data_F3D # _chem_comp.id F3D _chem_comp.name "4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H36 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-02-26 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.643 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F3D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6CHZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F3D C1 C1 C 0 1 N N N N N N -30.969 0.261 -29.281 5.177 -2.507 0.289 C1 F3D 1 F3D N1 N1 N 0 1 N N N N N N -33.150 -8.506 -15.907 -10.354 0.034 -0.087 N1 F3D 2 F3D C2 C2 C 0 1 N N N N N N -31.642 -0.152 -27.971 3.782 -1.984 0.061 C2 F3D 3 F3D N2 N2 N 0 1 Y N N N N N -25.346 -1.742 -26.852 7.906 2.886 -0.498 N2 F3D 4 F3D C3 C3 C 0 1 N N N N N N -30.912 -0.988 -26.965 3.583 -0.663 -0.170 C3 F3D 5 F3D C4 C4 C 0 1 Y N N N N N -31.576 -1.571 -25.821 2.208 -0.129 -0.276 C4 F3D 6 F3D C5 C5 C 0 1 Y N N N N N -32.716 -2.337 -26.013 1.377 -0.536 -1.321 C5 F3D 7 F3D O1 O1 O 0 1 N N N N N N -32.854 -6.268 -16.506 -8.543 -1.153 0.397 O1 F3D 8 F3D C6 C6 C 0 1 Y N N N N N -33.346 -2.941 -24.953 0.096 -0.037 -1.416 C6 F3D 9 F3D C7 C7 C 0 1 Y N N N N N -32.931 -2.828 -23.606 -0.369 0.870 -0.473 C7 F3D 10 F3D C8 C8 C 0 1 N N N N N N -33.968 -2.912 -21.319 -2.047 2.288 0.434 C8 F3D 11 F3D C9 C9 C 0 1 N N N N N N -33.880 -3.971 -20.201 -3.488 2.725 0.161 C9 F3D 12 F3D C10 C10 C 0 1 N N N N N N -34.922 -6.016 -19.257 -5.780 1.954 0.051 C10 F3D 13 F3D C11 C11 C 0 1 N N N N N N -35.353 -5.877 -17.770 -6.683 0.729 0.210 C11 F3D 14 F3D C12 C12 C 0 1 N N N N N N -35.049 -7.181 -16.963 -8.136 1.127 -0.056 C12 F3D 15 F3D C13 C13 C 0 1 N N N N N N -33.572 -7.280 -16.439 -9.025 -0.080 0.101 C13 F3D 16 F3D C14 C14 C 0 1 N N N N N N -31.757 -8.670 -15.418 -10.936 1.330 -0.444 C14 F3D 17 F3D C15 C15 C 0 1 N N N N N N -34.052 -9.678 -15.845 -11.218 -1.139 0.066 C15 F3D 18 F3D N N3 N 0 1 N N N N N N -35.113 -4.767 -20.077 -4.385 1.571 0.306 N F3D 19 F3D O O2 O 0 1 N N N N N N -33.628 -3.438 -22.615 -1.633 1.359 -0.569 O F3D 20 F3D C16 C16 C 0 1 Y N N N N N -31.808 -2.034 -23.361 0.454 1.277 0.569 C16 F3D 21 F3D C17 C17 C 0 1 Y N N N N N -31.193 -1.439 -24.491 1.734 0.779 0.674 C17 F3D 22 F3D C C18 C 0 1 N N N N N N -30.637 1.765 -29.329 5.459 -2.569 1.791 C F3D 23 F3D C25 C19 C 0 1 Y N N N N N -32.998 0.213 -27.849 2.637 -2.906 0.090 C25 F3D 24 F3D C30 C20 C 0 1 Y N N N N N -33.365 0.936 -26.711 2.517 -3.908 -0.878 C30 F3D 25 F3D C29 C21 C 0 1 Y N N N N N -34.690 1.361 -26.567 1.440 -4.768 -0.844 C29 F3D 26 F3D C28 C22 C 0 1 Y N N N N N -35.675 1.129 -27.541 0.479 -4.642 0.144 C28 F3D 27 F3D C27 C23 C 0 1 Y N N N N N -35.325 0.411 -28.672 0.590 -3.652 1.105 C27 F3D 28 F3D C26 C24 C 0 1 Y N N N N N -33.978 -0.006 -28.824 1.665 -2.788 1.089 C26 F3D 29 F3D C18 C25 C 0 1 Y N N N N N -29.505 -1.235 -27.034 4.742 0.245 -0.317 C18 F3D 30 F3D C24 C26 C 0 1 Y N N N N N -28.537 -0.271 -27.221 4.996 1.207 0.652 C24 F3D 31 F3D C23 C27 C 0 1 Y N N N N N -27.228 -0.570 -27.214 6.093 2.059 0.503 C23 F3D 32 F3D C22 C28 C 0 1 Y N N N N N -26.193 0.220 -27.386 6.643 3.151 1.302 C22 F3D 33 F3D N3 N4 N 0 1 Y N N N N N -25.057 -0.443 -27.233 7.695 3.605 0.683 N3 F3D 34 F3D C21 C29 C 0 1 Y N N N N N -26.714 -1.801 -26.875 6.928 1.934 -0.625 C21 F3D 35 F3D C20 C30 C 0 1 Y N N N N N -27.612 -2.770 -26.637 6.654 0.961 -1.585 C20 F3D 36 F3D C19 C31 C 0 1 Y N N N N N -28.975 -2.498 -26.666 5.582 0.133 -1.434 C19 F3D 37 F3D H1 H1 H 0 1 N N N N N N -31.646 0.023 -30.115 5.264 -3.506 -0.139 H1 F3D 38 F3D H2 H2 H 0 1 N N N N N N -30.035 -0.310 -29.392 5.897 -1.843 -0.189 H2 F3D 39 F3D H3 H3 H 0 1 N N N N N N -24.703 -2.470 -26.614 8.627 3.039 -1.128 H3 F3D 40 F3D H4 H4 H 0 1 N N N N N N -33.114 -2.460 -27.010 1.739 -1.241 -2.056 H4 F3D 41 F3D H5 H5 H 0 1 N N N N N N -34.218 -3.543 -25.162 -0.547 -0.351 -2.225 H5 F3D 42 F3D H6 H6 H 0 1 N N N N N N -33.276 -2.091 -21.080 -1.393 3.160 0.415 H6 F3D 43 F3D H7 H7 H 0 1 N N N N N N -34.997 -2.525 -21.356 -1.991 1.814 1.414 H7 F3D 44 F3D H8 H8 H 0 1 N N N N N N -33.043 -4.650 -20.424 -3.774 3.499 0.873 H8 F3D 45 F3D H9 H9 H 0 1 N N N N N N -33.693 -3.460 -19.245 -3.562 3.119 -0.852 H9 F3D 46 F3D H10 H10 H 0 1 N N N N N N -35.515 -6.822 -19.714 -5.871 2.342 -0.964 H10 F3D 47 F3D H11 H11 H 0 1 N N N N N N -33.856 -6.285 -19.283 -6.082 2.723 0.762 H11 F3D 48 F3D H12 H12 H 0 1 N N N N N N -34.805 -5.039 -17.315 -6.381 -0.040 -0.501 H12 F3D 49 F3D H13 H13 H 0 1 N N N N N N -36.433 -5.674 -17.728 -6.592 0.340 1.225 H13 F3D 50 F3D H14 H14 H 0 1 N N N N N N -35.726 -7.217 -16.097 -8.438 1.896 0.655 H14 F3D 51 F3D H15 H15 H 0 1 N N N N N N -35.243 -8.045 -17.616 -8.226 1.515 -1.071 H15 F3D 52 F3D H16 H16 H 0 1 N N N N N N -31.618 -9.694 -15.041 -12.015 1.226 -0.553 H16 F3D 53 F3D H17 H17 H 0 1 N N N N N N -31.054 -8.486 -16.244 -10.718 2.055 0.341 H17 F3D 54 F3D H18 H18 H 0 1 N N N N N N -31.566 -7.952 -14.607 -10.507 1.674 -1.385 H18 F3D 55 F3D H19 H19 H 0 1 N N N N N N -33.519 -10.528 -15.394 -11.311 -1.650 -0.892 H19 F3D 56 F3D H20 H20 H 0 1 N N N N N N -34.932 -9.431 -15.233 -10.783 -1.818 0.799 H20 F3D 57 F3D H21 H21 H 0 1 N N N N N N -34.375 -9.946 -16.862 -12.205 -0.823 0.405 H21 F3D 58 F3D H22 H22 H 0 1 N N N N N N -35.815 -4.203 -19.642 -4.102 0.814 -0.298 H22 F3D 59 F3D H24 H24 H 0 1 N N N N N N -31.428 -1.881 -22.362 0.088 1.983 1.301 H24 F3D 60 F3D H25 H25 H 0 1 N N N N N N -30.333 -0.815 -24.298 2.372 1.093 1.487 H25 F3D 61 F3D H26 H26 H 0 1 N N N N N N -30.157 2.005 -30.289 5.286 -1.589 2.234 H26 F3D 62 F3D H27 H27 H 0 1 N N N N N N -31.564 2.348 -29.227 4.797 -3.300 2.255 H27 F3D 63 F3D H28 H28 H 0 1 N N N N N N -29.953 2.016 -28.505 6.496 -2.864 1.954 H28 F3D 64 F3D H29 H29 H 0 1 N N N N N N -32.633 1.164 -25.950 3.265 -4.008 -1.650 H29 F3D 65 F3D H30 H30 H 0 1 N N N N N N -34.968 1.891 -25.668 1.345 -5.543 -1.591 H30 F3D 66 F3D H31 H31 H 0 1 N N N N N N -36.680 1.501 -27.411 -0.363 -5.319 0.165 H31 F3D 67 F3D H32 H32 H 0 1 N N N N N N -36.063 0.173 -29.424 -0.164 -3.560 1.873 H32 F3D 68 F3D H33 H33 H 0 1 N N N N N N -33.696 -0.516 -29.733 1.750 -2.017 1.840 H33 F3D 69 F3D H34 H34 H 0 1 N N N N N N -28.840 0.754 -27.378 4.351 1.295 1.514 H34 F3D 70 F3D H35 H35 H 0 1 N N N N N N -26.260 1.272 -27.621 6.246 3.518 2.237 H35 F3D 71 F3D H36 H36 H 0 1 N N N N N N -27.272 -3.772 -26.421 7.292 0.864 -2.451 H36 F3D 72 F3D H37 H37 H 0 1 N N N N N N -29.663 -3.286 -26.396 5.377 -0.618 -2.182 H37 F3D 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F3D C C1 SING N N 1 F3D C1 C2 SING N N 2 F3D C26 C27 DOUB Y N 3 F3D C26 C25 SING Y N 4 F3D C27 C28 SING Y N 5 F3D C2 C25 SING N N 6 F3D C2 C3 DOUB N E 7 F3D C25 C30 DOUB Y N 8 F3D C28 C29 DOUB Y N 9 F3D C22 N3 DOUB Y N 10 F3D C22 C23 SING Y N 11 F3D N3 N2 SING Y N 12 F3D C24 C23 DOUB Y N 13 F3D C24 C18 SING Y N 14 F3D C23 C21 SING Y N 15 F3D C18 C3 SING N N 16 F3D C18 C19 DOUB Y N 17 F3D C3 C4 SING N N 18 F3D C21 N2 SING Y N 19 F3D C21 C20 DOUB Y N 20 F3D C30 C29 SING Y N 21 F3D C19 C20 SING Y N 22 F3D C5 C4 DOUB Y N 23 F3D C5 C6 SING Y N 24 F3D C4 C17 SING Y N 25 F3D C6 C7 DOUB Y N 26 F3D C17 C16 DOUB Y N 27 F3D C7 C16 SING Y N 28 F3D C7 O SING N N 29 F3D O C8 SING N N 30 F3D C8 C9 SING N N 31 F3D C9 N SING N N 32 F3D N C10 SING N N 33 F3D C10 C11 SING N N 34 F3D C11 C12 SING N N 35 F3D C12 C13 SING N N 36 F3D O1 C13 DOUB N N 37 F3D C13 N1 SING N N 38 F3D N1 C15 SING N N 39 F3D N1 C14 SING N N 40 F3D C1 H1 SING N N 41 F3D C1 H2 SING N N 42 F3D N2 H3 SING N N 43 F3D C5 H4 SING N N 44 F3D C6 H5 SING N N 45 F3D C8 H6 SING N N 46 F3D C8 H7 SING N N 47 F3D C9 H8 SING N N 48 F3D C9 H9 SING N N 49 F3D C10 H10 SING N N 50 F3D C10 H11 SING N N 51 F3D C11 H12 SING N N 52 F3D C11 H13 SING N N 53 F3D C12 H14 SING N N 54 F3D C12 H15 SING N N 55 F3D C14 H16 SING N N 56 F3D C14 H17 SING N N 57 F3D C14 H18 SING N N 58 F3D C15 H19 SING N N 59 F3D C15 H20 SING N N 60 F3D C15 H21 SING N N 61 F3D N H22 SING N N 62 F3D C16 H24 SING N N 63 F3D C17 H25 SING N N 64 F3D C H26 SING N N 65 F3D C H27 SING N N 66 F3D C H28 SING N N 67 F3D C30 H29 SING N N 68 F3D C29 H30 SING N N 69 F3D C28 H31 SING N N 70 F3D C27 H32 SING N N 71 F3D C26 H33 SING N N 72 F3D C24 H34 SING N N 73 F3D C22 H35 SING N N 74 F3D C20 H36 SING N N 75 F3D C19 H37 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F3D SMILES ACDLabs 12.01 "C(/C(c1ccccc1)=C(/c2ccc(cc2)OCCNCCCC(N(C)C)=O)c3ccc4nncc4c3)C" F3D InChI InChI 1.03 "InChI=1S/C31H36N4O2/c1-4-28(23-9-6-5-7-10-23)31(25-14-17-29-26(21-25)22-33-34-29)24-12-15-27(16-13-24)37-20-19-32-18-8-11-30(36)35(2)3/h5-7,9-10,12-17,21-22,32H,4,8,11,18-20H2,1-3H3,(H,33,34)/b31-28+" F3D InChIKey InChI 1.03 MWRRXSSGLMVYRJ-CCFHIKDMSA-N F3D SMILES_CANONICAL CACTVS 3.385 "CC\C(c1ccccc1)=C(\c2ccc(OCCNCCCC(=O)N(C)C)cc2)c3ccc4[nH]ncc4c3" F3D SMILES CACTVS 3.385 "CCC(c1ccccc1)=C(c2ccc(OCCNCCCC(=O)N(C)C)cc2)c3ccc4[nH]ncc4c3" F3D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC/C(=C(/c1ccc(cc1)OCCNCCCC(=O)N(C)C)\c2ccc3c(c2)cn[nH]3)/c4ccccc4" F3D SMILES "OpenEye OEToolkits" 2.0.6 "CCC(=C(c1ccc(cc1)OCCNCCCC(=O)N(C)C)c2ccc3c(c2)cn[nH]3)c4ccccc4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier F3D "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide" F3D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[2-[4-[(~{E})-1-(1~{H}-indazol-5-yl)-2-phenyl-but-1-enyl]phenoxy]ethylamino]-~{N},~{N}-dimethyl-butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F3D "Create component" 2018-02-26 RCSB F3D "Initial release" 2018-03-21 RCSB F3D "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id F3D _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C11 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #