data_F0L # _chem_comp.id F0L _chem_comp.name nickel-sirohydrochlorin _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H44 N4 Ni O16" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2020-03-05 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 919.509 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F0L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 6M2F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F0L C10 C1 C 0 1 Y N N -24.506 6.319 1.866 ? ? ? C10 F0L 1 F0L O59 O1 O 0 1 N N N -27.478 3.974 -3.522 ? ? ? O59 F0L 2 F0L C57 C2 C 0 1 N N N -27.696 3.265 -2.513 ? ? ? C57 F0L 3 F0L O58 O2 O 0 1 N N N -27.823 2.032 -2.516 ? ? ? O58 F0L 4 F0L C56 C3 C 0 1 N N N -27.834 3.926 -1.186 ? ? ? C56 F0L 5 F0L C55 C4 C 0 1 N N N -28.575 3.016 -0.191 ? ? ? C55 F0L 6 F0L C6 C5 C 0 1 N N S -28.347 3.406 1.276 ? ? ? C6 F0L 7 F0L C5 C6 C 0 1 N N N -28.500 4.892 1.454 ? ? ? C5 F0L 8 F0L C4 C7 C 0 1 N N N -29.592 5.647 1.607 ? ? ? C4 F0L 9 F0L C3 C8 C 0 1 N N N -29.866 6.336 0.331 ? ? ? C3 F0L 10 F0L C2 C9 C 0 1 N N S -31.022 6.052 -0.568 ? ? ? C2 F0L 11 F0L C1 C10 C 0 1 N N N -30.601 5.039 -1.647 ? ? ? C1 F0L 12 F0L C60 C11 C 0 1 N N N -32.291 5.747 0.246 ? ? ? C60 F0L 13 F0L C61 C12 C 0 1 N N N -32.928 4.482 -0.260 ? ? ? C61 F0L 14 F0L O62 O3 O 0 1 N N N -33.104 3.535 0.542 ? ? ? O62 F0L 15 F0L O63 O4 O 0 1 N N N -33.232 4.435 -1.470 ? ? ? O63 F0L 16 F0L C7 C13 C 0 1 N N S -26.898 3.203 1.750 ? ? ? C7 F0L 17 F0L C50 C14 C 0 1 N N N -26.071 2.367 0.766 ? ? ? C50 F0L 18 F0L C51 C15 C 0 1 N N N -26.945 2.574 3.146 ? ? ? C51 F0L 19 F0L C52 C16 C 0 1 N N N -25.763 1.658 3.397 ? ? ? C52 F0L 20 F0L O53 O5 O 0 1 N N N -25.709 0.562 2.774 ? ? ? O53 F0L 21 F0L O54 O6 O 0 1 N N N -24.887 2.048 4.211 ? ? ? O54 F0L 22 F0L C8 C17 C 0 1 N N N -26.380 4.637 1.809 ? ? ? C8 F0L 23 F0L C9 C18 C 0 1 N N N -25.180 5.052 2.256 ? ? ? C9 F0L 24 F0L C11 C19 C 0 1 Y N N -23.114 6.695 2.256 ? ? ? C11 F0L 25 F0L C46 C20 C 0 1 N N N -22.100 5.916 3.071 ? ? ? C46 F0L 26 F0L C47 C21 C 0 1 N N N -21.596 4.709 2.305 ? ? ? C47 F0L 27 F0L O48 O7 O 0 1 N N N -21.490 4.797 1.052 ? ? ? O48 F0L 28 F0L O49 O8 O 0 1 N N N -21.298 3.678 2.966 ? ? ? O49 F0L 29 F0L C12 C22 C 0 1 Y N N -22.916 8.026 1.636 ? ? ? C12 F0L 30 F0L C41 C23 C 0 1 N N N -21.655 8.843 1.756 ? ? ? C41 F0L 31 F0L C42 C24 C 0 1 N N N -21.300 9.643 0.514 ? ? ? C42 F0L 32 F0L C43 C25 C 0 1 N N N -20.148 10.547 0.909 ? ? ? C43 F0L 33 F0L O44 O9 O 0 1 N N N -19.494 10.143 1.943 ? ? ? O44 F0L 34 F0L O45 O10 O 0 1 N N N -19.937 11.602 0.189 ? ? ? O45 F0L 35 F0L N14 N1 N 0 1 Y N N -25.076 7.287 1.109 ? ? ? N14 F0L 36 F0L C13 C26 C 0 1 Y N N -24.217 8.312 0.949 ? ? ? C13 F0L 37 F0L C29 C27 C 0 1 N N N -24.536 9.547 0.192 ? ? ? C29 F0L 38 F0L N16 N2 N 0 1 N N N -27.313 5.459 1.337 ? ? ? N16 F0L 39 F0L NI NI1 NI 2 0 N N N -27.062 7.230 0.359 ? ? ? NI F0L 40 F0L N17 N3 N 0 1 N N N -29.045 7.195 -0.152 ? ? ? N17 F0L 41 F0L N27 N4 N 0 1 N N N -26.859 9.091 -0.635 ? ? ? N27 F0L 42 F0L C28 C28 C 0 1 N N N -25.767 9.877 -0.573 ? ? ? C28 F0L 43 F0L C30 C29 C 0 1 N N N -25.954 11.121 -1.382 ? ? ? C30 F0L 44 F0L C36 C30 C 0 1 N N N -24.977 12.254 -1.594 ? ? ? C36 F0L 45 F0L C37 C31 C 0 1 N N N -24.440 12.803 -0.270 ? ? ? C37 F0L 46 F0L C38 C32 C 0 1 N N N -23.561 13.992 -0.598 ? ? ? C38 F0L 47 F0L O39 O11 O 0 1 N N N -23.978 14.669 -1.607 ? ? ? O39 F0L 48 F0L O40 O12 O 0 1 N N N -22.507 14.208 0.127 ? ? ? O40 F0L 49 F0L C31 C33 C 0 1 N N N -27.325 10.968 -1.958 ? ? ? C31 F0L 50 F0L C32 C34 C 0 1 N N N -28.073 11.943 -2.846 ? ? ? C32 F0L 51 F0L C33 C35 C 0 1 N N N -29.320 12.396 -2.096 ? ? ? C33 F0L 52 F0L O34 O13 O 0 1 N N N -29.276 12.440 -0.842 ? ? ? O34 F0L 53 F0L O35 O14 O 0 1 N N N -30.357 12.684 -2.740 ? ? ? O35 F0L 54 F0L C26 C36 C 0 1 N N N -27.808 9.661 -1.408 ? ? ? C26 F0L 55 F0L C25 C37 C 0 1 N N N -29.133 9.035 -1.686 ? ? ? C25 F0L 56 F0L C18 C38 C 0 1 N N N -29.656 7.983 -1.024 ? ? ? C18 F0L 57 F0L C19 C39 C 0 1 N N S -31.075 7.479 -1.047 ? ? ? C19 F0L 58 F0L C14 C40 C 0 1 N N N -31.971 7.827 -2.201 ? ? ? C14 F0L 59 F0L C71 C41 C 0 1 N N N -32.753 8.696 -1.223 ? ? ? C71 F0L 60 F0L C72 C42 C 0 1 N N N -34.251 8.469 -1.265 ? ? ? C72 F0L 61 F0L O2 O15 O 0 1 N N N -34.743 8.455 -2.409 ? ? ? O2 F0L 62 F0L O01 O16 O 0 1 N N N -34.963 8.354 -0.220 ? ? ? O01 F0L 63 F0L H1 H1 H 0 1 N N N -27.729 1.706 -3.403 ? ? ? H1 F0L 64 F0L H2 H2 H 0 1 N N N -26.833 4.151 -0.790 ? ? ? H2 F0L 65 F0L H3 H3 H 0 1 N N N -28.399 4.862 -1.307 ? ? ? H3 F0L 66 F0L H4 H4 H 0 1 N N N -29.653 3.072 -0.403 ? ? ? H4 F0L 67 F0L H5 H5 H 0 1 N N N -28.226 1.983 -0.336 ? ? ? H5 F0L 68 F0L H6 H6 H 0 1 N N N -30.175 5.738 2.511 ? ? ? H6 F0L 69 F0L H7 H7 H 0 1 N N N -30.588 4.027 -1.216 ? ? ? H7 F0L 70 F0L H8 H8 H 0 1 N N N -31.317 5.073 -2.481 ? ? ? H8 F0L 71 F0L H9 H9 H 0 1 N N N -29.596 5.293 -2.016 ? ? ? H9 F0L 72 F0L H10 H10 H 0 1 N N N -32.024 5.623 1.306 ? ? ? H10 F0L 73 F0L H11 H11 H 0 1 N N N -33.001 6.581 0.142 ? ? ? H11 F0L 74 F0L H12 H12 H 0 1 N N N -33.496 2.800 0.084 ? ? ? H12 F0L 75 F0L H13 H13 H 0 1 N N N -25.047 2.253 1.152 ? ? ? H13 F0L 76 F0L H14 H14 H 0 1 N N N -26.532 1.375 0.650 ? ? ? H14 F0L 77 F0L H15 H15 H 0 1 N N N -26.041 2.873 -0.210 ? ? ? H15 F0L 78 F0L H16 H16 H 0 1 N N N -26.938 3.377 3.898 ? ? ? H16 F0L 79 F0L H17 H17 H 0 1 N N N -27.873 1.991 3.242 ? ? ? H17 F0L 80 F0L H18 H18 H 0 1 N N N -24.199 1.395 4.274 ? ? ? H18 F0L 81 F0L H19 H19 H 0 1 N N N -24.664 4.412 2.956 ? ? ? H19 F0L 82 F0L H20 H20 H 0 1 N N N -21.249 6.572 3.308 ? ? ? H20 F0L 83 F0L H21 H21 H 0 1 N N N -22.573 5.577 4.004 ? ? ? H21 F0L 84 F0L H22 H22 H 0 1 N N N -20.990 3.001 2.375 ? ? ? H22 F0L 85 F0L H23 H23 H 0 1 N N N -20.822 8.158 1.973 ? ? ? H23 F0L 86 F0L H24 H24 H 0 1 N N N -21.780 9.546 2.593 ? ? ? H24 F0L 87 F0L H25 H25 H 0 1 N N N -22.162 10.244 0.188 ? ? ? H25 F0L 88 F0L H26 H26 H 0 1 N N N -20.994 8.969 -0.300 ? ? ? H26 F0L 89 F0L H27 H27 H 0 1 N N N -18.789 10.752 2.130 ? ? ? H27 F0L 90 F0L H28 H28 H 0 1 N N N -23.771 10.309 0.197 ? ? ? H28 F0L 91 F0L H29 H29 H 0 1 N N N -24.132 11.887 -2.195 ? ? ? H29 F0L 92 F0L H30 H30 H 0 1 N N N -25.486 13.066 -2.135 ? ? ? H30 F0L 93 F0L H31 H31 H 0 1 N N N -25.275 13.118 0.373 ? ? ? H31 F0L 94 F0L H32 H32 H 0 1 N N N -23.851 12.031 0.246 ? ? ? H32 F0L 95 F0L H33 H33 H 0 1 N N N -22.051 14.975 -0.198 ? ? ? H33 F0L 96 F0L H34 H34 H 0 1 N N N -28.361 11.448 -3.785 ? ? ? H34 F0L 97 F0L H35 H35 H 0 1 N N N -27.435 12.811 -3.069 ? ? ? H35 F0L 98 F0L H36 H36 H 0 1 N N N -30.121 12.714 -0.504 ? ? ? H36 F0L 99 F0L H37 H37 H 0 1 N N N -29.723 9.460 -2.485 ? ? ? H37 F0L 100 F0L H38 H38 H 0 1 N N N -32.535 6.980 -2.619 ? ? ? H38 F0L 101 F0L H39 H39 H 0 1 N N N -31.480 8.378 -3.017 ? ? ? H39 F0L 102 F0L H40 H40 H 0 1 N N N -32.398 8.478 -0.205 ? ? ? H40 F0L 103 F0L H41 H41 H 0 1 N N N -32.555 9.751 -1.462 ? ? ? H41 F0L 104 F0L H42 H42 H 0 1 N N N -35.876 8.262 -0.467 ? ? ? H42 F0L 105 F0L H43 H43 H 0 1 N N N -29.043 2.860 1.930 ? ? ? H43 F0L 106 F0L H44 H44 H 0 1 N N N -31.540 8.008 -0.202 ? ? ? H44 F0L 107 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F0L O59 C57 DOUB N N 1 F0L C32 C33 SING N N 2 F0L C32 C31 SING N N 3 F0L O35 C33 DOUB N N 4 F0L O58 C57 SING N N 5 F0L C57 C56 SING N N 6 F0L O2 C72 DOUB N N 7 F0L C14 C71 SING N N 8 F0L C14 C19 SING N N 9 F0L C33 O34 SING N N 10 F0L C31 C26 SING N N 11 F0L C31 C30 DOUB N N 12 F0L C25 C26 SING N N 13 F0L C25 C18 DOUB N N 14 F0L C1 C2 SING N N 15 F0L O39 C38 DOUB N N 16 F0L C36 C30 SING N N 17 F0L C36 C37 SING N N 18 F0L O63 C61 DOUB N N 19 F0L C26 N27 DOUB N N 20 F0L C30 C28 SING N N 21 F0L C72 C71 SING N N 22 F0L C72 O01 SING N N 23 F0L C56 C55 SING N N 24 F0L C19 C18 SING N N 25 F0L C19 C2 SING N N 26 F0L C18 N17 SING N N 27 F0L N27 C28 SING N N 28 F0L N27 NI SING N N 29 F0L C38 C37 SING N N 30 F0L C38 O40 SING N N 31 F0L C28 C29 DOUB N N 32 F0L C2 C60 SING N N 33 F0L C2 C3 SING N N 34 F0L C61 C60 SING N N 35 F0L C61 O62 SING N N 36 F0L C55 C6 SING N N 37 F0L N17 C3 SING N N 38 F0L N17 NI SING N N 39 F0L O45 C43 DOUB N N 40 F0L C29 C13 SING N N 41 F0L C3 C4 DOUB N N 42 F0L NI N14 SING N N 43 F0L NI N16 SING N N 44 F0L C42 C43 SING N N 45 F0L C42 C41 SING N N 46 F0L C50 C7 SING N N 47 F0L C43 O44 SING N N 48 F0L C13 N14 SING Y N 49 F0L C13 C12 DOUB Y N 50 F0L O48 C47 DOUB N N 51 F0L N14 C10 SING Y N 52 F0L C6 C5 SING N N 53 F0L C6 C7 SING N N 54 F0L N16 C5 DOUB N N 55 F0L N16 C8 SING N N 56 F0L C5 C4 SING N N 57 F0L C12 C41 SING N N 58 F0L C12 C11 SING Y N 59 F0L C7 C8 SING N N 60 F0L C7 C51 SING N N 61 F0L C8 C9 DOUB N N 62 F0L C10 C9 SING N N 63 F0L C10 C11 DOUB Y N 64 F0L C11 C46 SING N N 65 F0L C47 O49 SING N N 66 F0L C47 C46 SING N N 67 F0L O53 C52 DOUB N N 68 F0L C51 C52 SING N N 69 F0L C52 O54 SING N N 70 F0L O58 H1 SING N N 71 F0L C56 H2 SING N N 72 F0L C56 H3 SING N N 73 F0L C55 H4 SING N N 74 F0L C55 H5 SING N N 75 F0L C4 H6 SING N N 76 F0L C1 H7 SING N N 77 F0L C1 H8 SING N N 78 F0L C1 H9 SING N N 79 F0L C60 H10 SING N N 80 F0L C60 H11 SING N N 81 F0L O62 H12 SING N N 82 F0L C50 H13 SING N N 83 F0L C50 H14 SING N N 84 F0L C50 H15 SING N N 85 F0L C51 H16 SING N N 86 F0L C51 H17 SING N N 87 F0L O54 H18 SING N N 88 F0L C9 H19 SING N N 89 F0L C46 H20 SING N N 90 F0L C46 H21 SING N N 91 F0L O49 H22 SING N N 92 F0L C41 H23 SING N N 93 F0L C41 H24 SING N N 94 F0L C42 H25 SING N N 95 F0L C42 H26 SING N N 96 F0L O44 H27 SING N N 97 F0L C29 H28 SING N N 98 F0L C36 H29 SING N N 99 F0L C36 H30 SING N N 100 F0L C37 H31 SING N N 101 F0L C37 H32 SING N N 102 F0L O40 H33 SING N N 103 F0L C32 H34 SING N N 104 F0L C32 H35 SING N N 105 F0L O34 H36 SING N N 106 F0L C25 H37 SING N N 107 F0L C14 H38 SING N N 108 F0L C14 H39 SING N N 109 F0L C71 H40 SING N N 110 F0L C71 H41 SING N N 111 F0L O01 H42 SING N N 112 F0L C6 H43 SING N N 113 F0L C19 H44 SING N N 114 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F0L InChI InChI 1.03 "InChI=1S/C42H46N4O16.Ni/c1-41(17-39(59)60)23(5-9-35(51)52)29-14-27-21(11-37(55)56)19(3-7-33(47)48)25(43-27)13-26-20(4-8-34(49)50)22(12-38(57)58)28(44-26)15-31-42(2,18-40(61)62)24(6-10-36(53)54)30(46-31)16-32(41)45-29;/h13-16,23-24H,3-12,17-18H2,1-2H3,(H10,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62);/q;+4/p-2/t23-,24-,41+,42+;/m1./s1" F0L InChIKey InChI 1.03 MENOACMQLVBAQR-QIISWYHFSA-L F0L SMILES_CANONICAL CACTVS 3.385 "C[C@]1(CC(O)=O)[C@H](CCC(O)=O)C2=NC1=Cc3n4[Ni++][N@]5C(=CC6=NC(=Cc4c(CCC(O)=O)c3CC(O)=O)C(=C6CC(O)=O)CCC(O)=O)[C@@H](CCC(O)=O)[C@](C)(CC(O)=O)C5=C2" F0L SMILES CACTVS 3.385 "C[C]1(CC(O)=O)[CH](CCC(O)=O)C2=NC1=Cc3n4[Ni++][N]5C(=CC6=NC(=Cc4c(CCC(O)=O)c3CC(O)=O)C(=C6CC(O)=O)CCC(O)=O)[CH](CCC(O)=O)[C](C)(CC(O)=O)C5=C2" F0L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]1([C@@H](C2=[N]3C1=Cc4c(c(c5n4[Ni+2]36[N]7=C(C=C8N6C(=C2)[C@@]([C@@H]8CCC(=O)O)(C)CC(=O)O)C(=C(C7=C5)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O" F0L SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C(C2=[N]3C1=Cc4c(c(c5n4[Ni+2]36[N]7=C(C=C8N6C(=C2)C(C8CCC(=O)O)(C)CC(=O)O)C(=C(C7=C5)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F0L "Create component" 2020-03-05 PDBJ F0L "Initial release" 2021-01-13 RCSB ##