data_F3T # _chem_comp.id F3T _chem_comp.name "4-amino-2,4,5-trideoxy-5,5,5-trifluoro-L-threo-pentonic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H8 F3 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-09 _chem_comp.pdbx_modified_date 2012-01-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 187.117 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F3T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1XE6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F3T N N N 0 1 N N N 55.475 13.821 10.539 -0.879 1.855 -0.482 N F3T 1 F3T C1 C1 C 0 1 N N N 52.742 12.342 9.374 2.927 -0.054 0.182 C1 F3T 2 F3T F1 F1 F 0 1 N N N 54.873 16.126 11.589 -2.072 -0.629 -1.130 F1 F3T 3 F3T O1 O1 O 0 1 N Y N 51.527 12.590 9.140 4.133 0.515 0.332 O1 F3T 4 F3T C2 C2 C 0 1 N N N 53.188 12.043 10.803 1.678 0.773 0.349 C2 F3T 5 F3T F2 F2 F 0 1 N N N 54.004 15.364 13.396 -3.207 0.551 0.463 F2 F3T 6 F3T O2 O2 O 0 1 N N N 53.611 12.324 8.464 2.842 -1.229 -0.087 O2 F3T 7 F3T C3 C3 C 0 1 N N S 53.350 13.304 11.679 0.448 -0.111 0.127 C3 F3T 8 F3T F3 F3 F 0 1 N N N 56.137 15.211 13.061 -1.990 -1.291 1.055 F3 F3T 9 F3T O3 O3 O 0 1 N N N 52.516 14.387 11.236 0.424 -0.562 -1.229 O3 F3T 10 F3T C4 C4 C 0 1 N N R 54.814 13.759 11.831 -0.819 0.696 0.419 C4 F3T 11 F3T C5 C5 C 0 1 N N N 54.949 15.149 12.488 -2.048 -0.187 0.197 C5 F3T 12 F3T HN HN H 0 1 N N N 56.422 14.118 10.662 -0.897 1.562 -1.447 HN F3T 13 F3T HNA HNA H 0 1 N N N 55.462 12.916 10.114 -1.673 2.439 -0.266 HNA F3T 14 F3T HO1 HO1 H 0 1 N Y N 51.409 12.748 8.211 4.905 -0.055 0.215 HO1 F3T 15 F3T H2 H2 H 0 1 N N N 52.429 11.398 11.270 1.649 1.188 1.356 H2 F3T 16 F3T H2A H2A H 0 1 N N N 54.161 11.532 10.757 1.678 1.584 -0.379 H2A F3T 17 F3T H3 H3 H 0 1 N N N 53.008 13.004 12.681 0.493 -0.970 0.795 H3 F3T 18 F3T HO3 HO3 H 0 1 N N N 52.647 15.140 11.801 0.384 0.152 -1.880 HO3 F3T 19 F3T H4 H4 H 0 1 N N N 55.286 13.009 12.482 -0.800 1.040 1.453 H4 F3T 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F3T N C4 SING N N 1 F3T C1 O1 SING N N 2 F3T C1 C2 SING N N 3 F3T C1 O2 DOUB N N 4 F3T F1 C5 SING N N 5 F3T C2 C3 SING N N 6 F3T F2 C5 SING N N 7 F3T C3 O3 SING N N 8 F3T C3 C4 SING N N 9 F3T F3 C5 SING N N 10 F3T C4 C5 SING N N 11 F3T N HN SING N N 12 F3T N HNA SING N N 13 F3T O1 HO1 SING N N 14 F3T C2 H2 SING N N 15 F3T C2 H2A SING N N 16 F3T C3 H3 SING N N 17 F3T O3 HO3 SING N N 18 F3T C4 H4 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F3T SMILES ACDLabs 11.02 "FC(F)(F)C(N)C(O)CC(=O)O" F3T SMILES_CANONICAL CACTVS 3.352 "N[C@H]([C@@H](O)CC(O)=O)C(F)(F)F" F3T SMILES CACTVS 3.352 "N[CH]([CH](O)CC(O)=O)C(F)(F)F" F3T SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C([C@@H]([C@H](C(F)(F)F)N)O)C(=O)O" F3T SMILES "OpenEye OEToolkits" 1.7.0 "C(C(C(C(F)(F)F)N)O)C(=O)O" F3T InChI InChI 1.03 "InChI=1S/C5H8F3NO3/c6-5(7,8)4(9)2(10)1-3(11)12/h2,4,10H,1,9H2,(H,11,12)/t2-,4+/m0/s1" F3T InChIKey InChI 1.03 RLFDKCZBPFUOAZ-ZAFYKAAXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier F3T "SYSTEMATIC NAME" ACDLabs 11.02 "4-amino-2,4,5-trideoxy-5,5,5-trifluoro-L-threo-pentonic acid" F3T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(3S,4R)-4-azanyl-5,5,5-trifluoro-3-hydroxy-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F3T "Create component" 2009-07-09 PDBJ F3T "Modify descriptor" 2011-06-04 RCSB #