data_F00 # _chem_comp.id F00 _chem_comp.name "(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-4-undec-10-enoxy-oxane-2,3,5-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H32 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-02-28 _chem_comp.pdbx_modified_date 2020-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 332.432 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F00 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6M2L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F00 C4 C1 C 0 1 N N R -26.423 -45.771 -0.702 4.213 -1.075 -0.304 C4 F00 1 F00 C5 C2 C 0 1 N N R -27.630 -46.464 -1.318 5.573 -0.612 0.224 C5 F00 2 F00 C6 C3 C 0 1 N N N -28.906 -45.947 -0.721 6.634 -1.665 -0.104 C6 F00 3 F00 C3 C4 C 0 1 N N S -25.241 -46.485 -1.326 3.168 0.010 -0.026 C3 F00 4 F00 CAM C5 C 0 1 N N N -23.821 -46.489 0.691 0.779 0.123 0.128 CAM F00 5 F00 CAN C6 C 0 1 N N N -22.386 -47.044 1.007 -0.505 -0.358 -0.552 CAN F00 6 F00 CAO C7 C 0 1 N N N -22.318 -47.570 2.453 -1.718 0.184 0.208 CAO F00 7 F00 CAP C8 C 0 1 N N N -20.961 -47.209 3.131 -3.001 -0.297 -0.472 CAP F00 8 F00 CAQ C9 C 0 1 N N N -20.706 -48.117 4.337 -4.214 0.245 0.287 CAQ F00 9 F00 CAR C10 C 0 1 N N N -20.658 -47.321 5.635 -5.498 -0.236 -0.392 CAR F00 10 F00 CAS C11 C 0 1 N N N -22.074 -47.189 6.170 -6.711 0.306 0.367 CAS F00 11 F00 CAT C12 C 0 1 N N N -22.050 -46.492 7.519 -7.994 -0.176 -0.312 CAT F00 12 F00 CAU C13 C 0 1 N N N -23.270 -46.899 8.326 -9.207 0.366 0.447 CAU F00 13 F00 CAV C14 C 0 1 N N N -24.571 -46.264 7.700 -10.472 -0.108 -0.222 CAV F00 14 F00 CAW C15 C 0 1 N N N -25.565 -45.784 8.464 -11.377 -0.754 0.470 CAW F00 15 F00 C1 C16 C 0 1 N N S -26.506 -46.324 -3.490 5.008 1.693 -0.128 C1 F00 16 F00 O1 O1 O 0 1 N N N -26.519 -47.575 -4.050 4.923 1.910 1.282 O1 F00 17 F00 C2 C17 C 0 1 N N R -25.208 -46.054 -2.754 3.626 1.321 -0.671 C2 F00 18 F00 O2 O2 O 0 1 N N N -24.150 -46.766 -3.383 2.694 2.358 -0.356 O2 F00 19 F00 O3 O3 O 0 1 N N N -23.973 -46.235 -0.723 1.911 -0.383 -0.581 O3 F00 20 F00 O4 O4 O 0 1 N N N -26.463 -45.940 0.645 3.832 -2.285 0.355 O4 F00 21 F00 O5 O5 O 0 1 N N N -27.685 -46.188 -2.698 5.925 0.628 -0.393 O5 F00 22 F00 O6 O6 O 0 1 N N N -29.981 -46.394 -1.512 7.878 -1.288 0.489 O6 F00 23 F00 H1 H1 H 0 1 N N N -26.415 -44.709 -0.990 4.279 -1.250 -1.377 H1 F00 24 F00 H2 H2 H 0 1 N N N -27.555 -47.547 -1.139 5.517 -0.477 1.304 H2 F00 25 F00 H3 H3 H 0 1 N N N -28.889 -44.847 -0.704 6.320 -2.631 0.291 H3 F00 26 F00 H4 H4 H 0 1 N N N -29.017 -46.327 0.305 6.753 -1.735 -1.185 H4 F00 27 F00 H5 H5 H 0 1 N N N -25.445 -47.565 -1.298 3.063 0.148 1.050 H5 F00 28 F00 H6 H6 H 0 1 N N N -23.975 -45.551 1.244 0.805 1.213 0.124 H6 F00 29 F00 H7 H7 H 0 1 N N N -24.571 -47.229 1.007 0.803 -0.238 1.156 H7 F00 30 F00 H8 H8 H 0 1 N N N -22.154 -47.864 0.312 -0.529 0.003 -1.580 H8 F00 31 F00 H9 H9 H 0 1 N N N -21.650 -46.237 0.880 -0.531 -1.448 -0.548 H9 F00 32 F00 H10 H10 H 0 1 N N N -23.138 -47.123 3.035 -1.694 -0.177 1.236 H10 F00 33 F00 H11 H11 H 0 1 N N N -22.431 -48.664 2.441 -1.691 1.273 0.204 H11 F00 34 F00 H12 H12 H 0 1 N N N -20.147 -47.338 2.403 -3.026 0.064 -1.500 H12 F00 35 F00 H13 H13 H 0 1 N N N -20.991 -46.162 3.466 -3.028 -1.387 -0.468 H13 F00 36 F00 H14 H14 H 0 1 N N N -21.515 -48.859 4.403 -4.190 -0.116 1.316 H14 F00 37 F00 H15 H15 H 0 1 N N N -19.745 -48.633 4.199 -4.188 1.334 0.284 H15 F00 38 F00 H16 H16 H 0 1 N N N -20.031 -47.847 6.370 -5.522 0.124 -1.420 H16 F00 39 F00 H17 H17 H 0 1 N N N -20.239 -46.322 5.443 -5.524 -1.326 -0.389 H17 F00 40 F00 H18 H18 H 0 1 N N N -22.678 -46.599 5.465 -6.687 -0.055 1.395 H18 F00 41 F00 H19 H19 H 0 1 N N N -22.516 -48.190 6.284 -6.684 1.395 0.364 H19 F00 42 F00 H20 H20 H 0 1 N N N -21.139 -46.780 8.063 -8.019 0.185 -1.340 H20 F00 43 F00 H21 H21 H 0 1 N N N -22.058 -45.402 7.368 -8.021 -1.265 -0.309 H21 F00 44 F00 H22 H22 H 0 1 N N N -23.361 -47.995 8.320 -9.183 0.006 1.475 H22 F00 45 F00 H23 H23 H 0 1 N N N -23.155 -46.546 9.362 -9.181 1.456 0.444 H23 F00 46 F00 H24 H24 H 0 1 N N N -24.665 -46.214 6.625 -10.632 0.086 -1.273 H24 F00 47 F00 H25 H25 H 0 1 N N N -26.442 -45.356 8.002 -12.283 -1.094 -0.009 H25 F00 48 F00 H26 H26 H 0 1 N N N -25.487 -45.826 9.540 -11.216 -0.947 1.520 H26 F00 49 F00 H27 H27 H 0 1 N N N -26.564 -45.583 -4.301 5.358 2.603 -0.616 H27 F00 50 F00 H28 H28 H 0 1 N N N -27.343 -47.712 -4.502 5.765 2.150 1.694 H28 F00 51 F00 H29 H29 H 0 1 N N N -25.004 -44.974 -2.793 3.681 1.196 -1.753 H29 F00 52 F00 H30 H30 H 0 1 N N N -23.336 -46.597 -2.922 2.925 3.220 -0.729 H30 F00 53 F00 H31 H31 H 0 1 N N N -27.215 -45.480 1.000 4.451 -3.016 0.223 H31 F00 54 F00 H32 H32 H 0 1 N N N -30.798 -46.075 -1.147 8.598 -1.912 0.321 H32 F00 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F00 O1 C1 SING N N 1 F00 C1 C2 SING N N 2 F00 C1 O5 SING N N 3 F00 O2 C2 SING N N 4 F00 C2 C3 SING N N 5 F00 O5 C5 SING N N 6 F00 O6 C6 SING N N 7 F00 C3 O3 SING N N 8 F00 C3 C4 SING N N 9 F00 C5 C6 SING N N 10 F00 C5 C4 SING N N 11 F00 O3 CAM SING N N 12 F00 C4 O4 SING N N 13 F00 CAM CAN SING N N 14 F00 CAN CAO SING N N 15 F00 CAO CAP SING N N 16 F00 CAP CAQ SING N N 17 F00 CAQ CAR SING N N 18 F00 CAR CAS SING N N 19 F00 CAS CAT SING N N 20 F00 CAT CAU SING N N 21 F00 CAV CAU SING N N 22 F00 CAV CAW DOUB N N 23 F00 C4 H1 SING N N 24 F00 C5 H2 SING N N 25 F00 C6 H3 SING N N 26 F00 C6 H4 SING N N 27 F00 C3 H5 SING N N 28 F00 CAM H6 SING N N 29 F00 CAM H7 SING N N 30 F00 CAN H8 SING N N 31 F00 CAN H9 SING N N 32 F00 CAO H10 SING N N 33 F00 CAO H11 SING N N 34 F00 CAP H12 SING N N 35 F00 CAP H13 SING N N 36 F00 CAQ H14 SING N N 37 F00 CAQ H15 SING N N 38 F00 CAR H16 SING N N 39 F00 CAR H17 SING N N 40 F00 CAS H18 SING N N 41 F00 CAS H19 SING N N 42 F00 CAT H20 SING N N 43 F00 CAT H21 SING N N 44 F00 CAU H22 SING N N 45 F00 CAU H23 SING N N 46 F00 CAV H24 SING N N 47 F00 CAW H25 SING N N 48 F00 CAW H26 SING N N 49 F00 C1 H27 SING N N 50 F00 O1 H28 SING N N 51 F00 C2 H29 SING N N 52 F00 O2 H30 SING N N 53 F00 O4 H31 SING N N 54 F00 O6 H32 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F00 InChI InChI 1.03 "InChI=1S/C17H32O6/c1-2-3-4-5-6-7-8-9-10-11-22-16-14(19)13(12-18)23-17(21)15(16)20/h2,13-21H,1,3-12H2/t13-,14-,15-,16+,17+/m1/s1" F00 InChIKey InChI 1.03 YZRNUMHABGDGTN-MTSZKFMLSA-N F00 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](O)[C@H](O)[C@@H](OCCCCCCCCCC=C)[C@@H]1O" F00 SMILES CACTVS 3.385 "OC[CH]1O[CH](O)[CH](O)[CH](OCCCCCCCCCC=C)[CH]1O" F00 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=CCCCCCCCCCO[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1O)O)CO)O" F00 SMILES "OpenEye OEToolkits" 2.0.7 "C=CCCCCCCCCCOC1C(C(OC(C1O)O)CO)O" # _pdbx_chem_comp_identifier.comp_id F00 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-4-undec-10-enoxy-oxane-2,3,5-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F00 "Create component" 2020-02-28 PDBJ F00 "Initial release" 2020-09-09 RCSB ##