data_EQC # _chem_comp.id EQC _chem_comp.name Arctigenin _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H24 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(3R,4R)-4-[(3,4-dimethoxyphenyl)methyl]-3-[(3-methoxy-4-oxidanyl-phenyl)methyl]oxolan-2-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-01-20 _chem_comp.pdbx_modified_date 2021-04-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 372.412 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EQC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6LRM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EQC C4 C1 C 0 1 N N N 24.571 80.051 29.242 -1.452 -1.562 0.312 C4 EQC 1 EQC C14 C2 C 0 1 Y N N 25.992 75.541 28.386 -3.479 1.921 0.557 C14 EQC 2 EQC C5 C3 C 0 1 N N N 23.194 77.691 26.757 1.458 0.199 1.143 C5 EQC 3 EQC C6 C4 C 0 1 N N N 25.322 77.704 29.499 -1.649 0.731 -0.666 C6 EQC 4 EQC C11 C5 C 0 1 Y N N 23.600 77.478 22.496 5.571 -0.196 0.041 C11 EQC 5 EQC C7 C6 C 0 1 Y N N 25.087 76.245 29.171 -3.094 0.878 -0.264 C7 EQC 6 EQC C8 C7 C 0 1 Y N N 23.341 77.625 25.260 2.907 0.062 0.754 C8 EQC 7 EQC C9 C8 C 0 1 Y N N 24.268 76.749 24.703 3.557 1.112 0.131 C9 EQC 8 EQC C10 C9 C 0 1 Y N N 24.377 76.657 23.334 4.889 0.987 -0.227 C10 EQC 9 EQC C12 C10 C 0 1 Y N N 22.698 78.363 23.038 4.915 -1.244 0.666 C12 EQC 10 EQC C13 C11 C 0 1 Y N N 22.566 78.421 24.422 3.585 -1.113 1.021 C13 EQC 11 EQC C3 C12 C 0 1 N N R 24.270 78.624 28.880 -0.922 -0.143 0.357 C3 EQC 12 EQC C1 C13 C 0 1 N N N 23.711 80.091 27.105 0.743 -1.790 -0.244 C1 EQC 13 EQC C15 C14 C 0 1 Y N N 25.810 74.196 28.058 -4.802 2.057 0.933 C15 EQC 14 EQC C16 C15 C 0 1 Y N N 24.715 73.523 28.576 -5.746 1.146 0.487 C16 EQC 15 EQC C17 C16 C 0 1 Y N N 23.819 74.209 29.401 -5.359 0.096 -0.340 C17 EQC 16 EQC C18 C17 C 0 1 Y N N 24.004 75.547 29.697 -4.032 -0.031 -0.718 C18 EQC 17 EQC C19 C18 C 0 1 N N N 26.005 74.954 23.489 4.767 3.202 -1.084 C19 EQC 18 EQC C2 C19 C 0 1 N N R 24.204 78.668 27.354 0.573 -0.274 -0.011 C2 EQC 19 EQC C20 C20 C 0 1 N N N 23.017 78.101 20.272 7.512 -1.569 -0.010 C20 EQC 20 EQC C21 C21 C 0 1 N N N 21.776 74.120 30.656 -5.812 -1.853 -1.626 C21 EQC 21 EQC O1 O1 O 0 1 N N N 24.265 80.871 28.205 -0.609 -2.300 -0.431 O1 EQC 22 EQC O2 O2 O 0 1 N N N 25.253 75.861 22.675 5.529 2.019 -0.840 O2 EQC 23 EQC O3 O3 O 0 1 N N N 23.788 77.279 21.167 6.878 -0.325 -0.313 O3 EQC 24 EQC O4 O4 O 0 1 N N N 22.777 73.462 29.865 -6.281 -0.801 -0.780 O4 EQC 25 EQC O5 O5 O 0 1 N N N 24.528 72.189 28.289 -7.049 1.277 0.857 O5 EQC 26 EQC O6 O6 O 0 1 N N N 25.047 80.478 30.263 -2.456 -1.961 0.854 O6 EQC 27 EQC H1 H1 H 0 1 N N N 26.868 76.053 28.016 -2.744 2.629 0.910 H1 EQC 28 EQC H2 H2 H 0 1 N N N 22.176 78.026 27.006 1.260 -0.409 2.026 H2 EQC 29 EQC H3 H3 H 0 1 N N N 23.365 76.691 27.181 1.239 1.243 1.365 H3 EQC 30 EQC H4 H4 H 0 1 N N N 26.312 77.995 29.118 -1.591 0.265 -1.649 H4 EQC 31 EQC H5 H5 H 0 1 N N N 25.298 77.827 30.592 -1.180 1.715 -0.702 H5 EQC 32 EQC H6 H6 H 0 1 N N N 24.897 76.146 25.340 3.025 2.028 -0.077 H6 EQC 33 EQC H7 H7 H 0 1 N N N 22.103 79.001 22.401 5.442 -2.163 0.876 H7 EQC 34 EQC H8 H8 H 0 1 N N N 21.846 79.099 24.856 3.074 -1.931 1.508 H8 EQC 35 EQC H9 H9 H 0 1 N N N 23.280 78.350 29.273 -1.033 0.273 1.359 H9 EQC 36 EQC H10 H10 H 0 1 N N N 24.080 80.466 26.139 1.345 -1.972 -1.134 H10 EQC 37 EQC H11 H11 H 0 1 N N N 22.612 80.129 27.118 1.203 -2.258 0.627 H11 EQC 38 EQC H12 H12 H 0 1 N N N 26.511 73.689 27.411 -5.101 2.872 1.576 H12 EQC 39 EQC H13 H13 H 0 1 N N N 23.302 76.055 30.342 -3.728 -0.845 -1.360 H13 EQC 40 EQC H14 H14 H 0 1 N N N 26.679 74.362 22.853 4.405 3.603 -0.137 H14 EQC 41 EQC H15 H15 H 0 1 N N N 26.597 75.523 24.221 5.395 3.945 -1.576 H15 EQC 42 EQC H16 H16 H 0 1 N N N 25.316 74.280 24.019 3.918 2.962 -1.725 H16 EQC 43 EQC H17 H17 H 0 1 N N N 25.201 78.517 26.915 0.795 0.283 -0.922 H17 EQC 44 EQC H18 H18 H 0 1 N N N 23.262 77.841 19.232 7.483 -1.740 1.066 H18 EQC 45 EQC H19 H19 H 0 1 N N N 21.945 77.931 20.450 6.989 -2.378 -0.521 H19 EQC 46 EQC H20 H20 H 0 1 N N N 23.254 79.160 20.451 8.549 -1.539 -0.345 H20 EQC 47 EQC H21 H21 H 0 1 N N N 21.007 73.392 30.954 -5.366 -1.426 -2.524 H21 EQC 48 EQC H22 H22 H 0 1 N N N 22.243 74.549 31.555 -5.063 -2.440 -1.093 H22 EQC 49 EQC H23 H23 H 0 1 N N N 21.311 74.923 30.065 -6.647 -2.496 -1.905 H23 EQC 50 EQC H24 H24 H 0 1 N N N 23.738 71.880 28.717 -7.576 1.819 0.254 H24 EQC 51 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EQC C20 O3 SING N N 1 EQC O3 C11 SING N N 2 EQC C11 C12 DOUB Y N 3 EQC C11 C10 SING Y N 4 EQC O2 C10 SING N N 5 EQC O2 C19 SING N N 6 EQC C12 C13 SING Y N 7 EQC C10 C9 DOUB Y N 8 EQC C13 C8 DOUB Y N 9 EQC C9 C8 SING Y N 10 EQC C8 C5 SING N N 11 EQC C5 C2 SING N N 12 EQC C1 C2 SING N N 13 EQC C1 O1 SING N N 14 EQC C2 C3 SING N N 15 EQC C15 C14 DOUB Y N 16 EQC C15 C16 SING Y N 17 EQC O1 C4 SING N N 18 EQC O5 C16 SING N N 19 EQC C14 C7 SING Y N 20 EQC C16 C17 DOUB Y N 21 EQC C3 C4 SING N N 22 EQC C3 C6 SING N N 23 EQC C7 C6 SING N N 24 EQC C7 C18 DOUB Y N 25 EQC C4 O6 DOUB N N 26 EQC C17 C18 SING Y N 27 EQC C17 O4 SING N N 28 EQC O4 C21 SING N N 29 EQC C14 H1 SING N N 30 EQC C5 H2 SING N N 31 EQC C5 H3 SING N N 32 EQC C6 H4 SING N N 33 EQC C6 H5 SING N N 34 EQC C9 H6 SING N N 35 EQC C12 H7 SING N N 36 EQC C13 H8 SING N N 37 EQC C3 H9 SING N N 38 EQC C1 H10 SING N N 39 EQC C1 H11 SING N N 40 EQC C15 H12 SING N N 41 EQC C18 H13 SING N N 42 EQC C19 H14 SING N N 43 EQC C19 H15 SING N N 44 EQC C19 H16 SING N N 45 EQC C2 H17 SING N N 46 EQC C20 H18 SING N N 47 EQC C20 H19 SING N N 48 EQC C20 H20 SING N N 49 EQC C21 H21 SING N N 50 EQC C21 H22 SING N N 51 EQC C21 H23 SING N N 52 EQC O5 H24 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EQC InChI InChI 1.03 "InChI=1S/C21H24O6/c1-24-18-7-5-13(11-20(18)26-3)8-15-12-27-21(23)16(15)9-14-4-6-17(22)19(10-14)25-2/h4-7,10-11,15-16,22H,8-9,12H2,1-3H3/t15-,16+/m0/s1" EQC InChIKey InChI 1.03 NQWVSMVXKMHKTF-JKSUJKDBSA-N EQC SMILES_CANONICAL CACTVS 3.385 "COc1cc(C[C@@H]2[C@H](COC2=O)Cc3ccc(OC)c(OC)c3)ccc1O" EQC SMILES CACTVS 3.385 "COc1cc(C[CH]2[CH](COC2=O)Cc3ccc(OC)c(OC)c3)ccc1O" EQC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)C[C@H]2COC(=O)[C@@H]2Cc3ccc(c(c3)OC)O" EQC SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)CC2COC(=O)C2Cc3ccc(c(c3)OC)O" # _pdbx_chem_comp_identifier.comp_id EQC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},4~{R})-4-[(3,4-dimethoxyphenyl)methyl]-3-[(3-methoxy-4-oxidanyl-phenyl)methyl]oxolan-2-one" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EQC _pdbx_chem_comp_synonyms.name "(3R,4R)-4-[(3,4-dimethoxyphenyl)methyl]-3-[(3-methoxy-4-oxidanyl-phenyl)methyl]oxolan-2-one" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EQC "Create component" 2020-01-20 PDBJ EQC "Modify synonyms" 2021-03-13 RCSB EQC "Initial release" 2021-04-14 RCSB ##