data_EYG # _chem_comp.id EYG _chem_comp.name "{(2R,4Z)-2-[(1R)-1-amino-3-(methylsulfanyl)propyl]-2-hydroxy-4-[(4-hydroxyphenyl)methylidene]-5-oxoimidazolidin-1-yl}acetic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C16 H21 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id "MET, TYR, GLY" _chem_comp.pdbx_synonyms "CHROMOPHORE (MET-TYR-GLY)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-08-24 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 367.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EYG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NED _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EYG C3 C C 0 1 N N N Y N Y -20.086 -3.509 -13.955 -3.593 -2.145 0.513 C EYG 1 EYG O3 O O 0 1 N N N Y N Y -20.908 -4.426 -14.022 -3.105 -1.574 1.459 O EYG 2 EYG N1 N1 N 0 1 N N N Y Y N -17.679 -3.961 -11.687 -3.178 0.359 -0.419 N1 EYG 3 EYG C2 C2 C 0 1 N N N Y N N -16.947 -2.099 -14.949 -0.373 -2.579 0.026 C2 EYG 4 EYG O2 O2 O 0 1 N N N Y N N -17.171 -2.289 -16.178 -0.419 -3.728 0.425 O2 EYG 5 EYG N3 N3 N 0 1 N N N Y N N -17.681 -2.673 -13.977 -1.405 -1.901 -0.508 N3 EYG 6 EYG CB CB C 0 1 N N N N N N -16.907 -2.405 -10.056 -1.268 1.891 -0.449 CB EYG 7 EYG SD SD S 0 1 N N N N N N -17.268 -1.145 -7.833 -1.411 4.589 -0.022 SD EYG 8 EYG CE CE C 0 1 N N N N N N -18.374 -1.053 -6.540 -2.362 5.659 1.093 CE EYG 9 EYG CG CG C 0 1 N N N N N N -18.076 -2.092 -9.084 -1.988 2.927 0.418 CG EYG 10 EYG OH OH O 0 1 N N N N N N -10.387 2.345 -14.179 6.397 1.372 -0.168 OH EYG 11 EYG CZ CZ C 0 1 Y N N N N N -11.530 1.657 -14.395 5.339 0.537 0.002 CZ EYG 12 EYG C1 C13 C 0 1 N N R Y N N -17.340 -1.929 -12.694 -0.947 -0.553 -0.855 C13 EYG 13 EYG O13 O13 O 0 1 N N N N N N -18.389 -1.000 -12.463 -1.093 -0.334 -2.260 O13 EYG 14 EYG N2 N23 N 0 1 N N N Y N N -16.039 -1.297 -12.978 0.469 -0.473 -0.479 N23 EYG 15 EYG CA1 CA3 C 0 1 N N R Y N N -17.276 -2.815 -11.453 -1.755 0.489 -0.079 CA3 EYG 16 EYG CA3 CAG C 0 1 N N N Y N N -18.662 -3.719 -14.248 -2.759 -2.424 -0.711 CAG EYG 17 EYG CA2 CAR C 0 1 N N N Y N N -15.970 -1.254 -14.324 0.814 -1.718 0.060 CAR EYG 18 EYG CB2 CB2 C 0 1 N N N N N N -15.134 -0.467 -15.064 2.033 -2.067 0.532 CB2 EYG 19 EYG CD1 CD1 C 0 1 Y N N N N N -13.114 0.116 -13.559 3.195 -0.259 -0.718 CD1 EYG 20 EYG CD2 CD2 C 0 1 Y N N N N N -13.397 1.005 -15.794 4.260 -1.212 1.236 CD2 EYG 21 EYG CE1 CE1 C 0 1 Y N N N N N -11.975 0.835 -13.379 4.271 0.584 -0.886 CE1 EYG 22 EYG CE2 CE2 C 0 1 Y N N N N N -12.256 1.760 -15.595 5.330 -0.364 1.059 CE2 EYG 23 EYG CG2 CG2 C 0 1 Y N N N N N -13.896 0.225 -14.766 3.179 -1.165 0.348 CG2 EYG 24 EYG H HN11 H 0 0 N N N Y Y N -17.623 -4.511 -10.854 -3.740 0.993 0.129 HN11 EYG 25 EYG H2 HN12 H 0 0 N Y N Y Y N -18.629 -3.923 -11.998 -3.329 0.503 -1.406 HN12 EYG 26 EYG OXT OXT O 0 1 N Y N Y N Y -19.532 -3.371 -12.644 -4.876 -2.537 0.554 OXT EYG 27 EYG HB HB H 0 1 N N N N N N -16.301 -1.490 -10.137 -1.483 2.085 -1.500 HB EYG 28 EYG HBA HBA H 0 1 N N N N N N -16.335 -3.235 -9.616 -0.194 1.960 -0.280 HBA EYG 29 EYG HE HE H 0 1 N N N N N N -17.931 -0.471 -5.718 -3.427 5.522 0.907 HE EYG 30 EYG HEA HEA H 0 1 N N N N N N -19.297 -0.561 -6.881 -2.137 5.397 2.127 HEA EYG 31 EYG HEB HEB H 0 1 N N N N N N -18.609 -2.068 -6.186 -2.092 6.700 0.915 HEB EYG 32 EYG HG HG H 0 1 N N N N N N -18.881 -1.526 -9.575 -3.062 2.858 0.248 HG EYG 33 EYG HGA HGA H 0 1 N N N N N N -18.533 -3.007 -8.679 -1.773 2.733 1.469 HGA EYG 34 EYG HOH HOH H 0 1 N N N N N N -10.184 2.871 -14.943 6.307 2.218 0.291 HOH EYG 35 EYG HO13 HO13 H 0 0 N N N N N N -18.212 -0.513 -11.667 -0.597 -0.958 -2.809 HO13 EYG 36 EYG HN2 HN23 H 0 0 N N N Y N N -15.990 -0.379 -12.585 1.054 0.294 -0.584 HN23 EYG 37 EYG HA1 H13 H 0 1 N N N Y N N -16.434 -2.312 -10.955 -1.621 0.329 0.991 H13 EYG 38 EYG HA31 HAG H 0 1 N N N Y N N -18.355 -4.584 -13.641 -2.711 -3.500 -0.881 HAG EYG 39 EYG HA32 HAGA H 0 0 N N N Y N N -18.603 -3.913 -15.329 -3.210 -1.939 -1.576 HAGA EYG 40 EYG HB2 HB2 H 0 1 N N N N N N -15.464 -0.332 -16.083 2.164 -3.009 1.045 HB2 EYG 41 EYG HD1 HD1 H 0 1 N N N N N N -13.442 -0.554 -12.778 2.365 -0.221 -1.409 HD1 EYG 42 EYG HD2 HD2 H 0 1 N N N N N N -13.898 1.024 -16.751 4.254 -1.913 2.058 HD2 EYG 43 EYG HE1 HE1 H 0 1 N N N N N N -11.425 0.764 -12.452 4.284 1.284 -1.709 HE1 EYG 44 EYG HE2 HE2 H 0 1 N N N N N N -11.919 2.435 -16.368 6.165 -0.400 1.744 HE2 EYG 45 EYG HXT HXT H 0 1 N Y N Y N Y -19.912 -4.025 -12.069 -5.370 -2.339 1.362 HXT EYG 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EYG O3 C3 DOUB N N 1 EYG CA1 N1 SING N N 2 EYG N1 H SING N N 3 EYG C2 CA2 SING N N 4 EYG C2 N3 SING N N 5 EYG O2 C2 DOUB N N 6 EYG N3 C1 SING N N 7 EYG CB CG SING N N 8 EYG SD CE SING N N 9 EYG CG SD SING N N 10 EYG CZ OH SING N N 11 EYG CZ CE1 SING Y N 12 EYG C1 O13 SING N N 13 EYG C1 CA1 SING N N 14 EYG N2 C1 SING N N 15 EYG CA1 CB SING N N 16 EYG CA3 C3 SING N N 17 EYG CA3 N3 SING N N 18 EYG CA2 N2 SING N N 19 EYG CB2 CA2 DOUB N N 20 EYG CB2 CG2 SING N N 21 EYG CD1 CE1 DOUB Y N 22 EYG CD2 CE2 SING Y N 23 EYG CD2 CG2 DOUB Y N 24 EYG CE2 CZ DOUB Y N 25 EYG CG2 CD1 SING Y N 26 EYG C3 OXT SING N N 27 EYG N1 H2 SING N N 28 EYG CB HB SING N N 29 EYG CB HBA SING N N 30 EYG CE HE SING N N 31 EYG CE HEA SING N N 32 EYG CE HEB SING N N 33 EYG CG HG SING N N 34 EYG CG HGA SING N Z 35 EYG OH HOH SING N N 36 EYG O13 HO13 SING N N 37 EYG N2 HN2 SING N N 38 EYG CA1 HA1 SING N N 39 EYG CA3 HA31 SING N N 40 EYG CA3 HA32 SING N N 41 EYG CB2 HB2 SING N N 42 EYG CD1 HD1 SING N N 43 EYG CD2 HD2 SING N N 44 EYG CE1 HE1 SING N N 45 EYG CE2 HE2 SING N N 46 EYG OXT HXT SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EYG SMILES ACDLabs 12.01 "O=C(O)CN1C(=O)/C(NC1(O)C(N)CCSC)=C/c2ccc(O)cc2" EYG SMILES_CANONICAL CACTVS 3.370 "CSCC[C@@H](N)[C@@]1(O)NC(=C/c2ccc(O)cc2)\C(=O)N1CC(O)=O" EYG SMILES CACTVS 3.370 "CSCC[CH](N)[C]1(O)NC(=Cc2ccc(O)cc2)C(=O)N1CC(O)=O" EYG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CSCCC([C@]1(N/C(=C\c2ccc(cc2)O)/C(=O)N1CC(=O)O)O)N" EYG SMILES "OpenEye OEToolkits" 1.7.0 "CSCCC(C1(NC(=Cc2ccc(cc2)O)C(=O)N1CC(=O)O)O)N" EYG InChI InChI 1.03 "InChI=1S/C16H21N3O5S/c1-25-7-6-13(17)16(24)18-12(15(23)19(16)9-14(21)22)8-10-2-4-11(20)5-3-10/h2-5,8,13,18,20,24H,6-7,9,17H2,1H3,(H,21,22)/b12-8-/t13-,16-/m1/s1" EYG InChIKey InChI 1.03 AMSPVJMTHMWJGL-UHQRNEECSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EYG "SYSTEMATIC NAME" ACDLabs 12.01 "[(2R,4Z)-2-[(1R)-1-amino-3-(methylsulfanyl)propyl]-2-hydroxy-4-(4-hydroxybenzylidene)-5-oxoimidazolidin-1-yl]acetic acid" EYG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-[(2R,4Z)-2-(1-azanyl-3-methylsulfanyl-propyl)-2-hydroxy-4-[(4-hydroxyphenyl)methylidene]-5-oxo-imidazolidin-1-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EYG "Create component" 2010-08-24 RCSB EYG "Modify aromatic_flag" 2011-06-04 RCSB EYG "Modify descriptor" 2011-06-04 RCSB EYG "Modify synonyms" 2021-03-01 PDBE EYG "Modify backbone" 2023-11-03 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EYG _pdbx_chem_comp_synonyms.name "CHROMOPHORE (MET-TYR-GLY)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? #