data_EX8 # _chem_comp.id EX8 _chem_comp.name "(2~{R},3~{R},4~{S})-3-fluoranyl-4-oxidanyl-pyrrolidine-2-carbaldehyde" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H8 F N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-03 _chem_comp.pdbx_modified_date 2024-06-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 149.120 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EX8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6GFX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EX8 O O O 0 1 N N N N Y Y 58.966 39.470 41.645 2.297 -0.979 0.706 O EX8 1 EX8 C C C 0 1 N N N N Y Y 59.526 40.567 41.707 1.908 -0.024 0.075 C EX8 2 EX8 CA CA C 0 1 N N R N Y N 58.864 41.809 41.131 0.556 -0.062 -0.591 CA EX8 3 EX8 CB CB C 0 1 N N R N N N 57.997 42.470 42.211 -0.474 0.693 0.269 CB EX8 4 EX8 FAG FAG F 0 1 N N N N N N 58.714 43.348 42.901 -1.028 1.753 -0.456 FAG EX8 5 EX8 N N N 0 1 N N N Y Y N 57.975 41.463 40.018 0.088 -1.460 -0.701 N EX8 6 EX8 CD1 CD1 C 0 1 N N N N N N 56.642 42.125 40.321 -1.384 -1.410 -0.511 CD1 EX8 7 EX8 CG CG C 0 1 N N S N N N 56.923 43.164 41.401 -1.561 -0.352 0.608 CG EX8 8 EX8 OD2 OD2 O 0 1 N N N N N N 57.406 44.371 40.803 -2.863 0.234 0.547 OD2 EX8 9 EX8 HA H2 H 0 1 N N N N Y N 59.636 42.518 40.798 0.618 0.392 -1.580 HA EX8 10 EX8 H3 H3 H 0 1 N N N N N N 57.544 41.695 42.847 -0.006 1.064 1.181 H3 EX8 11 EX8 H H4 H 0 1 N Y N Y Y N 57.864 40.471 39.958 0.523 -2.044 -0.003 H EX8 12 EX8 H6 H6 H 0 1 N N N N N N 56.243 42.611 39.418 -1.880 -1.089 -1.426 H6 EX8 13 EX8 H7 H7 H 0 1 N N N N N N 55.920 41.380 40.686 -1.763 -2.379 -0.186 H7 EX8 14 EX8 H8 H8 H 0 1 N N N N N N 56.025 43.338 42.013 -1.380 -0.793 1.588 H8 EX8 15 EX8 H9 H9 H 0 1 N N N N N N 57.579 45.014 41.481 -3.585 -0.396 0.676 H9 EX8 16 EX8 OXT OXT O 0 1 N Y N N Y Y ? ? ? 2.676 1.072 -0.027 O1 EX8 17 EX8 HXT HXT H 0 1 N Y N N Y Y ? ? ? 3.533 1.050 0.421 H1 EX8 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EX8 N CD1 SING N N 1 EX8 N CA SING N N 2 EX8 CD1 CG SING N N 3 EX8 OD2 CG SING N N 4 EX8 CA C SING N N 5 EX8 CA CB SING N N 6 EX8 CG CB SING N N 7 EX8 O C DOUB N N 8 EX8 CB FAG SING N N 9 EX8 CA HA SING N N 10 EX8 CB H3 SING N N 11 EX8 N H SING N N 12 EX8 CD1 H6 SING N N 13 EX8 CD1 H7 SING N N 14 EX8 CG H8 SING N N 15 EX8 OD2 H9 SING N N 16 EX8 C OXT SING N N 17 EX8 OXT HXT SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EX8 InChI InChI 1.06 "InChI=1S/C5H8FNO3/c6-3-2(8)1-7-4(3)5(9)10/h2-4,7-8H,1H2,(H,9,10)/t2-,3-,4-/m0/s1" EX8 InChIKey InChI 1.06 YKUGAOZPOJCILK-HZLVTQRSSA-N EX8 SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CN[C@@H]([C@H]1F)C(O)=O" EX8 SMILES CACTVS 3.385 "O[CH]1CN[CH]([CH]1F)C(O)=O" EX8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@@H]([C@@H]([C@H](N1)C(=O)O)F)O" EX8 SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(N1)C(=O)O)F)O" # _pdbx_chem_comp_identifier.comp_id EX8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S})-3-fluoranyl-4-oxidanyl-pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EX8 "Create component" 2018-05-03 EBI EX8 "Initial release" 2018-07-11 RCSB EX8 "Modify backbone" 2023-11-03 PDBE EX8 "Other modification" 2024-06-28 PDBE #