data_EW9 # _chem_comp.id EW9 _chem_comp.name "(1S,2S)-2-{[N-({[7-(tert-butoxycarbonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H46 N4 O10 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-14 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 618.740 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EW9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7T45 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EW9 C10 C1 C 0 1 N N N N N N 7.337 27.911 25.420 -6.193 1.544 1.574 C10 EW9 1 EW9 C16 C2 C 0 1 N N N N N N 9.876 26.068 25.783 -2.904 0.916 2.381 C16 EW9 2 EW9 C20 C3 C 0 1 N N S N N N 12.207 22.090 26.993 1.652 -0.015 1.116 C20 EW9 3 EW9 C21 C4 C 0 1 N N N N N N 10.889 21.512 27.519 2.435 -0.070 -0.170 C21 EW9 4 EW9 C23 C5 C 0 1 N N S N N N 9.097 19.822 27.493 4.532 0.060 -1.404 C23 EW9 5 EW9 C24 C6 C 0 1 N N S N N N 9.317 18.472 28.123 4.549 -1.398 -1.866 C24 EW9 6 EW9 O25 O1 O 0 1 N N N N N N 8.067 17.971 28.533 5.396 -1.526 -3.009 O25 EW9 7 EW9 C26 C7 C 0 1 N N N N N N 8.054 19.734 26.295 5.966 0.533 -1.157 C26 EW9 8 EW9 C02 C8 C 0 1 N N N N N N 5.211 29.381 22.940 -7.831 -0.377 -0.875 C02 EW9 9 EW9 C04 C9 C 0 1 N N N N N N 3.576 29.251 21.041 -10.067 -0.113 -1.666 C04 EW9 10 EW9 C05 C10 C 0 1 N N N N N N 3.232 30.742 21.053 -10.212 -1.602 -1.989 C05 EW9 11 EW9 C06 C11 C 0 1 N N N N N N 3.662 28.709 19.605 -9.619 0.639 -2.921 C06 EW9 12 EW9 C07 C12 C 0 1 N N N N N N 2.429 28.484 21.797 -11.414 0.439 -1.194 C07 EW9 13 EW9 C09 C13 C 0 1 N N N N N N 6.891 29.281 24.866 -7.160 0.374 1.355 C09 EW9 14 EW9 C11 C14 C 0 1 N N N N N N 8.326 27.122 24.558 -4.760 1.054 1.377 C11 EW9 15 EW9 C12 C15 C 0 1 N N N N N N 8.574 25.648 25.077 -4.247 0.181 2.529 C12 EW9 16 EW9 C13 C16 C 0 1 N N N N N N 7.832 27.152 23.137 -4.522 0.444 -0.004 C13 EW9 17 EW9 C14 C17 C 0 1 N N N N N N 7.544 28.561 22.585 -5.499 -0.719 -0.214 C14 EW9 18 EW9 C15 C18 C 0 1 N N N N N N 9.776 27.433 24.956 -3.700 2.088 1.779 C15 EW9 19 EW9 C18 C19 C 0 1 N N N N N N 11.182 24.009 25.789 -0.677 0.454 1.656 C18 EW9 20 EW9 C27 C20 C 0 1 N N S N N N 7.677 21.068 25.756 5.962 2.030 -0.839 C27 EW9 21 EW9 C28 C21 C 0 1 N N N N N N 6.709 21.019 24.572 7.369 2.520 -0.582 C28 EW9 22 EW9 C30 C22 C 0 1 N N N N N N 5.732 22.601 25.976 6.386 4.101 -1.971 C30 EW9 23 EW9 C31 C23 C 0 1 N N N N N N 6.808 21.859 26.791 5.496 2.843 -2.069 C31 EW9 24 EW9 C34 C24 C 0 1 N N N N N N 13.299 21.783 27.989 2.063 -1.185 2.013 C34 EW9 25 EW9 C35 C25 C 0 1 N N N N N N 14.674 22.275 27.587 3.501 -0.979 2.493 C35 EW9 26 EW9 C36 C26 C 0 1 N N N N N N 15.125 21.668 26.286 3.572 0.276 3.366 C36 EW9 27 EW9 C37 C27 C 0 1 N N N N N N 15.730 21.996 28.695 3.945 -2.194 3.310 C37 EW9 28 EW9 N08 N1 N 0 1 N N N N N N 6.585 29.366 23.376 -6.865 -0.245 0.056 N08 EW9 29 EW9 N19 N2 N 0 1 N N N N N N 12.027 23.537 26.721 0.220 -0.106 0.821 N19 EW9 30 EW9 N22 N3 N 0 1 N N N N N N 10.335 20.369 27.013 3.761 0.170 -0.163 N22 EW9 31 EW9 N29 N4 N 0 1 N N N N N N 5.645 21.838 24.697 7.581 3.678 -1.232 N29 EW9 32 EW9 O01 O2 O 0 1 N N N N N N 4.319 29.721 23.720 -7.576 -0.890 -1.947 O01 EW9 33 EW9 O03 O3 O 0 1 N N N N N N 4.882 28.998 21.649 -9.078 0.061 -0.618 O03 EW9 34 EW9 O17 O4 O 0 1 N N N N N N 11.065 25.368 25.536 -1.995 0.285 1.441 O17 EW9 35 EW9 O32 O5 O 0 1 N N N N N N 6.908 20.257 23.604 8.188 1.952 0.110 O32 EW9 36 EW9 O33 O6 O 0 1 N N N N N N 10.314 22.149 28.432 1.871 -0.329 -1.212 O33 EW9 37 EW9 O38 O7 O 0 1 N N N N N N 10.501 23.231 25.120 -0.296 1.112 2.605 O38 EW9 38 EW9 SG S1 S 0 1 N Y N N N N 10.121 17.363 26.953 5.177 -2.450 -0.527 SG EW9 39 EW9 H1 H1 H 0 1 N N N N N N 6.437 27.292 25.549 -6.410 2.335 0.857 H1 EW9 40 EW9 H2 H2 H 0 1 N N N N N N 7.808 28.082 26.399 -6.310 1.928 2.588 H2 EW9 41 EW9 H3 H3 H 0 1 N N N N N N 9.700 26.259 26.852 -2.429 1.155 3.332 H3 EW9 42 EW9 H4 H4 H 0 1 N N N N N N 12.448 21.582 26.048 1.859 0.925 1.628 H4 EW9 43 EW9 H5 H5 H 0 1 N N N N N N 8.671 20.495 28.252 4.073 0.680 -2.174 H5 EW9 44 EW9 H6 H6 H 0 1 N N N N N N 10.003 18.570 28.977 3.537 -1.709 -2.127 H6 EW9 45 EW9 H7 H7 H 0 1 N N N N N N 7.669 18.576 29.148 6.314 -1.267 -2.850 H7 EW9 46 EW9 H8 H8 H 0 1 N N N N N N 7.145 19.232 26.658 6.390 -0.016 -0.316 H8 EW9 47 EW9 H9 H9 H 0 1 N N N N N N 8.501 19.141 25.483 6.567 0.353 -2.048 H9 EW9 48 EW9 H10 H10 H 0 1 N N N N N N 3.178 31.098 22.092 -10.532 -2.138 -1.095 H10 EW9 49 EW9 H11 H11 H 0 1 N N N N N N 4.010 31.302 20.514 -10.954 -1.733 -2.776 H11 EW9 50 EW9 H12 H12 H 0 1 N N N N N N 2.260 30.898 20.561 -9.253 -1.996 -2.325 H12 EW9 51 EW9 H13 H13 H 0 1 N N N N N N 3.910 27.638 19.631 -10.361 0.508 -3.708 H13 EW9 52 EW9 H14 H14 H 0 1 N N N N N N 2.694 28.849 19.102 -9.516 1.700 -2.691 H14 EW9 53 EW9 H15 H15 H 0 1 N N N N N N 4.443 29.253 19.054 -8.659 0.245 -3.257 H15 EW9 54 EW9 H16 H16 H 0 1 N N N N N N 2.353 28.860 22.828 -11.733 -0.097 -0.301 H16 EW9 55 EW9 H17 H17 H 0 1 N N N N N N 1.474 28.647 21.276 -11.311 1.500 -0.965 H17 EW9 56 EW9 H18 H18 H 0 1 N N N N N N 2.658 27.408 21.815 -12.156 0.309 -1.982 H18 EW9 57 EW9 H19 H19 H 0 1 N N N N N N 7.694 30.001 25.080 -7.030 -0.361 2.148 H19 EW9 58 EW9 H20 H20 H 0 1 N N N N N N 5.980 29.576 25.408 -8.186 0.742 1.362 H20 EW9 59 EW9 H21 H21 H 0 1 N N N N N N 7.796 25.284 25.764 -4.193 -0.880 2.283 H21 EW9 60 EW9 H22 H22 H 0 1 N N N N N N 8.724 24.914 24.271 -4.747 0.372 3.478 H22 EW9 61 EW9 H23 H23 H 0 1 N N N N N N 6.902 26.567 23.085 -4.687 1.201 -0.770 H23 EW9 62 EW9 H24 H24 H 0 1 N N N N N N 8.596 26.684 22.499 -3.498 0.077 -0.068 H24 EW9 63 EW9 H25 H25 H 0 1 N N N N N N 8.496 29.111 22.543 -5.431 -1.072 -1.243 H25 EW9 64 EW9 H26 H26 H 0 1 N N N N N N 7.139 28.452 21.568 -5.253 -1.531 0.470 H26 EW9 65 EW9 H27 H27 H 0 1 N N N N N N 10.469 27.488 24.103 -4.049 2.806 2.521 H27 EW9 66 EW9 H28 H28 H 0 1 N N N N N N 9.883 28.336 25.574 -3.206 2.561 0.930 H28 EW9 67 EW9 H29 H29 H 0 1 N N N N N N 8.571 21.653 25.495 5.321 2.235 0.019 H29 EW9 68 EW9 H30 H30 H 0 1 N N N N N N 6.034 23.642 25.789 6.662 4.447 -2.967 H30 EW9 69 EW9 H31 H31 H 0 1 N N N N N N 4.767 22.589 26.503 5.865 4.891 -1.429 H31 EW9 70 EW9 H32 H32 H 0 1 N N N N N N 6.336 21.164 27.501 5.690 2.298 -2.993 H32 EW9 71 EW9 H33 H33 H 0 1 N N N N N N 7.432 22.578 27.341 4.440 3.104 -1.987 H33 EW9 72 EW9 H34 H34 H 0 1 N N N N N N 13.032 22.254 28.947 1.396 -1.235 2.874 H34 EW9 73 EW9 H35 H35 H 0 1 N N N N N N 13.349 20.692 28.118 1.998 -2.115 1.449 H35 EW9 74 EW9 H36 H36 H 0 1 N N N N N N 14.617 23.365 27.453 4.158 -0.860 1.632 H36 EW9 75 EW9 H37 H37 H 0 1 N N N N N N 16.124 22.049 26.030 2.958 0.136 4.255 H37 EW9 76 EW9 H38 H38 H 0 1 N N N N N N 15.165 20.573 26.387 4.606 0.454 3.663 H38 EW9 77 EW9 H39 H39 H 0 1 N N N N N N 14.415 21.937 25.490 3.204 1.133 2.801 H39 EW9 78 EW9 H40 H40 H 0 1 N N N N N N 15.394 22.442 29.643 3.894 -3.088 2.689 H40 EW9 79 EW9 H41 H41 H 0 1 N N N N N N 15.849 20.910 28.823 4.969 -2.047 3.653 H41 EW9 80 EW9 H42 H42 H 0 1 N N N N N N 16.694 22.438 28.403 3.288 -2.312 4.172 H42 EW9 81 EW9 H43 H43 H 0 1 N N N N N N 12.560 24.192 27.257 -0.082 -0.569 0.024 H43 EW9 82 EW9 H44 H44 H 0 1 N N N N N N 10.813 19.892 26.275 4.205 0.416 0.664 H44 EW9 83 EW9 H45 H45 H 0 1 N N N N N N 4.905 21.922 24.029 8.417 4.171 -1.214 H45 EW9 84 EW9 O2 O8 O 0 1 N Y N N N N ? ? ? 5.266 -3.838 -1.145 O2 EW9 85 EW9 O3 O9 O 0 1 N Y N N N N ? ? ? 6.524 -2.116 -0.222 O3 EW9 86 EW9 O1 O10 O 0 1 N Y N N N N 9.994 15.784 27.776 4.204 -2.584 0.500 O1 EW9 87 EW9 H46 H46 H 0 1 N Y N N N N ? ? ? 5.591 -4.518 -0.539 H46 EW9 88 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EW9 C06 C04 SING N N 1 EW9 C04 C05 SING N N 2 EW9 C04 O03 SING N N 3 EW9 C04 C07 SING N N 4 EW9 O03 C02 SING N N 5 EW9 C14 C13 SING N N 6 EW9 C14 N08 SING N N 7 EW9 C02 N08 SING N N 8 EW9 C02 O01 DOUB N N 9 EW9 C13 C11 SING N N 10 EW9 N08 C09 SING N N 11 EW9 O32 C28 DOUB N N 12 EW9 C11 C15 SING N N 13 EW9 C11 C12 SING N N 14 EW9 C11 C10 SING N N 15 EW9 C28 N29 SING N N 16 EW9 C28 C27 SING N N 17 EW9 N29 C30 SING N N 18 EW9 C09 C10 SING N N 19 EW9 C15 C16 SING N N 20 EW9 C12 C16 SING N N 21 EW9 O38 C18 DOUB N N 22 EW9 O17 C16 SING N N 23 EW9 O17 C18 SING N N 24 EW9 C27 C26 SING N N 25 EW9 C27 C31 SING N N 26 EW9 C18 N19 SING N N 27 EW9 C30 C31 SING N N 28 EW9 C36 C35 SING N N 29 EW9 C26 C23 SING N N 30 EW9 N19 C20 SING N N 31 EW9 SG C24 SING N N 32 EW9 C20 C21 SING N N 33 EW9 C20 C34 SING N N 34 EW9 N22 C23 SING N N 35 EW9 N22 C21 SING N N 36 EW9 C23 C24 SING N N 37 EW9 C21 O33 DOUB N N 38 EW9 C35 C34 SING N N 39 EW9 C35 C37 SING N N 40 EW9 C24 O25 SING N N 41 EW9 C10 H1 SING N N 42 EW9 C10 H2 SING N N 43 EW9 C16 H3 SING N N 44 EW9 C20 H4 SING N N 45 EW9 C23 H5 SING N N 46 EW9 C24 H6 SING N N 47 EW9 O25 H7 SING N N 48 EW9 C26 H8 SING N N 49 EW9 C26 H9 SING N N 50 EW9 C05 H10 SING N N 51 EW9 C05 H11 SING N N 52 EW9 C05 H12 SING N N 53 EW9 C06 H13 SING N N 54 EW9 C06 H14 SING N N 55 EW9 C06 H15 SING N N 56 EW9 C07 H16 SING N N 57 EW9 C07 H17 SING N N 58 EW9 C07 H18 SING N N 59 EW9 C09 H19 SING N N 60 EW9 C09 H20 SING N N 61 EW9 C12 H21 SING N N 62 EW9 C12 H22 SING N N 63 EW9 C13 H23 SING N N 64 EW9 C13 H24 SING N N 65 EW9 C14 H25 SING N N 66 EW9 C14 H26 SING N N 67 EW9 C15 H27 SING N N 68 EW9 C15 H28 SING N N 69 EW9 C27 H29 SING N N 70 EW9 C30 H30 SING N N 71 EW9 C30 H31 SING N N 72 EW9 C31 H32 SING N N 73 EW9 C31 H33 SING N N 74 EW9 C34 H34 SING N N 75 EW9 C34 H35 SING N N 76 EW9 C35 H36 SING N N 77 EW9 C36 H37 SING N N 78 EW9 C36 H38 SING N N 79 EW9 C36 H39 SING N N 80 EW9 C37 H40 SING N N 81 EW9 C37 H41 SING N N 82 EW9 C37 H42 SING N N 83 EW9 N19 H43 SING N N 84 EW9 N22 H44 SING N N 85 EW9 N29 H45 SING N N 86 EW9 SG O2 SING N N 87 EW9 SG O3 DOUB N N 88 EW9 SG O1 DOUB N N 89 EW9 O2 H46 SING N N 90 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EW9 SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(O)S(=O)(=O)O" EW9 InChI InChI 1.03 "InChI=1S/C27H46N4O10S/c1-16(2)12-19(22(33)29-20(23(34)42(37,38)39)13-17-6-9-28-21(17)32)30-24(35)40-18-14-27(15-18)7-10-31(11-8-27)25(36)41-26(3,4)5/h16-20,23,34H,6-15H2,1-5H3,(H,28,32)(H,29,33)(H,30,35)(H,37,38,39)/t17-,19-,20-,23-/m0/s1" EW9 InChIKey InChI 1.03 UCJPXTXBXDDVDN-UDSSINMLSA-N EW9 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S](O)(=O)=O" EW9 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" EW9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C(=O)OC(C)(C)C" EW9 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C(=O)OC(C)(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EW9 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-2-{[N-({[7-(tert-butoxycarbonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" EW9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-4-methyl-2-[[7-[(2-methylpropan-2-yl)oxycarbonyl]-7-azaspiro[3.5]nonan-2-yl]oxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EW9 "Create component" 2021-12-14 RCSB EW9 "Initial release" 2021-12-22 RCSB EW9 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id EW9 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C24 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #