data_F0B # _chem_comp.id F0B _chem_comp.name "(3~{S})-5-oxidanyl-3-[2-[[[1-(phenylmethyl)indol-6-yl]methylamino]methyl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H28 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-16 _chem_comp.pdbx_modified_date 2019-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.601 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F0B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6GJ7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F0B C4 C1 C 0 1 Y N N 10.149 12.860 -19.790 3.521 3.523 -1.079 C4 F0B 1 F0B C5 C2 C 0 1 Y N N 10.429 14.105 -19.216 2.318 2.827 -1.055 C5 F0B 2 F0B C6 C3 C 0 1 Y N N 11.649 14.739 -19.460 2.194 1.676 -0.283 C6 F0B 3 F0B C8 C4 C 0 1 N N N 13.455 12.468 -21.667 5.427 1.214 1.311 C8 F0B 4 F0B C10 C5 C 0 1 Y N N 12.592 14.123 -20.261 3.262 1.229 0.456 C10 F0B 5 F0B C15 C6 C 0 1 Y N N 15.005 14.772 -19.675 3.253 -1.238 0.617 C15 F0B 6 F0B C17 C7 C 0 1 Y N N 15.180 14.074 -18.391 4.172 -1.835 -0.354 C17 F0B 7 F0B C20 C8 C 0 1 Y N N 16.063 13.174 -15.898 5.434 -3.436 -2.222 C20 F0B 8 F0B C21 C9 C 0 1 Y N N 16.744 14.206 -16.517 4.203 -3.817 -1.734 C21 F0B 9 F0B C24 C10 C 0 1 Y N N 16.168 18.637 -25.657 -3.582 2.324 -0.074 C24 F0B 10 F0B C26 C11 C 0 1 Y N N 17.794 17.198 -24.645 -1.749 1.884 1.394 C26 F0B 11 F0B C28 C12 C 0 1 Y N N 16.632 18.814 -23.284 -2.897 0.048 0.352 C28 F0B 12 F0B C11 C13 C 0 1 N N S 13.966 14.512 -20.755 3.460 0.049 1.374 C11 F0B 13 F0B C12 C14 C 0 1 N N N 16.254 16.629 -20.894 0.989 -1.819 1.585 C12 F0B 14 F0B C14 C15 C 0 1 Y N N 15.989 15.690 -19.742 2.187 -2.050 0.700 C14 F0B 15 F0B C16 C16 C 0 1 Y N N 16.307 14.667 -17.766 3.556 -3.021 -0.793 C16 F0B 16 F0B C18 C17 C 0 1 Y N N 14.512 13.029 -17.741 5.420 -1.468 -0.862 C18 F0B 17 F0B C19 C18 C 0 1 Y N N 14.941 12.597 -16.508 6.037 -2.265 -1.785 C19 F0B 18 F0B C23 C19 C 0 1 Y N N 15.931 19.246 -24.403 -3.746 0.944 -0.289 C23 F0B 19 F0B C25 C20 C 0 1 Y N N 17.114 17.603 -25.766 -2.572 2.782 0.775 C25 F0B 20 F0B C27 C21 C 0 1 Y N N 17.563 17.804 -23.406 -1.907 0.521 1.186 C27 F0B 21 F0B C29 C22 C 0 1 N N N 18.276 17.335 -22.163 -0.987 -0.451 1.878 C29 F0B 22 F0B C3 C23 C 0 1 Y N N 11.082 12.235 -20.592 4.597 3.075 -0.345 C3 F0B 23 F0B C30 C24 C 0 1 Y N N 15.277 19.323 -26.596 -4.617 2.985 -0.873 C30 F0B 24 F0B C31 C25 C 0 1 Y N N 14.600 20.254 -25.897 -5.312 2.017 -1.491 C31 F0B 25 F0B C33 C26 C 0 1 N N N 14.391 21.018 -23.491 -5.312 -0.492 -1.648 C33 F0B 26 F0B C34 C27 C 0 1 Y N N 13.595 20.191 -22.494 -6.310 -1.045 -0.664 C34 F0B 27 F0B C35 C28 C 0 1 Y N N 13.497 20.614 -21.171 -7.658 -0.789 -0.830 C35 F0B 28 F0B C36 C29 C 0 1 Y N N 12.757 19.883 -20.244 -8.574 -1.296 0.073 C36 F0B 29 F0B C37 C30 C 0 1 Y N N 12.093 18.725 -20.632 -8.141 -2.059 1.142 C37 F0B 30 F0B C38 C31 C 0 1 Y N N 12.167 18.307 -21.954 -6.793 -2.315 1.307 C38 F0B 31 F0B C39 C32 C 0 1 Y N N 12.911 19.040 -22.879 -5.878 -1.813 0.401 C39 F0B 32 F0B C9 C33 C 0 1 Y N N 12.304 12.873 -20.849 4.476 1.923 0.437 C9 F0B 33 F0B N13 N1 N 0 1 Y N N 16.773 15.629 -18.623 2.349 -3.119 -0.138 N13 F0B 34 F0B N22 N2 N 0 1 N N N 17.523 16.230 -21.534 0.128 -0.792 0.984 N22 F0B 35 F0B N32 N3 N 0 1 Y N N 14.962 20.204 -24.577 -4.803 0.791 -1.159 N32 F0B 36 F0B N7 N4 N 0 1 N N N 14.408 13.413 -21.613 4.843 0.133 1.856 N7 F0B 37 F0B O1 O1 O 0 1 N N N 9.507 14.677 -18.403 1.264 3.271 -1.785 O1 F0B 38 F0B O2 O2 O 0 1 N N N 13.529 11.428 -22.299 6.575 1.560 1.513 O2 F0B 39 F0B H1 H1 H 0 1 N N N 9.197 12.385 -19.604 3.614 4.416 -1.680 H1 F0B 40 F0B H2 H2 H 0 1 N N N 11.855 15.706 -19.025 1.259 1.136 -0.264 H2 F0B 41 F0B H3 H3 H 0 1 N N N 16.398 12.810 -14.938 5.934 -4.055 -2.952 H3 F0B 42 F0B H4 H4 H 0 1 N N N 17.605 14.653 -16.042 3.741 -4.729 -2.081 H4 F0B 43 F0B H5 H5 H 0 1 N N N 18.518 16.400 -24.721 -0.968 2.238 2.051 H5 F0B 44 F0B H6 H6 H 0 1 N N N 16.448 19.268 -22.321 -3.012 -1.014 0.196 H6 F0B 45 F0B H7 H7 H 0 1 N N N 13.869 15.423 -21.364 2.766 0.106 2.213 H7 F0B 46 F0B H8 H8 H 0 1 N N N 16.333 17.661 -20.522 0.429 -2.748 1.689 H8 F0B 47 F0B H9 H9 H 0 1 N N N 15.433 16.564 -21.623 1.323 -1.484 2.568 H9 F0B 48 F0B H10 H10 H 0 1 N N N 13.658 12.561 -18.209 5.895 -0.558 -0.527 H10 F0B 49 F0B H11 H11 H 0 1 N N N 14.408 11.805 -16.004 7.002 -1.980 -2.178 H11 F0B 50 F0B H12 H12 H 0 1 N N N 17.303 17.133 -26.720 -2.443 3.841 0.942 H12 F0B 51 F0B H13 H13 H 0 1 N N N 19.283 16.983 -22.432 -0.597 0.003 2.789 H13 F0B 52 F0B H14 H14 H 0 1 N N N 18.357 18.171 -21.453 -1.539 -1.356 2.131 H14 F0B 53 F0B H15 H15 H 0 1 N N N 10.873 11.264 -21.017 5.530 3.618 -0.367 H15 F0B 54 F0B H16 H16 H 0 1 N N N 15.181 19.120 -27.652 -4.792 4.048 -0.946 H16 F0B 55 F0B H17 H17 H 0 1 N N N 13.878 20.939 -26.316 -6.147 2.182 -2.156 H17 F0B 56 F0B H18 H18 H 0 1 N N N 15.212 21.518 -22.957 -4.484 -1.193 -1.759 H18 F0B 57 F0B H19 H19 H 0 1 N N N 13.725 21.775 -23.931 -5.796 -0.347 -2.614 H19 F0B 58 F0B H20 H20 H 0 1 N N N 14.000 21.518 -20.860 -7.996 -0.193 -1.664 H20 F0B 59 F0B H21 H21 H 0 1 N N N 12.699 20.218 -19.219 -9.627 -1.096 -0.056 H21 F0B 60 F0B H22 H22 H 0 1 N N N 11.525 18.156 -19.912 -8.857 -2.455 1.847 H22 F0B 61 F0B H23 H23 H 0 1 N N N 11.648 17.413 -22.267 -6.455 -2.911 2.142 H23 F0B 62 F0B H24 H24 H 0 1 N N N 12.957 18.711 -23.907 -4.825 -2.017 0.528 H24 F0B 63 F0B H25 H25 H 0 1 N N N 17.573 16.205 -18.454 1.711 -3.841 -0.250 H25 F0B 64 F0B H26 H26 H 0 1 N N N 17.315 15.554 -22.241 -0.210 -1.087 0.081 H26 F0B 65 F0B H28 H28 H 0 1 N N N 15.287 13.371 -22.088 5.268 -0.491 2.466 H28 F0B 66 F0B H29 H29 H 0 1 N N N 9.834 15.512 -18.091 1.227 2.911 -2.681 H29 F0B 67 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F0B C30 C31 DOUB Y N 1 F0B C30 C24 SING Y N 2 F0B C31 N32 SING Y N 3 F0B C25 C24 DOUB Y N 4 F0B C25 C26 SING Y N 5 F0B C24 C23 SING Y N 6 F0B C26 C27 DOUB Y N 7 F0B N32 C23 SING Y N 8 F0B N32 C33 SING N N 9 F0B C23 C28 DOUB Y N 10 F0B C33 C34 SING N N 11 F0B C27 C28 SING Y N 12 F0B C27 C29 SING N N 13 F0B C39 C34 DOUB Y N 14 F0B C39 C38 SING Y N 15 F0B C34 C35 SING Y N 16 F0B O2 C8 DOUB N N 17 F0B C29 N22 SING N N 18 F0B C38 C37 DOUB Y N 19 F0B C8 N7 SING N N 20 F0B C8 C9 SING N N 21 F0B N7 C11 SING N N 22 F0B N22 C12 SING N N 23 F0B C35 C36 DOUB Y N 24 F0B C12 C14 SING N N 25 F0B C9 C3 DOUB Y N 26 F0B C9 C10 SING Y N 27 F0B C11 C10 SING N N 28 F0B C11 C15 SING N N 29 F0B C37 C36 SING Y N 30 F0B C3 C4 SING Y N 31 F0B C10 C6 DOUB Y N 32 F0B C4 C5 DOUB Y N 33 F0B C14 C15 DOUB Y N 34 F0B C14 N13 SING Y N 35 F0B C15 C17 SING Y N 36 F0B C6 C5 SING Y N 37 F0B C5 O1 SING N N 38 F0B N13 C16 SING Y N 39 F0B C17 C16 DOUB Y N 40 F0B C17 C18 SING Y N 41 F0B C16 C21 SING Y N 42 F0B C18 C19 DOUB Y N 43 F0B C21 C20 DOUB Y N 44 F0B C19 C20 SING Y N 45 F0B C4 H1 SING N N 46 F0B C6 H2 SING N N 47 F0B C20 H3 SING N N 48 F0B C21 H4 SING N N 49 F0B C26 H5 SING N N 50 F0B C28 H6 SING N N 51 F0B C11 H7 SING N N 52 F0B C12 H8 SING N N 53 F0B C12 H9 SING N N 54 F0B C18 H10 SING N N 55 F0B C19 H11 SING N N 56 F0B C25 H12 SING N N 57 F0B C29 H13 SING N N 58 F0B C29 H14 SING N N 59 F0B C3 H15 SING N N 60 F0B C30 H16 SING N N 61 F0B C31 H17 SING N N 62 F0B C33 H18 SING N N 63 F0B C33 H19 SING N N 64 F0B C35 H20 SING N N 65 F0B C36 H21 SING N N 66 F0B C37 H22 SING N N 67 F0B C38 H23 SING N N 68 F0B C39 H24 SING N N 69 F0B N13 H25 SING N N 70 F0B N22 H26 SING N N 71 F0B N7 H28 SING N N 72 F0B O1 H29 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F0B InChI InChI 1.03 "InChI=1S/C33H28N4O2/c38-24-12-13-25-27(17-24)32(36-33(25)39)31-26-8-4-5-9-28(26)35-29(31)19-34-18-22-10-11-23-14-15-37(30(23)16-22)20-21-6-2-1-3-7-21/h1-17,32,34-35,38H,18-20H2,(H,36,39)/t32-/m0/s1" F0B InChIKey InChI 1.03 ODHMZVFKZVCZOB-YTTGMZPUSA-N F0B SMILES_CANONICAL CACTVS 3.385 "Oc1ccc2C(=O)N[C@@H](c2c1)c3c(CNCc4ccc5ccn(Cc6ccccc6)c5c4)[nH]c7ccccc37" F0B SMILES CACTVS 3.385 "Oc1ccc2C(=O)N[CH](c2c1)c3c(CNCc4ccc5ccn(Cc6ccccc6)c5c4)[nH]c7ccccc37" F0B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)Cn2ccc3c2cc(cc3)CNCc4c(c5ccccc5[nH]4)[C@@H]6c7cc(ccc7C(=O)N6)O" F0B SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)Cn2ccc3c2cc(cc3)CNCc4c(c5ccccc5[nH]4)C6c7cc(ccc7C(=O)N6)O" # _pdbx_chem_comp_identifier.comp_id F0B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(3~{S})-5-oxidanyl-3-[2-[[[1-(phenylmethyl)indol-6-yl]methylamino]methyl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F0B "Create component" 2018-05-16 EBI F0B "Initial release" 2019-07-31 RCSB ##