26 O1 O 0 1 N N N 7.070 20.379 23.229 6.317 2.704 1.944 O26 EO6 15 EO6 SG S1 S 0 1 N Y N 10.493 17.503 26.639 5.179 -2.049 -0.240 SG EO6 16 EO6 C10 C15 C 0 1 N N N 11.454 24.140 25.402 -1.838 -0.205 0.000 C10 EO6 17 EO6 O09 O2 O 0 1 N N N 11.256 25.590 25.401 -2.970 -0.209 -0.729 O09 EO6 18 EO6 C24 C16 C 0 1 N N N 6.161 22.593 25.916 4.646 4.742 -0.347 C24 EO6 19 EO6 C08 C17 C 0 1 N N N 10.289 26.132 24.445 -4.213 0.029 -0.018 C08 EO6 20 EO6 C15 C18 C 0 1 N N N 16.352 21.918 27.863 -0.235 -1.133 2.973 C15 EO6 21 EO6 C25 C19 C 0 1 N N N 7.640 22.194 26.347 4.287 3.356 -0.927 C25 EO6 22 EO6 C27 C20 C 0 1 N N R 9.420 18.394 27.784 4.741 -0.935 -1.603 C27 EO6 23 EO6 C31 C21 C 0 1 N N N 10.671 27.470 23.691 -5.141 -1.197 0.029 C31 EO6 24 EO6 C32 C22 C 0 1 N N N 8.554 27.353 22.289 -6.901 0.336 1.081 C32 EO6 25 EO6 C33 C23 C 0 1 N N N 7.149 27.982 21.774 -7.897 1.448 0.732 C33 EO6 26 EO6 N01 N1 N 0 1 N N N 4.215 30.233 21.568 -11.305 1.029 0.199 N01 EO6 27 EO6 N03 N2 N 0 1 N N N 6.657 29.395 22.299 -8.857 0.931 -0.252 N03 EO6 28 EO6 N11 N3 N 0 1 N N N 12.414 23.567 26.347 -0.650 -0.419 -0.599 N11 EO6 29 EO6 N18 N4 N 0 1 N N N 10.504 20.387 26.686 2.992 0.004 -0.175 N18 EO6 30 EO6 N23 N5 N 0 1 N N N 5.856 21.896 24.555 5.626 4.481 0.715 N23 EO6 31 EO6 O28 O3 O 0 1 N N N 10.098 18.502 29.030 3.797 -1.579 -2.460 O28 EO6 32 EO6 O29 O4 O 0 1 N N N 10.623 22.244 28.124 1.569 0.163 -1.870 O29 EO6 33 EO6 O30 O5 O 0 1 N N N 10.825 23.404 24.647 -1.888 -0.007 1.198 O30 EO6 34 EO6 O1 O6 O 0 1 N Y N 10.351 15.884 27.425 5.774 -3.271 -0.925 O1 EO6 35 EO6 H1 H1 H 0 1 N N N 7.179 30.664 24.005 -7.849 1.130 -2.086 H1 EO6 36 EO6 H2 H2 H 0 1 N N N 6.826 28.957 24.438 -9.182 -0.051 -2.084 H2 EO6 37 EO6 H3 H3 H 0 1 N N N 9.257 29.632 24.795 -7.891 -1.593 -0.704 H3 EO6 38 EO6 H4 H4 H 0 1 N N N 9.408 29.878 23.022 -6.878 -1.108 -2.087 H4 EO6 39 EO6 H5 H5 H 0 1 N N N 9.268 27.597 25.900 -5.173 0.545 -1.944 H5 EO6 40 EO6 H6 H6 H 0 1 N N N 8.116 26.449 25.140 -5.443 1.766 -0.627 H6 EO6 41 EO6 H7 H7 H 0 1 N N N 12.696 21.546 25.625 0.497 0.323 0.993 H7 EO6 42 EO6 H8 H8 H 0 1 N N N 13.589 22.286 28.525 0.800 -2.549 0.009 H8 EO6 43 EO6 H9 H9 H 0 1 N N N 13.885 20.714 27.708 1.763 -1.823 1.317 H9 EO6 44 EO6 H10 H10 H 0 1 N N N 15.080 23.465 27.017 -1.283 -1.998 1.301 H10 EO6 45 EO6 H11 H11 H 0 1 N N N 16.308 22.426 25.094 0.798 -3.649 2.805 H11 EO6 46 EO6 H12 H12 H 0 1 N N N 15.378 20.907 25.330 -0.966 -3.758 3.019 H12 EO6 47 EO6 H13 H13 H 0 1 N N N 14.530 22.413 24.843 -0.226 -4.235 1.472 H13 EO6 48 EO6 H14 H14 H 0 1 N N N 8.833 20.515 28.026 3.782 0.978 -1.856 H14 EO6 49 EO6 H15 H15 H 0 1 N N N 7.155 19.624 26.510 5.473 0.495 0.638 H15 EO6 50 EO6 H16 H16 H 0 1 N N N 8.409 19.040 25.365 6.050 1.296 -0.843 H16 EO6 51 EO6 H17 H17 H 0 1 N N N 9.043 21.470 24.849 3.688 2.249 0.854 H17 EO6 52 EO6 H18 H18 H 0 1 N N N 6.086 23.685 25.802 5.086 5.373 -1.119 H18 EO6 53 EO6 H19 H19 H 0 1 N N N 9.931 25.373 23.733 -4.061 0.500 0.954 H19 EO6 54 EO6 H20 H20 H 0 1 N N N 16.152 22.197 28.908 0.729 -1.241 3.468 H20 EO6 55 EO6 H21 H21 H 0 1 N N N 16.478 20.828 27.792 -0.343 -0.111 2.607 H21 EO6 56 EO6 H22 H22 H 0 1 N N N 17.271 22.417 27.520 -1.034 -1.350 3.682 H22 EO6 57 EO6 H23 H23 H 0 1 N N N 7.644 21.729 27.344 4.922 3.115 -1.780 H23 EO6 58 EO6 H24 H24 H 0 1 N N N 8.465 17.853 27.852 5.638 -0.687 -2.172 H24 EO6 59 EO6 H25 H25 H 0 1 N N N 11.146 27.319 22.711 -5.172 -1.686 1.003 H25 EO6 60 EO6 H26 H26 H 0 1 N N N 11.273 28.171 24.287 -4.982 -1.897 -0.792 H26 EO6 61 EO6 H27 H27 H 0 1 N N N 8.408 26.266 22.368 -7.417 -0.459 1.619 H27 EO6 62 EO6 H28 H28 H 0 1 N N N 9.304 27.567 21.513 -6.105 0.741 1.705 H28 EO6 63 EO6 H29 H29 H 0 1 N N N 7.222 28.061 20.679 -8.427 1.760 1.631 H29 EO6 64 EO6 H30 H30 H 0 1 N N N 6.364 27.258 22.038 -7.361 2.298 0.308 H30 EO6 65 EO6 H31 H31 H 0 1 N N N 13.011 24.184 26.860 -0.610 -0.577 -1.555 H31 EO6 66 EO6 H32 H32 H 0 1 N N N 10.956 19.891 25.945 3.135 -0.176 0.767 H32 EO6 67 EO6 H33 H33 H 0 1 N N N 5.025 22.010 24.011 6.208 5.154 1.100 H33 EO6 68 EO6 H34 H34 H 0 1 N N N 9.550 18.969 29.650 2.973 -1.828 -2.020 H34 EO6 69 EO6 H35 H35 H 0 1 N Y N 10.871 15.251 26.944 6.058 -3.965 -0.315 H35 EO6 70 EO6 O3 O7 O 0 1 N Y N ? ? ? 6.256 -1.513 0.516 O3 EO6 71 EO6 O2 O8 O 0 1 N Y N ? ? ? 4.008 -2.540 0.398 O2 EO6 72 EO6 H36 H36 H 0 1 N N N 5.445 22.254 26.679 3.758 5.219 0.068 H36 EO6 73 EO6 H37 H37 H 0 1 N N N 8.297 23.076 26.351 3.234 3.309 -1.201 H37 EO6 74 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EO6 N01 C02 TRIP N N 1 EO6 C33 C32 SING N N 2 EO6 C33 N03 SING N N 3 EO6 C02 N03 SING N N 4 EO6 C32 C06 SING N N 5 EO6 N03 C04 SING N N 6 EO6 O26 C22 DOUB N N 7 EO6 C06 C31 SING N N 8 EO6 C06 C05 SING N N 9 EO6 C06 C07 SING N N 10 EO6 C31 C08 SING N N 11 EO6 C04 C05 SING N N 12 EO6 C22 N23 SING N N 13 EO6 C22 C21 SING N N 14 EO6 C08 C07 SING N N 15 EO6 C08 O09 SING N N 16 EO6 N23 C24 SING N N 17 EO6 O30 C10 DOUB N N 18 EO6 C21 C20 SING N N 19 EO6 C21 C25 SING N N 20 EO6 O09 C10 SING N N 21 EO6 C10 N11 SING N N 22 EO6 C16 C14 SING N N 23 EO6 C24 C25 SING N N 24 EO6 C20 C19 SING N N 25 EO6 N11 C12 SING N N 26 EO6 C12 C17 SING N N 27 EO6 C12 C13 SING N N 28 EO6 SG C27 SING N N 29 EO6 N18 C19 SING N N 30 EO6 N18 C17 SING N N 31 EO6 C14 C13 SING N N 32 EO6 C14 C15 SING N N 33 EO6 C19 C27 SING N N 34 EO6 C17 O29 DOUB N N 35 EO6 C27 O28 SING N N 36 EO6 SG O1 SING N N 37 EO6 C04 H1 SING N N 38 EO6 C04 H2 SING N N 39 EO6 C05 H3 SING N N 40 EO6 C05 H4 SING N N 41 EO6 C07 H5 SING N N 42 EO6 C07 H6 SING N N 43 EO6 C12 H7 SING N N 44 EO6 C13 H8 SING N N 45 EO6 C13 H9 SING N N 46 EO6 C14 H10 SING N N 47 EO6 C16 H11 SING N N 48 EO6 C16 H12 SING N N 49 EO6 C16 H13 SING N N 50 EO6 C19 H14 SING N N 51 EO6 C20 H15 SING N N 52 EO6 C20 H16 SING N N 53 EO6 C21 H17 SING N N 54 EO6 C24 H18 SING N N 55 EO6 C08 H19 SING N N 56 EO6 C15 H20 SING N N 57 EO6 C15 H21 SING N N 58 EO6 C15 H22 SING N N 59 EO6 C25 H23 SING N N 60 EO6 C27 H24 SING N N 61 EO6 C31 H25 SING N N 62 EO6 C31 H26 SING N N 63 EO6 C32 H27 SING N N 64 EO6 C32 H28 SING N N 65 EO6 C33 H29 SING N N 66 EO6 C33 H30 SING N N 67 EO6 N11 H31 SING N N 68 EO6 N18 H32 SING N N 69 EO6 N23 H33 SING N N 70 EO6 O28 H34 SING N N 71 EO6 O1 H35 SING N N 72 EO6 SG O3 DOUB N N 73 EO6 SG O2 DOUB N N 74 EO6 C24 H36 SING N N 75 EO6 C25 H37 SING N N 76 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EO6 SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OC1CC2(CCN(CC2)C#N)C1)C(O)S(=O)(=O)O" EO6 InChI InChI 1.03 "InChI=1S/C23H37N5O8S/c1-14(2)9-17(27-22(32)36-16-11-23(12-16)4-7-28(13-24)8-5-23)20(30)26-18(21(31)37(33,34)35)10-15-3-6-25-19(15)29/h14-18,21,31H,3-12H2,1-2H3,(H,25,29)(H,26,30)(H,27,32)(H,33,34,35)/t15-,17-,18-,21+/m0/s1" EO6 InChIKey InChI 1.03 CSWBWWIUTWLAOZ-QUJKESNLSA-N EO6 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC1CC2(CCN(CC2)C#N)C1)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)[S](O)(=O)=O" EO6 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC1CC2(CCN(CC2)C#N)C1)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" EO6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C#N" EO6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EO6 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-[(N-{[(7-cyano-7-azaspiro[3.5]nonan-2-yl)oxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" EO6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-2-[(7-cyano-7-azaspiro[3.5]nonan-2-yl)oxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EO6 "Create component" 2021-12-10 RCSB EO6 "Modify coordinates" 2021-12-13 RCSB EO6 "Initial release" 2021-12-22 RCSB ##